Detailed infomation of each circRNA
General Information | |
---|---|
CircRNA Name | AT5G40910_circ_g.1 |
ID in PlantcircBase | ath_circ_041795 |
Alias | NA |
Organism | Arabidpsis thaliana |
Position | chr5: 16395537-16399921 JBrowse» |
Reference genome | TAIR10.38 |
Type | u-circRNA |
Identification method | CIRI |
Parent gene | AT5G40910 |
Parent gene annotation |
Disease resistance protein (TIR-NBS-LRR class) family |
Parent gene strand | + |
Alternative splicing | AT5G40910_circ_g.2 5_circ_igg.3 5_circ_igg.4 |
Support reads | 2 |
Tissues | root |
Exon boundary | Yes-No |
Splicing signals | GT-AG |
Number of exons covered | AT5G40910.5:3 AT5G40910.3:3 AT5G40910.8:5 AT5G40910.6:4 AT5G40910.7:6 AT5G40910.4:4 AT5G40910.9:4 AT5G40910.2:6 AT5G40910.1:4 |
Conservation Information | |
---|---|
Conserved circRNAs | NA |
PMCS | 0.495185162 |
Functional Information | |
---|---|
Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
---|---|
References | Chu et al., 2017 |