Detailed infomation of each circRNA
| General Information | |
|---|---|
| CircRNA Name | AT5G40910_circ_g.1 |
| ID in PlantcircBase | ath_circ_041795 |
| Alias | NA |
| Organism | Arabidpsis thaliana |
| Position | chr5: 16395537-16399921 JBrowse» |
| Reference genome | TAIR10.38 |
| Type | u-circRNA |
| Identification method | CIRI |
| Parent gene | AT5G40910 |
| Parent gene annotation |
Disease resistance protein (TIR-NBS-LRR class) family |
| Parent gene strand | + |
| Alternative splicing | AT5G40910_circ_g.2 5_circ_igg.3 5_circ_igg.4 |
| Support reads | 2 |
| Tissues | root |
| Exon boundary | Yes-No |
| Splicing signals | GT-AG |
| Number of exons covered | AT5G40910.5:3 AT5G40910.3:3 AT5G40910.8:5 AT5G40910.6:4 AT5G40910.7:6 AT5G40910.4:4 AT5G40910.9:4 AT5G40910.2:6 AT5G40910.1:4 |
| Conservation Information | |
|---|---|
| Conserved circRNAs | NA |
| PMCS | 0.495185162 |
| Functional Information | |
|---|---|
| Coding potential | N |
| Potential coding position |
NA |
| Potential amino acid sequence |
NA |
| Sponge-miRNAs | NA |
| circRNA-miRNA-mRNA network | VISUALIZATION |
| Potential function description | NA |
| Other Information | |
|---|---|
| References | Chu et al., 2017 |