Plant Circular RNA Database

Detail information of AT4G25610_circ_g.4

			
						 General Information
					
						CircRNA Name
						AT4G25610_circ_g.4
					
						ID in PlantcircBase
						ath_circ_032784
					
						Alias
						NA
					
						Organism
						
							Arabidpsis thaliana						
					
						Position
						
							chr4: 13063792-13066827  JBrowse»						
					
						Reference genome
						
							TAIR10.38						
					
						Type  
						
							ue-circRNA							
									
						Identification method
						CIRCexplorer
					
						Parent gene
						
							AT4G25610						
					
						Parent gene annotation
						
							C2H2-like zinc finger protein
							
						Parent gene strand
						+
					
						Alternative splicing
						
							AT4G25610_circ_g.2 AT4G25610_circ_g.3 AT4G25610_circ_g.5 AT4G25610_circ_g.6 						
					
						Support reads
						1
					
						Tissues
						root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						AT4G25610.2:10
AT4G25610.1:9
AT4G25610.3:9

General Information
CircRNA Name	AT4G25610_circ_g.4
ID in PlantcircBase	ath_circ_032784
Alias	NA
Organism	Arabidpsis thaliana
Position	chr4: 13063792-13066827 JBrowse»
Reference genome	TAIR10.38
Type	ue-circRNA
Identification method	CIRCexplorer
Parent gene	AT4G25610
Parent gene annotation	C2H2-like zinc finger protein
Parent gene strand	+
Alternative splicing	AT4G25610_circ_g.2 AT4G25610_circ_g.3 AT4G25610_circ_g.5 AT4G25610_circ_g.6
Support reads	1
Tissues	root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	AT4G25610.2:10 AT4G25610.1:9 AT4G25610.3:9

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							TCAGGAAACCGACATCTCAGGCAACAACACTCACGAGTCCTCAAATGGTGTTATAACCGCAAGA
TCAAAGCTGAGGACGAAAGCCGAAAAGGGCACAAAGtcgaattcaatggagcttgtgaaacaag
atgggaatgattctctcgatatgcttatcagacgtgcggttggaaaggatccgtttctttcctt
ccctagac

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 1671
Transcript exons: 13063792-13063945,13064168-13064295,13064402-13064446,13
064533-13064586,13065064-13065168,13065270-13065473,1306
5597-13065682,13065774-13066588,13066693-13066763,130668
19-13066827
TCGAATTCAATGGAGCTTGTGAAACAAGATGGGAATGATTCTCTCGATATGCTTATCAGACGTG
CGGTTGGAAAGGATCCGTTTCTTTCCTTCCCTAGACCTGAAAATACTCCTGTCCAGCTTTTTCA
ACTTCTCCATACCTTAGAACGTCCAGGCTGGCCATTGCTGACCCCTTTGAAGATACAAATGCAG
AAGTGTGAAAAGTGCAGTAGGGAGTTTTGCTCTCCTGTGAACTTTAGAAGACATAACCGCATGC
ATCGCCGTCAAAGAAAGCCGGAAAAGGATTTTGGCAAAGAGAGGGATGCGCTGGGAGCCTTTTG
GAATAAGCTCTCTGCAACTGATGCAAAGGAGATTCTCTCAGTAAAGAGCATGATGCTTGAGGAT
ATTCCTGGGGCATCAGTGGAGTCAGGATTAATGTCACTTATCGAAAAACCAGGCTATACTGCTC
TGCCACAATATTATCTAAGAGCTGGTTCTGGCCTTTTGGATCTTCTCCAGGCTAGACCACCTAG
ACTTCCAATTTCTTCGCAGGAACTTTTTAGCATTCTTGATGATGCAAGTGAAAAAACTTTCCTG
TCTAGCGAGGCTGCACCAATGCAAAAGTACATTTTTGACGGGGAAATAGGAAAAACTGTACTGG
AGGCAAAAAATGTTGTTGCTTGCGCAAGCTTCCTTCTGGAACAGCGATTGATTAAAGCATGGCT
TGCTGACAAAGATGCTGAAGCTCTGAGGTGCCAAAATTTACTGGTTGAAGAGGAAGAAGCTGCT
CGAAGAAGAAAAGCTGAGCTCTTGGAGAGGAAGAAGAGGAAGAAGCTAAGGCAGAAAGAGCAGA
GAGAGAAGGACCAGAAAAAAGATGCTAAGGAAGACGAGAGCACCACATCAGAGGAACAACAATA
TCCAGCTGAGCCATCAAGCCCTTTATCTGTAGCTTCTGATTCTGAGGCACAGACACCAGATTCC
TTACCAATTGATGATTCTTCATCCCTCGAGGAACCTCAAGTTTTGGAAACTAATAATGGAAGAA
ACAGTGAAACGCAAGTGCCAATGGTTGATGGCTTAGACAATGGCCAAAACATGGAAAGGCGAAG
TGGCCGTAGGCAAATGCAAAGATCACAACAGGGAATGCCGAATGGGTTCCATGCTGATCATGCA
CCAAACCTTGGAGGCATGCGAAAGAATGGAACCAACAGAGACGCAAGAGCCAATACTACTAAAG
TTTGGAGCCGAAAATCCGATAACCCCAAATTGATATCACAACATGCAGCAGTGACTCAGCAGGA
TCAGACAAAGAGCAGCGAATTTATAGTTGGATCGTTGAGTGTATCAATCCGAAACAGTGGCGAA
CATAACCAAACCAAATGCAGTGAAGGGGAGAGAAGAACAAAGACTGTTGAGGTGAAACCCGCAT
CTGAGCAATCAACTGTAAAAATATGGAGACCAGTGAGCAGTCAGGGAAGAAAAACCTCAACAGT
CAATGGAAACACAGACAAAGAAGATAAGAGATCAAACCCAACTACACCCGAAGTGAAAAACGCT
CATCACATAAGCTTGCAGTTTAACAACCACGAAGCAAAGGCGTTTCTTGCAAAGAGCAACCTCT
GCAGAACACGTGACATTGGTTCTGTCTCAGGAAACCGACATCTCAGGCAACAACACTCACGAGG
CACAAAG
						
					

						Genomic sequence
						
							TCGAATTCAATGGAGCTTGTGAAACAAGATGGGAATGATTCTCTCGATATGCTTATCAGACGTG
CGGTTGGAAAGGATCCGTTTCTTTCCTTCCCTAGACCTGAAAATACTCCTGTCCAGCTTTTTCA
ACTTCTCCATACCTTAGAACGTCCAGGTAATGTCTCATTGTCTCTCATCTTTTTTTGGATTTGA
CATTTTCACTGACCAAATACTTTGGAATTTGGTGGATTGAGTACTCTGTGGATATATCGTTTTG
GTCTCGAGGGGTTTATCATATTAGCTTATTGAGTTTTTTTTAGATCCAAGTGATGCTTGAATTA
CATGTGGCCTAGGGTATGGTACATGGACTTTATTTGATGTTCTATTTCGTTCCCAGGCTGGCCA
TTGCTGACCCCTTTGAAGATACAAATGCAGAAGTGTGAAAAGTGCAGTAGGGAGTTTTGCTCTC
CTGTGAACTTTAGAAGACATAACCGCATGCATCGCCGTCAAAGAAAGCCGGAAAAGGTTTGCTT
AGTCTGAGCTTAACTATACTTTCTTCCTTTTATGTCTTTACTGGTTGCTTTACTCTTTTCTTTG
AAGTCATCTGAAGTTTGTGTTTAAATGTTACCAGGATTTTGGCAAAGAGAGGGATGCGCTGGGA
GCCTTTTGGAATAAGGTAGTTTTCCCTCTAGTAGTCTTCTCACAGTTATTGCCAATTCGATTAG
TTTTTCCATCAGGTACTGATCTCTGTTGTTATTTCAGCTCTCTGCAACTGATGCAAAGGAGATT
CTCTCAGTAAAGAGCATGATGCTTGAGGTACTATGATTCCCATTGATGCTTTCCCTTTTACCTT
TATCTTAACTTAAAACGCATGGTGATCCTCACATACGAGTGTGGCATAACATGTTCTTCAGGCC
CAATTCTAATTTCATTGTTGTTTGTCACATCTTGTCTAAGGGTTTGACTTTTTATGAATGCTTT
ATCGCTCTTTTTTCTTCATTAGTGAAAGGTGTGATACATAATAAGCATTGTCATAAATGTTTCC
TAGAATGCCATATGACTTCATCAGGGTTATGGGATTCGTTTCCAAATAAATACTTTTTCATTAA
ACAAAAGTAAGAGTATACCATACCAGATTCGTATACATACACTCACAGGCTTGTTGAGTATGCA
TATCTGATCCATGATGTACCTTTCTTACCTTCTTTTCTCTCGCATTATGCATCATGGACCTGTG
TCCTGATTAAAATGATTTGTAGACTAACTCGAGATGCTTTGTTTGGATTCTTGTAGGATATTCC
TGGGGCATCAGTGGAGTCAGGATTAATGTCACTTATCGAAAAACCAGGCTATACTGCTCTGCCA
CAATATTATCTAAGAGCTGGTTCTGGCCTTTTGGTATGAATTGCATCTCTCTCTTGACGGTTTC
TTTTTCCCTGTCTAGATAAACTATCCTCAATGTTCAACCTCATGGCTGATATATGTTCCTCTTT
CTCCAGGATCTTCTCCAGGCTAGACCACCTAGACTTCCAATTTCTTCGCAGGAACTTTTTAGCA
TTCTTGATGATGCAAGTGAAAAAACTTTCCTGTCTAGCGAGGCTGCACCAATGCAAAAGTACAT
TTTTGACGGGGAAATAGGAAAAACTGTACTGGAGGCAAAAAATGTTGTTGCTTGCGCAAGCTTC
CTTCTGGAACAGCGATTGGTAAATTTTTCCTTCAAAGTTTCACCATTCCTCTCTAGTTGGTAAA
GCGAAGTGTCTAATACGAGAACTTTACTTTTCATGTATCCATTACACGCGATTTATCTTTATAT
TCTTAATGTGAAGATTAAAGCATGGCTTGCTGACAAAGATGCTGAAGCTCTGAGGTGCCAAAAT
TTACTGGTTGAAGAGGAAGAAGCTGCTCGAAGAAGGTAAGTGCTTATTAATTGCAATGCCAGTA
ATATAACGTTGCTGAATCCACTAAGTGTTGAGTCTAATTCACTGGTATTATGTTCGGAGCAGAA
AAGCTGAGCTCTTGGAGAGGAAGAAGAGGAAGAAGCTAAGGCAGAAAGAGCAGAGAGAGAAGGA
CCAGAAAAAAGATGCTAAGGAAGACGAGAGCACCACATCAGAGGAACAACAATATCCAGCTGAG
CCATCAAGCCCTTTATCTGTAGCTTCTGATTCTGAGGCACAGACACCAGATTCCTTACCAATTG
ATGATTCTTCATCCCTCGAGGAACCTCAAGTTTTGGAAACTAATAATGGAAGAAACAGTGAAAC
GCAAGTGCCAATGGTTGATGGCTTAGACAATGGCCAAAACATGGAAAGGCGAAGTGGCCGTAGG
CAAATGCAAAGATCACAACAGGGAATGCCGAATGGGTTCCATGCTGATCATGCACCAAACCTTG
GAGGCATGCGAAAGAATGGAACCAACAGAGACGCAAGAGCCAATACTACTAAAGTTTGGAGCCG
AAAATCCGATAACCCCAAATTGATATCACAACATGCAGCAGTGACTCAGCAGGATCAGACAAAG
AGCAGCGAATTTATAGTTGGATCGTTGAGTGTATCAATCCGAAACAGTGGCGAACATAACCAAA
CCAAATGCAGTGAAGGGGAGAGAAGAACAAAGACTGTTGAGGTGAAACCCGCATCTGAGCAATC
AACTGTAAAAATATGGAGACCAGTGAGCAGTCAGGGAAGAAAAACCTCAACAGTCAATGGAAAC
ACAGACAAAGAAGATAAGAGATCAAACCCAACTACACCCGAAGTGAAAAACGCTCATCACATAA
GCTTGCAGTTTAACAACCACGAAGCAAAGGCGTTTCTTGCAAAGAGTAAACCTTCTTTTACCCT
TTCTTTTTATCTTAATCTCCCTATCGTTTATATTTTGGAAGTTGTTTACTCAATCTGAATAAAT
GGCTTGTCAGGATGGAAAGAGGCAACCTCTGCAGAACACGTGACATTGGTTCTGTCTCAGGAAA
CCGACATCTCAGGCAACAACACTCACGAGTCCTCAAATGGTGTTATAACCGCAAGATCAAAGCT
GAGGACGAAAGCCGAAAAGGGCACAAAG
						
					

			
		

Sequences
Splice junction sequence	TCAGGAAACCGACATCTCAGGCAACAACACTCACGAGTCCTCAAATGGTGTTATAACCGCAAGA TCAAAGCTGAGGACGAAAGCCGAAAAGGGCACAAAGtcgaattcaatggagcttgtgaaacaag atgggaatgattctctcgatatgcttatcagacgtgcggttggaaaggatccgtttctttcctt ccctagac
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 1671 Transcript exons: 13063792-13063945,13064168-13064295,13064402-13064446,13 064533-13064586,13065064-13065168,13065270-13065473,1306 5597-13065682,13065774-13066588,13066693-13066763,130668 19-13066827 TCGAATTCAATGGAGCTTGTGAAACAAGATGGGAATGATTCTCTCGATATGCTTATCAGACGTG CGGTTGGAAAGGATCCGTTTCTTTCCTTCCCTAGACCTGAAAATACTCCTGTCCAGCTTTTTCA ACTTCTCCATACCTTAGAACGTCCAGGCTGGCCATTGCTGACCCCTTTGAAGATACAAATGCAG AAGTGTGAAAAGTGCAGTAGGGAGTTTTGCTCTCCTGTGAACTTTAGAAGACATAACCGCATGC ATCGCCGTCAAAGAAAGCCGGAAAAGGATTTTGGCAAAGAGAGGGATGCGCTGGGAGCCTTTTG GAATAAGCTCTCTGCAACTGATGCAAAGGAGATTCTCTCAGTAAAGAGCATGATGCTTGAGGAT ATTCCTGGGGCATCAGTGGAGTCAGGATTAATGTCACTTATCGAAAAACCAGGCTATACTGCTC TGCCACAATATTATCTAAGAGCTGGTTCTGGCCTTTTGGATCTTCTCCAGGCTAGACCACCTAG ACTTCCAATTTCTTCGCAGGAACTTTTTAGCATTCTTGATGATGCAAGTGAAAAAACTTTCCTG TCTAGCGAGGCTGCACCAATGCAAAAGTACATTTTTGACGGGGAAATAGGAAAAACTGTACTGG AGGCAAAAAATGTTGTTGCTTGCGCAAGCTTCCTTCTGGAACAGCGATTGATTAAAGCATGGCT TGCTGACAAAGATGCTGAAGCTCTGAGGTGCCAAAATTTACTGGTTGAAGAGGAAGAAGCTGCT CGAAGAAGAAAAGCTGAGCTCTTGGAGAGGAAGAAGAGGAAGAAGCTAAGGCAGAAAGAGCAGA GAGAGAAGGACCAGAAAAAAGATGCTAAGGAAGACGAGAGCACCACATCAGAGGAACAACAATA TCCAGCTGAGCCATCAAGCCCTTTATCTGTAGCTTCTGATTCTGAGGCACAGACACCAGATTCC TTACCAATTGATGATTCTTCATCCCTCGAGGAACCTCAAGTTTTGGAAACTAATAATGGAAGAA ACAGTGAAACGCAAGTGCCAATGGTTGATGGCTTAGACAATGGCCAAAACATGGAAAGGCGAAG TGGCCGTAGGCAAATGCAAAGATCACAACAGGGAATGCCGAATGGGTTCCATGCTGATCATGCA CCAAACCTTGGAGGCATGCGAAAGAATGGAACCAACAGAGACGCAAGAGCCAATACTACTAAAG TTTGGAGCCGAAAATCCGATAACCCCAAATTGATATCACAACATGCAGCAGTGACTCAGCAGGA TCAGACAAAGAGCAGCGAATTTATAGTTGGATCGTTGAGTGTATCAATCCGAAACAGTGGCGAA CATAACCAAACCAAATGCAGTGAAGGGGAGAGAAGAACAAAGACTGTTGAGGTGAAACCCGCAT CTGAGCAATCAACTGTAAAAATATGGAGACCAGTGAGCAGTCAGGGAAGAAAAACCTCAACAGT CAATGGAAACACAGACAAAGAAGATAAGAGATCAAACCCAACTACACCCGAAGTGAAAAACGCT CATCACATAAGCTTGCAGTTTAACAACCACGAAGCAAAGGCGTTTCTTGCAAAGAGCAACCTCT GCAGAACACGTGACATTGGTTCTGTCTCAGGAAACCGACATCTCAGGCAACAACACTCACGAGG CACAAAG
Genomic sequence	TCGAATTCAATGGAGCTTGTGAAACAAGATGGGAATGATTCTCTCGATATGCTTATCAGACGTG CGGTTGGAAAGGATCCGTTTCTTTCCTTCCCTAGACCTGAAAATACTCCTGTCCAGCTTTTTCA ACTTCTCCATACCTTAGAACGTCCAGGTAATGTCTCATTGTCTCTCATCTTTTTTTGGATTTGA CATTTTCACTGACCAAATACTTTGGAATTTGGTGGATTGAGTACTCTGTGGATATATCGTTTTG GTCTCGAGGGGTTTATCATATTAGCTTATTGAGTTTTTTTTAGATCCAAGTGATGCTTGAATTA CATGTGGCCTAGGGTATGGTACATGGACTTTATTTGATGTTCTATTTCGTTCCCAGGCTGGCCA TTGCTGACCCCTTTGAAGATACAAATGCAGAAGTGTGAAAAGTGCAGTAGGGAGTTTTGCTCTC CTGTGAACTTTAGAAGACATAACCGCATGCATCGCCGTCAAAGAAAGCCGGAAAAGGTTTGCTT AGTCTGAGCTTAACTATACTTTCTTCCTTTTATGTCTTTACTGGTTGCTTTACTCTTTTCTTTG AAGTCATCTGAAGTTTGTGTTTAAATGTTACCAGGATTTTGGCAAAGAGAGGGATGCGCTGGGA GCCTTTTGGAATAAGGTAGTTTTCCCTCTAGTAGTCTTCTCACAGTTATTGCCAATTCGATTAG TTTTTCCATCAGGTACTGATCTCTGTTGTTATTTCAGCTCTCTGCAACTGATGCAAAGGAGATT CTCTCAGTAAAGAGCATGATGCTTGAGGTACTATGATTCCCATTGATGCTTTCCCTTTTACCTT TATCTTAACTTAAAACGCATGGTGATCCTCACATACGAGTGTGGCATAACATGTTCTTCAGGCC CAATTCTAATTTCATTGTTGTTTGTCACATCTTGTCTAAGGGTTTGACTTTTTATGAATGCTTT ATCGCTCTTTTTTCTTCATTAGTGAAAGGTGTGATACATAATAAGCATTGTCATAAATGTTTCC TAGAATGCCATATGACTTCATCAGGGTTATGGGATTCGTTTCCAAATAAATACTTTTTCATTAA ACAAAAGTAAGAGTATACCATACCAGATTCGTATACATACACTCACAGGCTTGTTGAGTATGCA TATCTGATCCATGATGTACCTTTCTTACCTTCTTTTCTCTCGCATTATGCATCATGGACCTGTG TCCTGATTAAAATGATTTGTAGACTAACTCGAGATGCTTTGTTTGGATTCTTGTAGGATATTCC TGGGGCATCAGTGGAGTCAGGATTAATGTCACTTATCGAAAAACCAGGCTATACTGCTCTGCCA CAATATTATCTAAGAGCTGGTTCTGGCCTTTTGGTATGAATTGCATCTCTCTCTTGACGGTTTC TTTTTCCCTGTCTAGATAAACTATCCTCAATGTTCAACCTCATGGCTGATATATGTTCCTCTTT CTCCAGGATCTTCTCCAGGCTAGACCACCTAGACTTCCAATTTCTTCGCAGGAACTTTTTAGCA TTCTTGATGATGCAAGTGAAAAAACTTTCCTGTCTAGCGAGGCTGCACCAATGCAAAAGTACAT TTTTGACGGGGAAATAGGAAAAACTGTACTGGAGGCAAAAAATGTTGTTGCTTGCGCAAGCTTC CTTCTGGAACAGCGATTGGTAAATTTTTCCTTCAAAGTTTCACCATTCCTCTCTAGTTGGTAAA GCGAAGTGTCTAATACGAGAACTTTACTTTTCATGTATCCATTACACGCGATTTATCTTTATAT TCTTAATGTGAAGATTAAAGCATGGCTTGCTGACAAAGATGCTGAAGCTCTGAGGTGCCAAAAT TTACTGGTTGAAGAGGAAGAAGCTGCTCGAAGAAGGTAAGTGCTTATTAATTGCAATGCCAGTA ATATAACGTTGCTGAATCCACTAAGTGTTGAGTCTAATTCACTGGTATTATGTTCGGAGCAGAA AAGCTGAGCTCTTGGAGAGGAAGAAGAGGAAGAAGCTAAGGCAGAAAGAGCAGAGAGAGAAGGA CCAGAAAAAAGATGCTAAGGAAGACGAGAGCACCACATCAGAGGAACAACAATATCCAGCTGAG CCATCAAGCCCTTTATCTGTAGCTTCTGATTCTGAGGCACAGACACCAGATTCCTTACCAATTG ATGATTCTTCATCCCTCGAGGAACCTCAAGTTTTGGAAACTAATAATGGAAGAAACAGTGAAAC GCAAGTGCCAATGGTTGATGGCTTAGACAATGGCCAAAACATGGAAAGGCGAAGTGGCCGTAGG CAAATGCAAAGATCACAACAGGGAATGCCGAATGGGTTCCATGCTGATCATGCACCAAACCTTG GAGGCATGCGAAAGAATGGAACCAACAGAGACGCAAGAGCCAATACTACTAAAGTTTGGAGCCG AAAATCCGATAACCCCAAATTGATATCACAACATGCAGCAGTGACTCAGCAGGATCAGACAAAG AGCAGCGAATTTATAGTTGGATCGTTGAGTGTATCAATCCGAAACAGTGGCGAACATAACCAAA CCAAATGCAGTGAAGGGGAGAGAAGAACAAAGACTGTTGAGGTGAAACCCGCATCTGAGCAATC AACTGTAAAAATATGGAGACCAGTGAGCAGTCAGGGAAGAAAAACCTCAACAGTCAATGGAAAC ACAGACAAAGAAGATAAGAGATCAAACCCAACTACACCCGAAGTGAAAAACGCTCATCACATAA GCTTGCAGTTTAACAACCACGAAGCAAAGGCGTTTCTTGCAAAGAGTAAACCTTCTTTTACCCT TTCTTTTTATCTTAATCTCCCTATCGTTTATATTTTGGAAGTTGTTTACTCAATCTGAATAAAT GGCTTGTCAGGATGGAAAGAGGCAACCTCTGCAGAACACGTGACATTGGTTCTGTCTCAGGAAA CCGACATCTCAGGCAACAACACTCACGAGTCCTCAAATGGTGTTATAACCGCAAGATCAAAGCT GAGGACGAAAGCCGAAAAGGGCACAAAG

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.197210487

Conservation Information
Conserved circRNAs	NA
PMCS	0.197210487

			
				
						 Functional Information
					

				
						Coding potential
						Y
					

						Potential coding position
						
							13063801-13066824(+)
						
					

						Potential amino acid sequence
						
							MELVKQDGNDSLDMLIRRAVGKDPFLSFPRPENTPVQLFQLLHTLERPGWPLLTPLKIQMQKCE
KCSREFCSPVNFRRHNRMHRRQRKPEKDFGKERDALGAFWNKLSATDAKEILSVKSMMLEDIPG
ASVESGLMSLIEKPGYTALPQYYLRAGSGLLDLLQARPPRLPISSQELFSILDDASEKTFLSSE
AAPMQKYIFDGEIGKTVLEAKNVVACASFLLEQRLIKAWLADKDAEALRCQNLLVEEEEAARRR
KAELLERKKRKKLRQKEQREKDQKKDAKEDESTTSEEQQYPAEPSSPLSVASDSEAQTPDSLPI
DDSSSLEEPQVLETNNGRNSETQVPMVDGLDNGQNMERRSGRRQMQRSQQGMPNGFHADHAPNL
GGMRKNGTNRDARANTTKVWSRKSDNPKLISQHAAVTQQDQTKSSEFIVGSLSVSIRNSGEHNQ
TKCSEGERRTKTVEVKPASEQSTVKIWRPVSSQGRKTSTVNGNTDKEDKRSNPTTPEVKNAHHI
SLQFNNHEAKAFLAKSNLCRTRDIGSVSGNRHLRQQHSRGTKSNSMELVKQDGNDSLDMLIRRA
VGKDPFLSFPRPENTPVQLFQLLHTLERPGWPLLTPLKIQMQKCEKCSREFCSPVNFRRHNRMH
RRQRKPEKDFGKERDALGAFWNKLSATDAKEILSVKSMMLEDIPGASVESGLMSLIEKPGYTAL
PQYYLRAGSGLLDLLQARPPRLPISSQELFSILDDASEKTFLSSEAAPMQKYIFDGEIGKTVLE
AKNVVACASFLLEQRLIKAWLADKDAEALRCQNLLVEEEEAARRRKAELLERKKRKKLRQKEQR
EKDQKKDAKEDESTTSEEQQYPAEPSSPLSVASDSEAQTPDSLPIDDSSSLEEPQVLETNNGRN
SETQVPMVDGLDNGQNMERRSGRRQMQRSQQGMPNGFHADHAPNLGGMRKNGTNRDARANTTKV
WSRKSDNPKLISQHAAVTQQDQTKSSEFIVGSLSVSIRNSGEHNQTKCSEGERRTKTVEVKPAS
EQSTVKIWRPVSSQGRKTSTVNGNTDKEDKRSNPTTPEVKNAHHISLQFNNHEAKAFLAKSNLC
RTRDIGSVSGNRHLRQQHSRGTKSNSMELVKQDGNDSLDMLIRRAVGKDPFLSFPRPENTPVQL
FQLLHTLERPGWPLLTPLKIQMQKCEKCSREFCSPVNFRRHNRMHRRQRKPEKDFGKERDALGA
FWNKLSATDAKEILSVKSMMLEDIPGASVESGLMSLIEKPGYTALPQYYLRAGSGLLDLLQARP
PRLPISSQELFSILDDASEKTFLSSEAAPMQKYIFDGEIGKTVLEAKNVVACASFLLEQRLIKA
WLADKDAEALRCQNLLVEEEEAARRRKAELLERKKRKKLRQKEQREKDQKKDAKEDESTTSEEQ
QYPAEPSSPLSVASDSEAQTPDSLPIDDSSSLEEPQVLETNNGRNSETQVPMVDGLDNGQNMER
RSGRRQMQRSQQGMPNGFHADHAPNLGGMRKNGTNRDARANTTKVWSRKSDNPKLISQHAAVTQ
QDQTKSSEFIVGSLSVSIRNSGEHNQTKCSEGERRTKTVEVKPASEQSTVKIWRPVSSQGRKTS
TVNGNTDKEDKRSNPTTPEVKNAHHISLQFNNHEAKAFLAKSNLCRTRDIGSVSGNRHLRQQHS
RGTKSNSMELVKQDGNDSLDMLIRRAVGKDPFLSFPRPENTPVQLFQLLHTLERPGWPLLTPLK
IQMQKCEKCSREFCSPVNFRRHNRMHRRQRKPEKDFGKERDALGAFWNKLSATDAKEILSVKSM
MLEDIPGASVESGLMSLIEKPGYTALPQYYLRAGSGLLDLLQARPPRLPISSQELFSILDDASE
KTFLSSEAAPMQKYIFDGEIGKTVLEAKNVVACASFLLEQRLIKAWLADKDAEALRCQNLLVEE
EEAARRRKAELLERKKRKKLRQKEQREKDQKKDAKEDESTTSEEQQYPAEPSSPLSVASDSEAQ
TPDSLPIDDSSSLEEPQVLETNNGRNSETQVPMVDGLDNGQNMERRSGRRQMQRSQQGMPNGFH
ADHAPNLGGMRKNGTNRDARANTTKVWSRKSDNPKLISQHAAVTQQDQTKSSEFIVGSLSVSIR
NSGEHNQTKCSEGERRTKTVEVKPASEQSTVKIWRPVSSQGRKTSTVNGNTDKEDKRSNPTTPE
VKNAHHISLQFNNHEAKAFLAKSNLCRTRDIGSVSGNRHLRQQHSRGTK(+)
						
					

						Sponge-miRNAs
						
							NA						
					

						circRNA-miRNA-mRNA network
						 VISUALIZATION
					

						Potential function description
						NA
					

			
		

Functional Information
Coding potential	Y
Potential coding position	13063801-13066824(+)
Potential amino acid sequence	MELVKQDGNDSLDMLIRRAVGKDPFLSFPRPENTPVQLFQLLHTLERPGWPLLTPLKIQMQKCE KCSREFCSPVNFRRHNRMHRRQRKPEKDFGKERDALGAFWNKLSATDAKEILSVKSMMLEDIPG ASVESGLMSLIEKPGYTALPQYYLRAGSGLLDLLQARPPRLPISSQELFSILDDASEKTFLSSE AAPMQKYIFDGEIGKTVLEAKNVVACASFLLEQRLIKAWLADKDAEALRCQNLLVEEEEAARRR KAELLERKKRKKLRQKEQREKDQKKDAKEDESTTSEEQQYPAEPSSPLSVASDSEAQTPDSLPI DDSSSLEEPQVLETNNGRNSETQVPMVDGLDNGQNMERRSGRRQMQRSQQGMPNGFHADHAPNL GGMRKNGTNRDARANTTKVWSRKSDNPKLISQHAAVTQQDQTKSSEFIVGSLSVSIRNSGEHNQ TKCSEGERRTKTVEVKPASEQSTVKIWRPVSSQGRKTSTVNGNTDKEDKRSNPTTPEVKNAHHI SLQFNNHEAKAFLAKSNLCRTRDIGSVSGNRHLRQQHSRGTKSNSMELVKQDGNDSLDMLIRRA VGKDPFLSFPRPENTPVQLFQLLHTLERPGWPLLTPLKIQMQKCEKCSREFCSPVNFRRHNRMH RRQRKPEKDFGKERDALGAFWNKLSATDAKEILSVKSMMLEDIPGASVESGLMSLIEKPGYTAL PQYYLRAGSGLLDLLQARPPRLPISSQELFSILDDASEKTFLSSEAAPMQKYIFDGEIGKTVLE AKNVVACASFLLEQRLIKAWLADKDAEALRCQNLLVEEEEAARRRKAELLERKKRKKLRQKEQR EKDQKKDAKEDESTTSEEQQYPAEPSSPLSVASDSEAQTPDSLPIDDSSSLEEPQVLETNNGRN SETQVPMVDGLDNGQNMERRSGRRQMQRSQQGMPNGFHADHAPNLGGMRKNGTNRDARANTTKV WSRKSDNPKLISQHAAVTQQDQTKSSEFIVGSLSVSIRNSGEHNQTKCSEGERRTKTVEVKPAS EQSTVKIWRPVSSQGRKTSTVNGNTDKEDKRSNPTTPEVKNAHHISLQFNNHEAKAFLAKSNLC RTRDIGSVSGNRHLRQQHSRGTKSNSMELVKQDGNDSLDMLIRRAVGKDPFLSFPRPENTPVQL FQLLHTLERPGWPLLTPLKIQMQKCEKCSREFCSPVNFRRHNRMHRRQRKPEKDFGKERDALGA FWNKLSATDAKEILSVKSMMLEDIPGASVESGLMSLIEKPGYTALPQYYLRAGSGLLDLLQARP PRLPISSQELFSILDDASEKTFLSSEAAPMQKYIFDGEIGKTVLEAKNVVACASFLLEQRLIKA WLADKDAEALRCQNLLVEEEEAARRRKAELLERKKRKKLRQKEQREKDQKKDAKEDESTTSEEQ QYPAEPSSPLSVASDSEAQTPDSLPIDDSSSLEEPQVLETNNGRNSETQVPMVDGLDNGQNMER RSGRRQMQRSQQGMPNGFHADHAPNLGGMRKNGTNRDARANTTKVWSRKSDNPKLISQHAAVTQ QDQTKSSEFIVGSLSVSIRNSGEHNQTKCSEGERRTKTVEVKPASEQSTVKIWRPVSSQGRKTS TVNGNTDKEDKRSNPTTPEVKNAHHISLQFNNHEAKAFLAKSNLCRTRDIGSVSGNRHLRQQHS RGTKSNSMELVKQDGNDSLDMLIRRAVGKDPFLSFPRPENTPVQLFQLLHTLERPGWPLLTPLK IQMQKCEKCSREFCSPVNFRRHNRMHRRQRKPEKDFGKERDALGAFWNKLSATDAKEILSVKSM MLEDIPGASVESGLMSLIEKPGYTALPQYYLRAGSGLLDLLQARPPRLPISSQELFSILDDASE KTFLSSEAAPMQKYIFDGEIGKTVLEAKNVVACASFLLEQRLIKAWLADKDAEALRCQNLLVEE EEAARRRKAELLERKKRKKLRQKEQREKDQKKDAKEDESTTSEEQQYPAEPSSPLSVASDSEAQ TPDSLPIDDSSSLEEPQVLETNNGRNSETQVPMVDGLDNGQNMERRSGRRQMQRSQQGMPNGFH ADHAPNLGGMRKNGTNRDARANTTKVWSRKSDNPKLISQHAAVTQQDQTKSSEFIVGSLSVSIR NSGEHNQTKCSEGERRTKTVEVKPASEQSTVKIWRPVSSQGRKTSTVNGNTDKEDKRSNPTTPE VKNAHHISLQFNNHEAKAFLAKSNLCRTRDIGSVSGNRHLRQQHSRGTK(+)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Chu et al., 2017

circRNA

Detail information of AT4G25610_circ_g.4

Address

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