Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d038189_circ_g.1 |
ID in PlantcircBase | zma_circ_009119 |
Alias | zma_circ_0002383, GRMZM2G167243_C1 |
Organism | Zea mays |
Position | chr6: 150913852-150915889 JBrowse» |
Reference genome | AGPv4.38 |
Type | u-circRNA |
Identification method | find_circ, CIRI2 |
Parent gene | Zm00001d038189 |
Parent gene annotation |
FAD/NAD(P)-binding oxidoreductase family protein |
Parent gene strand | - |
Alternative splicing | Zm00001d038189_circ_g.2 |
Support reads | NA |
Tissues | leaf, root |
Exon boundary | No-Yes |
Splicing signals | CT-AC |
Number of exons covered | Zm00001d038189_T012:6 Zm00001d038189_T004:6 Zm00001d038189_T005:6 Zm00001d038189_T002:6 Zm00001d038189_T008:5 Zm00001d038189_T007:6 Zm00001d038189_T006:6 Zm00001d038189_T011:5 Zm00001d038189_T010:6 Zm00001d038189_T003:6 Zm00001d038189_T001:5 Zm00001d038189_T009:5 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.154181088 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | zma-miR168b-3p |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | responsive to drought stress |
Other Information | |
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References | Ma et al., 2021b;Zhang et al., 2019 |