Detailed infomation of each circRNA
General Information | |
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CircRNA Name | AT1G05960_circ_g.5 |
ID in PlantcircBase | ath_circ_000916 |
Alias | At_ciR2033, AT1G05960_C3 |
Organism | Arabidpsis thaliana |
Position | chr1: 1809506-1809940 JBrowse» |
Reference genome | TAIR10.38 |
Type | e-circRNA |
Identification method | find_circ, CIRI2 |
Parent gene | AT1G05960 |
Parent gene annotation |
ARM repeat superfamily protein |
Parent gene strand | - |
Alternative splicing | AT1G05960_circ_g.3 AT1G05960_circ_g.4 AT1G05960_circ_g.6 |
Support reads | 4 |
Tissues | leaf |
Exon boundary | Yes-Yes |
Splicing signals | CT-AC |
Number of exons covered | AT1G05960.4:2 AT1G05960.3:2 AT1G05960.2:2 AT1G05960.1:2 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.28006272 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | response to drought stress |
Other Information | |
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References | Ye et al., 2015;Zhang et al., 2019 |