Plant Circular RNA Database

Detail information of Os06g0645800_circ_g.1

			
						 General Information
					
						CircRNA Name
						Os06g0645800_circ_g.1
					
						ID in PlantcircBase
						osa_circ_031741
					
						Alias
						NA
					
						Organism
						
							Oryza sativa						
					
						Position
						
							chr6: 26362787-26365923  JBrowse»						
					
						Reference genome
						
							IRGSP-1.0.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						CIRCexplorer
					
						Parent gene
						
							Os06g0645800						
					
						Parent gene annotation
						
							Similar to Transcription initiation factor TFIID subunit 1. (Os0
6t0645800-01)
							
						Parent gene strand
						-
					
						Alternative splicing
						
							Os06g0645800_circ_igg.2 Os06g0645800_circ_igg.3 Os06g0645901_circ_igg.1 EPlOSAG00000025654_circ_ig.1 EPlOSAG00000003981_circ_ig.1 EPlOSAG00000003981_circ_ig.2 EPlOSAG00000003981_circ_ig.3 EPlOSAG00000003981_circ_ig.4 						
					
						Support reads
						1
					
						Tissues
						root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Os06t0645800-01:6

General Information
CircRNA Name	Os06g0645800_circ_g.1
ID in PlantcircBase	osa_circ_031741
Alias	NA
Organism	Oryza sativa
Position	chr6: 26362787-26365923 JBrowse»
Reference genome	IRGSP-1.0.38
Type	e-circRNA
Identification method	CIRCexplorer
Parent gene	Os06g0645800
Parent gene annotation	Similar to Transcription initiation factor TFIID subunit 1. (Os0 6t0645800-01)
Parent gene strand	-
Alternative splicing	Os06g0645800_circ_igg.2 Os06g0645800_circ_igg.3 Os06g0645901_circ_igg.1 EPlOSAG00000025654_circ_ig.1 EPlOSAG00000003981_circ_ig.1 EPlOSAG00000003981_circ_ig.2 EPlOSAG00000003981_circ_ig.3 EPlOSAG00000003981_circ_ig.4
Support reads	1
Tissues	root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Os06t0645800-01:6

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							AACTCACATTTTCAGGTGTCAATAATCTTCTCAGTTCTTCCTCCGATGGAATCCGAAAATCAGG
TCTCTGAATATAGAACAAATGTCCCTTTGGTCCTTTcttgaacccatcctttcctgggatattt
ttcctttttactagaataatatcatcatttgcatcaaatcctgtctttgttcttagttttgagg
gtaaactt

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 1284
Transcript exons: 26362787-26362906,26363009-26363184,26363276-26363759,26
364193-26364396,26365323-26365529,26365831-26365923
CTTGAACCCATCCTTTCCTGGGATATTTTTCCTTTTTACTAGAATAATATCATCATTTGCATCA
AATCCTGTCTTTGTTCTTAGTTTTGAGGGTAAACTTCCTTCAGCAAAATTTTCAACCTCCTTGG
CTTCTCTTGGTATGCTCTCTTTTGGGGTTAATGCACCGGCATATACAGACGATTTAATCATTTG
GCCAGCCTTACCCTGCTTCATTTTATTGCCCTGATTATACATAGGAGTGCTATAATTTGTAGTT
TCCACAGGCTGCTTCTTCCTCTTCATATCACTATCACTCTCTTCAAGCAGTTTTTCTACTAGAG
CAGCCTCTGCTACATCATCTTGAATTTCCTCATTAATTTGGGATTGAGTATGACACCTTCTCAT
TTTAAGCCCTCTCATTCCATCCATTTTATCGCTTCTTATGTCTGTATTACCAACATCTTCATCA
TCAAATTCTTCTGCGTCTAGCAAATTTTCAAGATCCCCAGCAAATGAGTCAAGATCACTGTTAG
CTTCTGTGTCACTGCCATTTTCATTGCCGTCCATAGCTGAAAGTGACTGAATTTGTCTGTCCCA
AATTTCCTGACATTTCTCTTTAGTTTGCTGCTGAAGCTGCAGAAAAGACATCCTTTGTCCCCGT
GCAAACTTACTAACTGGAATTTCATCCATTGTAACACCCGATGCAGCTTGTTCACTTGAAAGCT
TCCTCACCATCGCGATCCGATGCCACCTTGTTAACTTGTCAATTTGCTCTTCTGGAACGCCAAA
TTTGAGTAGCAACTCTCGAGCTGCATCCATGCTCAACCTGCGGAGATCAGCATCTGTTCCAGTC
ACAGTGGTGCCTTTTGCAGCAGCTGACTTCTTCTTATGTGTTGAATTGGATACAGGTGCTTTTG
GAGTTACTCGTACATAGCTAAATCCTAGCCCACGGCCAGATGGATCACCAACACCAGTAATTTC
TAATCTCTCTATATTTTCCTTGTCCTGGTTTGTACAAGCAACAAAATTGCTGGTAAGATTCCAG
CTAGTGATTTGCAATTCCCTCTCAATATGAGCTGCAGCAGCAAGCTCAATAGCTTCATCAGGAA
GCTGATTCATGGCAGATGCAAGTCCCACAGGCTGAGTAAGCTTCTCAATTCCTAAGTGCTTGAG
ACGATACTGGCCAGCTTGCATACTCTCATAACAGCAGACATTTTCAGGTGTCAATAATCTTCTC
AGTTCTTCCTCCGATGGAATCCGAAAATCAGGTCTCTGAATATAGAACAAATGTCCCTTTGGTC
CTTT
						
					

						Genomic sequence
						
							CTTGAACCCATCCTTTCCTGGGATATTTTTCCTTTTTACTAGAATAATATCATCATTTGCATCA
AATCCTGTCTTTGTTCTTAGTTTTGAGGGTAAACTTCCTTCAGCAAAATTTTCAACCTGCACGC
AATGGCATGGCTCACTCTGTTATTTTAGAGATTGTTTCTTCTAGTACGGAAAAACAATGAGTAG
GTTTAGAGTTTAGGACAGAATTTCTTGTACCTCCTTGGCTTCTCTTGGTATGCTCTCTTTTGGG
GTTAATGCACCGGCATATACAGACGATTTAATCATTTGGCCAGCCTTACCCTGCTTCATTTTAT
TGCCCTGATTATACATAGGAGTGCTATAATTTGTAGTTTCCACAGGCTGCTTCTTCCTCTTCAT
ATCACTATCACTCTCTGCAACACAGTAGGCAATCAATTATAAATACTAGTTACCAAATTTGGTA
TCTGAAAAGCAACATATATGACTAAATTGGTAGTTAATCACCTTCAAGCAGTTTTTCTACTAGA
GCAGCCTCTGCTACATCATCTTGAATTTCCTCATTAATTTGGGATTGAGTATGACACCTTCTCA
TTTTAAGCCCTCTCATTCCATCCATTTTATCGCTTCTTATGTCTGTATTACCAACATCTTCATC
ATCAAATTCTTCTGCGTCTAGCAAATTTTCAAGATCCCCAGCAAATGAGTCAAGATCACTGTTA
GCTTCTGTGTCACTGCCATTTTCATTGCCGTCCATAGCTGAAAGTGACTGAATTTGTCTGTCCC
AAATTTCCTGACATTTCTCTTTAGTTTGCTGCTGAAGCTGCAGAAAAGACATCCTTTGTCCCCG
TGCAAACTTACTAACTGGAATTTCATCCATTGTAACACCCGATGCAGCTTGTTCACTTGAAAGC
TTCCTCACCATCGCGATCCGATGCCACCTTGTTAACTTGTCAATTTGCTCTTCTGGAACGCCAA
ATTTGAGTAGCAACTATTTACAACAATATCAGTGTCAAATCTCAGTGAATAAAGTGTAAAAGAA
CATAAAAACAGCATGGCTGAAATGCAAGCATGGGGTATATTCTTCCATGCCAACAAAAAAAAAA
TACAGGTATCTAAATTATGACCGAGTGTGTCAATGGCATGTGCAGACTCGCAGTAGGTCCCACT
TGTAATTCTCGCGGCAGTTGGTATTTTGACAAAATGTGTTTGTTTTACATGGTATGAAGGCAAT
TAATATTTTGTTATTACAGGGATCCATGTGATTCTTCATCATACCCCAGTTAATAAAATAAACA
TCTGAGATAATTATATGTTCACACTAAAGCATGTTCCATGATGATACTAAGGCATCTCAGTGCC
TGGAACCCCAGGAAATGTATTTTTGTGCATCATACTGCTAAGATTGTGAGGGCTGATGGTACCT
CTCGAGCTGCATCCATGCTCAACCTGCGGAGATCAGCATCTGTTCCAGTCACAGTGGTGCCTTT
TGCAGCAGCTGACTTCTTCTTATGTGTTGAATTGGATACAGGTGCTTTTGGAGTTACTCGTACA
TAGCTAAATCCTAGCCCACGGCCAGATGGATCACCAACACCAGTAATTTCTAATCTCTCTATAT
TTTCCTTGTCCTGCATACACCCGATGGCATTAGATTTGAGCAAGTCAAGGAAAAACATAATCAA
CACACAAGGAACCATATGCCTGTGCATTTAAGTTCTATATACAAAAGAGATGATACAAATGCAC
GTGTTCAACATACATTACCCACCTAGCCAGAGTTGCAACTGGGTATCCTCTATCAAAACAATAG
GCTATCCAATAACATGGGCACAGGCAATAAATTTAAATTTGGCCAGGAAGGGTATCACCTGATT
TATCTGTTTTCTCAACCCTCTCCTCCCACTTTCCCTACTGGACCTATCTCCCATCATCCCCTTC
CTCCCTCTCTGTTCTTTGTGCTCCTTACTCCAAGGGTCTCTCTACTCCCTCGGTGAATCTAAAT
CTTTGTACCCTCCCTTGATTTCTCTCCGCTCACTCATTTTTTTCCCACCTAGTCTAGCTCATAC
TAGTTGGGTAACCATGTCCACTGGACATGAACAATTTTCATATGTAAGAATAATGAATGTTTGA
ATTATGGTTTGTGTGGATTTCCATGCAGTATGTGTTACACCCAACAGTGGCAGTCCAATTCTCA
GCACCCAAATGCAACTCAAATAGAGCGATGTACATCAAATTTAGAAACCAGTCAAACCACTTTA
TCAATCTTACACAGTCAAAATCAGAGAATGTGAAATACACATACAAATTTAATTAATTTCCACA
AAGATAGAATATATATCCCACAGGTACTACAAGATGGTACCCTGAGTCCCTTTCTCTACAATGT
TAATTCAGTAAAGAGTGATGATGAAGGTTATCCTAAGTCTGTCTAGAATACATCAATTTTTACT
CTTTAGTTCACATCGACAATAGCTGGTTTTAGGTATATAAATTGTCACAGAGAAAACAAGACAT
GATGGATCAATGTGATCATTGAAAGAATATAGGTCAGTACCTGGTTTGTACAAGCAACAAAATT
GCTGGTAAGATTCCAGCTAGTGATTTGCAATTCCCTCTCAATATGAGCTGCAGCAGCAAGCTCA
ATAGCTTCATCAGGAAGCTGATTCATGGCAGATGCAAGTCCCACAGGCTGAGTAAGCTTCTCAA
TTCCTAAGTGCTTGAGACGATACTGGCCAGCTTGCATACTCTCATAACAGCAGACCTGATGAAG
GGTTCAAGACAAAATAAACTCGGTAGGAAGCCATGGCAGTAGTCTAAGATTGCAACATTATGAC
TATTAAACAATTATTAAACTAAAAATGAACAAAATTTAATAACCTACATGCACAAACAATTTGC
TCAGTGGTATAGCATGATATTAAAATTTGAAGCAAGTATTTCACATGCTGGCAACTGTCATACG
GCCAATGCAATGTGATGACTGATTAATGCATCAAAAGTCACAAATGTAACATACAAGGCATTAT
CGATACAAGTGATGGAAGTAATTTTGGGAAACTCACATTTTCAGGTGTCAATAATCTTCTCAGT
TCTTCCTCCGATGGAATCCGAAAATCAGGTCTCTGAATATAGAACAAATGTCCCTTTGGTCCTT
T
						
					

			
		

Sequences
Splice junction sequence	AACTCACATTTTCAGGTGTCAATAATCTTCTCAGTTCTTCCTCCGATGGAATCCGAAAATCAGG TCTCTGAATATAGAACAAATGTCCCTTTGGTCCTTTcttgaacccatcctttcctgggatattt ttcctttttactagaataatatcatcatttgcatcaaatcctgtctttgttcttagttttgagg gtaaactt
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 1284 Transcript exons: 26362787-26362906,26363009-26363184,26363276-26363759,26 364193-26364396,26365323-26365529,26365831-26365923 CTTGAACCCATCCTTTCCTGGGATATTTTTCCTTTTTACTAGAATAATATCATCATTTGCATCA AATCCTGTCTTTGTTCTTAGTTTTGAGGGTAAACTTCCTTCAGCAAAATTTTCAACCTCCTTGG CTTCTCTTGGTATGCTCTCTTTTGGGGTTAATGCACCGGCATATACAGACGATTTAATCATTTG GCCAGCCTTACCCTGCTTCATTTTATTGCCCTGATTATACATAGGAGTGCTATAATTTGTAGTT TCCACAGGCTGCTTCTTCCTCTTCATATCACTATCACTCTCTTCAAGCAGTTTTTCTACTAGAG CAGCCTCTGCTACATCATCTTGAATTTCCTCATTAATTTGGGATTGAGTATGACACCTTCTCAT TTTAAGCCCTCTCATTCCATCCATTTTATCGCTTCTTATGTCTGTATTACCAACATCTTCATCA TCAAATTCTTCTGCGTCTAGCAAATTTTCAAGATCCCCAGCAAATGAGTCAAGATCACTGTTAG CTTCTGTGTCACTGCCATTTTCATTGCCGTCCATAGCTGAAAGTGACTGAATTTGTCTGTCCCA AATTTCCTGACATTTCTCTTTAGTTTGCTGCTGAAGCTGCAGAAAAGACATCCTTTGTCCCCGT GCAAACTTACTAACTGGAATTTCATCCATTGTAACACCCGATGCAGCTTGTTCACTTGAAAGCT TCCTCACCATCGCGATCCGATGCCACCTTGTTAACTTGTCAATTTGCTCTTCTGGAACGCCAAA TTTGAGTAGCAACTCTCGAGCTGCATCCATGCTCAACCTGCGGAGATCAGCATCTGTTCCAGTC ACAGTGGTGCCTTTTGCAGCAGCTGACTTCTTCTTATGTGTTGAATTGGATACAGGTGCTTTTG GAGTTACTCGTACATAGCTAAATCCTAGCCCACGGCCAGATGGATCACCAACACCAGTAATTTC TAATCTCTCTATATTTTCCTTGTCCTGGTTTGTACAAGCAACAAAATTGCTGGTAAGATTCCAG CTAGTGATTTGCAATTCCCTCTCAATATGAGCTGCAGCAGCAAGCTCAATAGCTTCATCAGGAA GCTGATTCATGGCAGATGCAAGTCCCACAGGCTGAGTAAGCTTCTCAATTCCTAAGTGCTTGAG ACGATACTGGCCAGCTTGCATACTCTCATAACAGCAGACATTTTCAGGTGTCAATAATCTTCTC AGTTCTTCCTCCGATGGAATCCGAAAATCAGGTCTCTGAATATAGAACAAATGTCCCTTTGGTC CTTT
Genomic sequence	CTTGAACCCATCCTTTCCTGGGATATTTTTCCTTTTTACTAGAATAATATCATCATTTGCATCA AATCCTGTCTTTGTTCTTAGTTTTGAGGGTAAACTTCCTTCAGCAAAATTTTCAACCTGCACGC AATGGCATGGCTCACTCTGTTATTTTAGAGATTGTTTCTTCTAGTACGGAAAAACAATGAGTAG GTTTAGAGTTTAGGACAGAATTTCTTGTACCTCCTTGGCTTCTCTTGGTATGCTCTCTTTTGGG GTTAATGCACCGGCATATACAGACGATTTAATCATTTGGCCAGCCTTACCCTGCTTCATTTTAT TGCCCTGATTATACATAGGAGTGCTATAATTTGTAGTTTCCACAGGCTGCTTCTTCCTCTTCAT ATCACTATCACTCTCTGCAACACAGTAGGCAATCAATTATAAATACTAGTTACCAAATTTGGTA TCTGAAAAGCAACATATATGACTAAATTGGTAGTTAATCACCTTCAAGCAGTTTTTCTACTAGA GCAGCCTCTGCTACATCATCTTGAATTTCCTCATTAATTTGGGATTGAGTATGACACCTTCTCA TTTTAAGCCCTCTCATTCCATCCATTTTATCGCTTCTTATGTCTGTATTACCAACATCTTCATC ATCAAATTCTTCTGCGTCTAGCAAATTTTCAAGATCCCCAGCAAATGAGTCAAGATCACTGTTA GCTTCTGTGTCACTGCCATTTTCATTGCCGTCCATAGCTGAAAGTGACTGAATTTGTCTGTCCC AAATTTCCTGACATTTCTCTTTAGTTTGCTGCTGAAGCTGCAGAAAAGACATCCTTTGTCCCCG TGCAAACTTACTAACTGGAATTTCATCCATTGTAACACCCGATGCAGCTTGTTCACTTGAAAGC TTCCTCACCATCGCGATCCGATGCCACCTTGTTAACTTGTCAATTTGCTCTTCTGGAACGCCAA ATTTGAGTAGCAACTATTTACAACAATATCAGTGTCAAATCTCAGTGAATAAAGTGTAAAAGAA CATAAAAACAGCATGGCTGAAATGCAAGCATGGGGTATATTCTTCCATGCCAACAAAAAAAAAA TACAGGTATCTAAATTATGACCGAGTGTGTCAATGGCATGTGCAGACTCGCAGTAGGTCCCACT TGTAATTCTCGCGGCAGTTGGTATTTTGACAAAATGTGTTTGTTTTACATGGTATGAAGGCAAT TAATATTTTGTTATTACAGGGATCCATGTGATTCTTCATCATACCCCAGTTAATAAAATAAACA TCTGAGATAATTATATGTTCACACTAAAGCATGTTCCATGATGATACTAAGGCATCTCAGTGCC TGGAACCCCAGGAAATGTATTTTTGTGCATCATACTGCTAAGATTGTGAGGGCTGATGGTACCT CTCGAGCTGCATCCATGCTCAACCTGCGGAGATCAGCATCTGTTCCAGTCACAGTGGTGCCTTT TGCAGCAGCTGACTTCTTCTTATGTGTTGAATTGGATACAGGTGCTTTTGGAGTTACTCGTACA TAGCTAAATCCTAGCCCACGGCCAGATGGATCACCAACACCAGTAATTTCTAATCTCTCTATAT TTTCCTTGTCCTGCATACACCCGATGGCATTAGATTTGAGCAAGTCAAGGAAAAACATAATCAA CACACAAGGAACCATATGCCTGTGCATTTAAGTTCTATATACAAAAGAGATGATACAAATGCAC GTGTTCAACATACATTACCCACCTAGCCAGAGTTGCAACTGGGTATCCTCTATCAAAACAATAG GCTATCCAATAACATGGGCACAGGCAATAAATTTAAATTTGGCCAGGAAGGGTATCACCTGATT TATCTGTTTTCTCAACCCTCTCCTCCCACTTTCCCTACTGGACCTATCTCCCATCATCCCCTTC CTCCCTCTCTGTTCTTTGTGCTCCTTACTCCAAGGGTCTCTCTACTCCCTCGGTGAATCTAAAT CTTTGTACCCTCCCTTGATTTCTCTCCGCTCACTCATTTTTTTCCCACCTAGTCTAGCTCATAC TAGTTGGGTAACCATGTCCACTGGACATGAACAATTTTCATATGTAAGAATAATGAATGTTTGA ATTATGGTTTGTGTGGATTTCCATGCAGTATGTGTTACACCCAACAGTGGCAGTCCAATTCTCA GCACCCAAATGCAACTCAAATAGAGCGATGTACATCAAATTTAGAAACCAGTCAAACCACTTTA TCAATCTTACACAGTCAAAATCAGAGAATGTGAAATACACATACAAATTTAATTAATTTCCACA AAGATAGAATATATATCCCACAGGTACTACAAGATGGTACCCTGAGTCCCTTTCTCTACAATGT TAATTCAGTAAAGAGTGATGATGAAGGTTATCCTAAGTCTGTCTAGAATACATCAATTTTTACT CTTTAGTTCACATCGACAATAGCTGGTTTTAGGTATATAAATTGTCACAGAGAAAACAAGACAT GATGGATCAATGTGATCATTGAAAGAATATAGGTCAGTACCTGGTTTGTACAAGCAACAAAATT GCTGGTAAGATTCCAGCTAGTGATTTGCAATTCCCTCTCAATATGAGCTGCAGCAGCAAGCTCA ATAGCTTCATCAGGAAGCTGATTCATGGCAGATGCAAGTCCCACAGGCTGAGTAAGCTTCTCAA TTCCTAAGTGCTTGAGACGATACTGGCCAGCTTGCATACTCTCATAACAGCAGACCTGATGAAG GGTTCAAGACAAAATAAACTCGGTAGGAAGCCATGGCAGTAGTCTAAGATTGCAACATTATGAC TATTAAACAATTATTAAACTAAAAATGAACAAAATTTAATAACCTACATGCACAAACAATTTGC TCAGTGGTATAGCATGATATTAAAATTTGAAGCAAGTATTTCACATGCTGGCAACTGTCATACG GCCAATGCAATGTGATGACTGATTAATGCATCAAAAGTCACAAATGTAACATACAAGGCATTAT CGATACAAGTGATGGAAGTAATTTTGGGAAACTCACATTTTCAGGTGTCAATAATCTTCTCAGT TCTTCCTCCGATGGAATCCGAAAATCAGGTCTCTGAATATAGAACAAATGTCCCTTTGGTCCTT T

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.352360478

Conservation Information
Conserved circRNAs	NA
PMCS	0.352360478

			
				
						 Functional Information
					

				
						Coding potential
						Y
					

						Potential coding position
						
							26365513-26362789(-)
26362799-26365856(-)
						
					

						Potential amino acid sequence
						
							MQAGQYRLKHLGIEKLTQPVGLASAMNQLPDEAIELAAAAHIERELQITSWNLTSNFVACTNQD
KENIERLEITGVGDPSGRGLGFSYVRVTPKAPVSNSTHKKKSAAAKGTTVTGTDADLRRLSMDA
ARELLLKFGVPEEQIDKLTRWHRIAMVRKLSSEQAASGVTMDEIPVSKFARGQRMSFLQLQQQT
KEKCQEIWDRQIQSLSAMDGNENGSDTEANSDLDSFAGDLENLLDAEEFDDEDVGNTDIRSDKM
DGMRGLKMRRCHTQSQINEEIQDDVAEAALVEKLLEESDSDMKRKKQPVETTNYSTPMYNQGNK
MKQGKAGQMIKSSVYAGALTPKESIPREAKEVENFAEGSLPSKLRTKTGFDANDDIILVKRKNI
PGKDGFKKGPKGHLFYIQRPDFRIPSEEELRRLLTPENVCCYESMQAGQYRLKHLGIEKLTQPV
GLASAMNQLPDEAIELAAAAHIERELQITSWNLTSNFVACTNQDKENIERLEITGVGDPSGRGL
GFSYVRVTPKAPVSNSTHKKKSAAAKGTTVTGTDADLRRLSMDAARELLLKFGVPEEQIDKLTR
WHRIAMVRKLSSEQAASGVTMDEIPVSKFARGQRMSFLQLQQQTKEKCQEIWDRQIQSLSAMDG
NENGSDTEANSDLDSFAGDLENLLDAEEFDDEDVGNTDIRSDKMDGMRGLKMRRCHTQSQINEE
IQDDVAEAALVEKLLEESDSDMKRKKQPVETTNYSTPMYNQGNKMKQGKAGQMIKSSVYAGALT
PKESIPREAKEVENFAEGSLPSKLRTKTGFDANDDIILVKRKNIPGKDGFKKGPKGHLFYIQRP
DFRIPSEEELRRLLTPENVCCYESMQAGQYRLKHLGIEKLTQPVGLASAMNQLPDEAIELAAAA
HIERELQITSWNLTSNFVACTNQDKENIERLEITGVGDPSGRGLGFSYVRVTPKAPVSNSTHKK
KSAAAKGTTVTGTDADLRRLSMDAARELLLKFGVPEEQIDKLTRWHRIAMVRKLSSEQAASGVT
MDEIPVSKFARGQRMSFLQLQQQTKEKCQEIWDRQIQSLSAMDGNENGSDTEANSDLDSFAGDL
ENLLDAEEFDDEDVGNTDIRSDKMDGMRGLKMRRCHTQSQINEEIQDDVAEAALVEKLLEESDS
DMKRKKQPVETTNYSTPMYNQGNKMKQGKAGQMIKSSVYAGALTPKESIPREAKEVENFAEGSL
PSKLRTKTGFDANDDIILVKRKNIPGKDGFKKGPKGHLFYIQRPDFRIPSEEELRRLLTPENVC
CYESMQAGQYRLKHLGIEKLTQPVGLASAMNQLPDEAIELAAAAHIERELQITSWNLTSNFVAC
TNQDKENIERLEITGVGDPSGRGLGFSYVRVTPKAPVSNSTHKKKSAAAKGTTVTGTDADLRRL
SMDAARELLLKFGVPEEQIDKLTRWHRIAMVRKLSSEQAASGVTMDEIPVSKFARGQRMSFLQL
QQQTKEKCQEIWDRQIQSLSAMDGNENGSDTEANSDLDSFAGDLENLLDAEEFDDEDVGNTDIR
SDKMDGMRGLKMRRCHTQSQINEEIQDDVAEAALVEKLLEESDSDMKRKKQPVETTNYSTPMYN
QGNKMKQGKAGQMIKSSVYAGALTPKESIPREAKEVENFAEGSLPSKLRTKTGFDANDDIILVK
RKNIPGKDGFK(-)
MGSRKDQRDICSIFRDLIFGFHRRKN*(-)
						
					

						Sponge-miRNAs
						
							NA						
					

						circRNA-miRNA-mRNA network
						 VISUALIZATION
					

						Potential function description
						NA
					

			
		

Functional Information
Coding potential	Y
Potential coding position	26365513-26362789(-) 26362799-26365856(-)
Potential amino acid sequence	MQAGQYRLKHLGIEKLTQPVGLASAMNQLPDEAIELAAAAHIERELQITSWNLTSNFVACTNQD KENIERLEITGVGDPSGRGLGFSYVRVTPKAPVSNSTHKKKSAAAKGTTVTGTDADLRRLSMDA ARELLLKFGVPEEQIDKLTRWHRIAMVRKLSSEQAASGVTMDEIPVSKFARGQRMSFLQLQQQT KEKCQEIWDRQIQSLSAMDGNENGSDTEANSDLDSFAGDLENLLDAEEFDDEDVGNTDIRSDKM DGMRGLKMRRCHTQSQINEEIQDDVAEAALVEKLLEESDSDMKRKKQPVETTNYSTPMYNQGNK MKQGKAGQMIKSSVYAGALTPKESIPREAKEVENFAEGSLPSKLRTKTGFDANDDIILVKRKNI PGKDGFKKGPKGHLFYIQRPDFRIPSEEELRRLLTPENVCCYESMQAGQYRLKHLGIEKLTQPV GLASAMNQLPDEAIELAAAAHIERELQITSWNLTSNFVACTNQDKENIERLEITGVGDPSGRGL GFSYVRVTPKAPVSNSTHKKKSAAAKGTTVTGTDADLRRLSMDAARELLLKFGVPEEQIDKLTR WHRIAMVRKLSSEQAASGVTMDEIPVSKFARGQRMSFLQLQQQTKEKCQEIWDRQIQSLSAMDG NENGSDTEANSDLDSFAGDLENLLDAEEFDDEDVGNTDIRSDKMDGMRGLKMRRCHTQSQINEE IQDDVAEAALVEKLLEESDSDMKRKKQPVETTNYSTPMYNQGNKMKQGKAGQMIKSSVYAGALT PKESIPREAKEVENFAEGSLPSKLRTKTGFDANDDIILVKRKNIPGKDGFKKGPKGHLFYIQRP DFRIPSEEELRRLLTPENVCCYESMQAGQYRLKHLGIEKLTQPVGLASAMNQLPDEAIELAAAA HIERELQITSWNLTSNFVACTNQDKENIERLEITGVGDPSGRGLGFSYVRVTPKAPVSNSTHKK KSAAAKGTTVTGTDADLRRLSMDAARELLLKFGVPEEQIDKLTRWHRIAMVRKLSSEQAASGVT MDEIPVSKFARGQRMSFLQLQQQTKEKCQEIWDRQIQSLSAMDGNENGSDTEANSDLDSFAGDL ENLLDAEEFDDEDVGNTDIRSDKMDGMRGLKMRRCHTQSQINEEIQDDVAEAALVEKLLEESDS DMKRKKQPVETTNYSTPMYNQGNKMKQGKAGQMIKSSVYAGALTPKESIPREAKEVENFAEGSL PSKLRTKTGFDANDDIILVKRKNIPGKDGFKKGPKGHLFYIQRPDFRIPSEEELRRLLTPENVC CYESMQAGQYRLKHLGIEKLTQPVGLASAMNQLPDEAIELAAAAHIERELQITSWNLTSNFVAC TNQDKENIERLEITGVGDPSGRGLGFSYVRVTPKAPVSNSTHKKKSAAAKGTTVTGTDADLRRL SMDAARELLLKFGVPEEQIDKLTRWHRIAMVRKLSSEQAASGVTMDEIPVSKFARGQRMSFLQL QQQTKEKCQEIWDRQIQSLSAMDGNENGSDTEANSDLDSFAGDLENLLDAEEFDDEDVGNTDIR SDKMDGMRGLKMRRCHTQSQINEEIQDDVAEAALVEKLLEESDSDMKRKKQPVETTNYSTPMYN QGNKMKQGKAGQMIKSSVYAGALTPKESIPREAKEVENFAEGSLPSKLRTKTGFDANDDIILVK RKNIPGKDGFK(-) MGSRKDQRDICSIFRDLIFGFHRRKN*(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Chu et al., 2017

circRNA

Detail information of Os06g0645800_circ_g.1

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