Plant Circular RNA Database

Detail information of Zm00001d048741_circ_g.4

			
				
						 General Information
					

				
						CircRNA Name
						Zm00001d048741_circ_g.4
					

						ID in PlantcircBase
						zma_circ_007955
					

						Alias
						zma_circ_0001792
					

						Organism
						
							Zea mays						
					

						Position
						
							chr4: 4807320-4819738  JBrowse»						
					

						Reference genome
						
							AGPv4.38						
					

						Type  
						
							u-circRNA							
									
								

					

						Identification method
						find_circ
					

						Parent gene
						
							Zm00001d048741						
					

						Parent gene annotation
						
							Nuclear pore complex protein NUP107
							
					

						Parent gene strand
						+
					

						Alternative splicing
						
							Zm00001d048741_circ_g.1 Zm00001d048741_circ_g.2 Zm00001d048741_circ_g.3 Zm00001d048741_circ_g.5 Zm00001d048741_circ_g.6 						
					

						Support reads
						NA
					

						Tissues
						leaf, root
					

						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

					

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

					

						Number of exons covered
						Zm00001d048741_T015:4
Zm00001d048741_T093:20
Zm00001d048741_T111:19
Zm00001d048741_T084:19
Zm00001d048741_T089:20
Zm00001d048741_T003:4
Zm00001d048741_T115:21
Zm00001d048741_T072:4
Zm00001d048741_T123:18
Zm00001d048741_T116:19
Zm00001d048741_T024:4
Zm00001d048741_T006:22
Zm00001d048741_T048:4
Zm00001d048741_T050:4
Zm00001d048741_T013:4
Zm00001d048741_T098:20
Zm00001d048741_T040:4
Zm00001d048741_T029:23
Zm00001d048741_T004:22
Zm00001d048741_T125:19
Zm00001d048741_T056:4
Zm00001d048741_T101:20
Zm00001d048741_T043:4
Zm00001d048741_T127:18
Zm00001d048741_T079:4
Zm00001d048741_T087:19
Zm00001d048741_T021:4
Zm00001d048741_T002:4
Zm00001d048741_T032:4
Zm00001d048741_T104:21
Zm00001d048741_T103:19
Zm00001d048741_T054:4
Zm00001d048741_T082:4
Zm00001d048741_T018:4
Zm00001d048741_T057:4
Zm00001d048741_T012:4
Zm00001d048741_T049:4
Zm00001d048741_T107:19
Zm00001d048741_T039:4
Zm00001d048741_T088:20
Zm00001d048741_T047:4
Zm00001d048741_T085:20
Zm00001d048741_T078:22
Zm00001d048741_T001:4
Zm00001d048741_T090:19
Zm00001d048741_T061:4
Zm00001d048741_T063:4
Zm00001d048741_T046:4
Zm00001d048741_T009:10
Zm00001d048741_T027:4
Zm00001d048741_T035:4
Zm00001d048741_T007:23
Zm00001d048741_T132:18
Zm00001d048741_T005:19
Zm00001d048741_T086:19
Zm00001d048741_T110:19
Zm00001d048741_T036:3
Zm00001d048741_T045:4
Zm00001d048741_T053:4
Zm00001d048741_T038:22
Zm00001d048741_T044:4
Zm00001d048741_T106:19
Zm00001d048741_T100:18
Zm00001d048741_T096:20
Zm00001d048741_T120:19
Zm00001d048741_T017:4
Zm00001d048741_T129:18
Zm00001d048741_T081:1
Zm00001d048741_T117:17
Zm00001d048741_T118:20
Zm00001d048741_T133:14
Zm00001d048741_T109:19
Zm00001d048741_T112:21
Zm00001d048741_T065:4
Zm00001d048741_T071:4
Zm00001d048741_T067:4
Zm00001d048741_T030:9
Zm00001d048741_T020:4
Zm00001d048741_T008:4
Zm00001d048741_T083:18
Zm00001d048741_T094:20
Zm00001d048741_T121:18
Zm00001d048741_T131:19
Zm00001d048741_T041:4
Zm00001d048741_T113:21
Zm00001d048741_T091:19
Zm00001d048741_T059:4

					

			
		

General Information
CircRNA Name	Zm00001d048741_circ_g.4
ID in PlantcircBase	zma_circ_007955
Alias	zma_circ_0001792
Organism	Zea mays
Position	chr4: 4807320-4819738 JBrowse»
Reference genome	AGPv4.38
Type	u-circRNA
Identification method	find_circ
Parent gene	Zm00001d048741
Parent gene annotation	Nuclear pore complex protein NUP107
Parent gene strand	+
Alternative splicing	Zm00001d048741_circ_g.1 Zm00001d048741_circ_g.2 Zm00001d048741_circ_g.3 Zm00001d048741_circ_g.5 Zm00001d048741_circ_g.6
Support reads	NA
Tissues	leaf, root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Zm00001d048741_T015:4 Zm00001d048741_T093:20 Zm00001d048741_T111:19 Zm00001d048741_T084:19 Zm00001d048741_T089:20 Zm00001d048741_T003:4 Zm00001d048741_T115:21 Zm00001d048741_T072:4 Zm00001d048741_T123:18 Zm00001d048741_T116:19 Zm00001d048741_T024:4 Zm00001d048741_T006:22 Zm00001d048741_T048:4 Zm00001d048741_T050:4 Zm00001d048741_T013:4 Zm00001d048741_T098:20 Zm00001d048741_T040:4 Zm00001d048741_T029:23 Zm00001d048741_T004:22 Zm00001d048741_T125:19 Zm00001d048741_T056:4 Zm00001d048741_T101:20 Zm00001d048741_T043:4 Zm00001d048741_T127:18 Zm00001d048741_T079:4 Zm00001d048741_T087:19 Zm00001d048741_T021:4 Zm00001d048741_T002:4 Zm00001d048741_T032:4 Zm00001d048741_T104:21 Zm00001d048741_T103:19 Zm00001d048741_T054:4 Zm00001d048741_T082:4 Zm00001d048741_T018:4 Zm00001d048741_T057:4 Zm00001d048741_T012:4 Zm00001d048741_T049:4 Zm00001d048741_T107:19 Zm00001d048741_T039:4 Zm00001d048741_T088:20 Zm00001d048741_T047:4 Zm00001d048741_T085:20 Zm00001d048741_T078:22 Zm00001d048741_T001:4 Zm00001d048741_T090:19 Zm00001d048741_T061:4 Zm00001d048741_T063:4 Zm00001d048741_T046:4 Zm00001d048741_T009:10 Zm00001d048741_T027:4 Zm00001d048741_T035:4 Zm00001d048741_T007:23 Zm00001d048741_T132:18 Zm00001d048741_T005:19 Zm00001d048741_T086:19 Zm00001d048741_T110:19 Zm00001d048741_T036:3 Zm00001d048741_T045:4 Zm00001d048741_T053:4 Zm00001d048741_T038:22 Zm00001d048741_T044:4 Zm00001d048741_T106:19 Zm00001d048741_T100:18 Zm00001d048741_T096:20 Zm00001d048741_T120:19 Zm00001d048741_T017:4 Zm00001d048741_T129:18 Zm00001d048741_T081:1 Zm00001d048741_T117:17 Zm00001d048741_T118:20 Zm00001d048741_T133:14 Zm00001d048741_T109:19 Zm00001d048741_T112:21 Zm00001d048741_T065:4 Zm00001d048741_T071:4 Zm00001d048741_T067:4 Zm00001d048741_T030:9 Zm00001d048741_T020:4 Zm00001d048741_T008:4 Zm00001d048741_T083:18 Zm00001d048741_T094:20 Zm00001d048741_T121:18 Zm00001d048741_T131:19 Zm00001d048741_T041:4 Zm00001d048741_T113:21 Zm00001d048741_T091:19 Zm00001d048741_T059:4

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
						 Sequences
					
						Splice junction sequence  
						
							TGGAGAATGTATGTTACCAGATGCAACATCATGCACAGCTTTGACAAGTGCACTATATTCAACT
GTCAGTGAAGATGATGTGCTGCATCGCCTGTTGAAGgtggatgtccaggtctcttctagagacc
cctgctgtattgaagtcgctcttcgctgcttagcagcagaaggtgatggatatgggcttcatga
agccaacg

						Assembled circRNA sequence  
						
							NA
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

						Full-length trsnacripts
						
							NA						
					
						Genomic sequence
						
							TOO LONG (>5KB) TO SHOW GENOMIC SEQUENCE OF THIS CIRCULAR RNA. PLEASE FIND THE CORRESPONDING GENOMIC SEQUENCE AT DOWNLOAD SECTION.

Sequences
Splice junction sequence	TGGAGAATGTATGTTACCAGATGCAACATCATGCACAGCTTTGACAAGTGCACTATATTCAACT GTCAGTGAAGATGATGTGCTGCATCGCCTGTTGAAGgtggatgtccaggtctcttctagagacc cctgctgtattgaagtcgctcttcgctgcttagcagcagaaggtgatggatatgggcttcatga agccaacg
Assembled circRNA sequence	NA The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	NA
Genomic sequence	TOO LONG (>5KB) TO SHOW GENOMIC SEQUENCE OF THIS CIRCULAR RNA. PLEASE FIND THE CORRESPONDING GENOMIC SEQUENCE AT DOWNLOAD SECTION.

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.949972475

Conservation Information
Conserved circRNAs	NA
PMCS	0.949972475

			
				
						 Functional Information
					

				
						Coding potential
						Y
					

						Potential coding position
						
							4807444-4819735(+)
						
					

						Potential amino acid sequence
						
							MAAGFKGELSRFQPGVSMAISRLDAWYSDRSGSVESTAAYIIRGLCRRCCLPETILRSMQACIA
LSAAGDDLDYSLDKCDELVELVGSAESGMMHLFSQQQLQFHPKGCEGAHKPSSTQHRSLIMVVS
TLCSRLPLLPNIIVLLLFTTISDSTNSNSDLNALLSFKSLITKDPMGALSSWDGDASNRSAPHF
CRWNGVTCSSDQHGSHVTALRLRAFGLEGNISQSLGNLSHLQTLDLSNNNLEGEIPSSIGNLFA
LHFLNLSVNHLSGNVPQSIGRLSELEILNFRDNDIVGSIPSSVLNLTGLTMLSATENYMTGRIP
DWLGNLTDLTDLNLAWNNFSGQIPQALGKLPNLARLTMQGNQLEGLISPTLFNISSLENLNLGY
NKLSGSLPPDIGFTLPNIVAFSVCYNKFEGPVPSSLSNISVLQQLILHGNRFHGRIPPNIGVHG
SLTNLELGNNQLQVVDTKDWDFLTPLVNCSHLKYLNLELNNISGILPNAVSNLSYELEALLMGG
NQITGTVPSGIGRLQKLQILDLSDNLFTGAVPSSIGKLSSLDSLVLFSNKFDGEIPSSLGNLTK
LTELVLHSNDLHGSMPPSLGNMTILESIDLSYNRLSGQIPQEILSMYSLTKFLNLSNNFFSGPI
SQQIRLLISLGTMDLSSNNLSGETPHTLGSCVTLQFLYLQGNLLQGLMHFPDVIQQFERTCRNA
SESIRSAATGKLRVVEEKLMQQNAQLLLDEAASWSLWHIYGKEHEELSGELLVPPITSHQEACR
FVAADITAQLCLRIILWLEGLASEALDLEKKVRGPHVGSYLPSSGVWHRTQRYLKRNNADSTIV
KHVDFDAPTREGAQLLPDDKKQDELLLEDIWTLLRAGRLEEASDLCRSAGQAWRVATLCPFGGI
NMFPSLNALHKNGKYRTLQAMELESGVGRQWRLWKWASYCASEKIAEQDGGRYEMAVYALQCTC
WAMARSWLDVQVDLELSQYQTSRPEKQLDDDMNGAQSSVGPESWPYHVLDQQPHDLTALLQKLH
SSDLVHETVSRACREQHRQIQMNLMSGNISHLLDLLWSWLSPAEENHNNTARPLDDPEMIRFGA
HIVLVLRHLFSDGMDDELDEKLVTVGDLIINMYVRYLFSEDQEELVGIYASQLQHDLCITLFVE
MMELRLNSSLHTMYKLFLSAVEYLPFSSDNVSKACFEEIIERVLSRSRQTKPTKYDGDFSDVAH
QHHLQSLQKAMVIQWLCFTPPSSIPDFQMISWKLLIRALTHSNTLFREFSLISMRRVPELPAGP
HKLLAILAEPLKQKENLISREDPEVSDNLPEFEDWHEYYSLDATYRSWLKIEMMNAAVSPEMLS
AEEKGDGRPWLYAVESSPFESPDVIFLELHASAMLCLPSGECMLPDATSCTALTSALYSTVSED
DVLHRLLKVDVQVSSRDPCCIEVALRCLAAEGDGYGLHEANDGGLLAAVMAAGFKGELSRFQPG
VSMAISRLDAWYSDRSGSVESTAAYIIRGLCRRCCLPETILRSMQACIALSAAGDDLDYSLDKC
DELVELVGSAESGMMHLFSQQQLQFHPKGCEGAHKPSSTQHRSLIMVVSTLCSRLPLLPNIIVL
LLFTTISDSTNSNSDLNALLSFKSLITKDPMGALSSWDGDASNRSAPHFCRWNGVTCSSDQHGS
HVTALRLRAFGLEGNISQSLGNLSHLQTLDLSNNNLEGEIPSSIGNLFALHFLNLSVNHLSGNV
PQSIGRLSELEILNFRDNDIVGSIPSSVLNLTGLTMLSATENYMTGRIPDWLGNLTDLTDLNLA
WNNFSGQIPQALGKLPNLARLTMQGNQLEGLISPTLFNISSLENLNLGYNKLSGSLPPDIGFTL
PNIVAFSVCYNKFEGPVPSSLSNISVLQQLILHGNRFHGRIPPNIGVHGSLTNLELGNNQLQVV
DTKDWDFLTPLVNCSHLKYLNLELNNISGILPNAVSNLSYELEALLMGGNQITGTVPSGIGRLQ
KLQILDLSDNLFTGAVPSSIGKLSSLDSLVLFSNKFDGEIPSSLGNLTKLTELVLHSNDLHGSM
PPSLGNMTILESIDLSYNRLSGQIPQEILSMYSLTKFLNLSNNFFSGPISQQIRLLISLGTMDL
SSNNLSGETPHTLGSCVTLQFLYLQGNLLQGLMHFPDVIQQFERTCRNASESIRSAATGKLRVV
EEKLMQQNAQLLLDEAASWSLWHIYGKEHEELSGELLVPPITSHQEACRFVAADITAQLCLRII
LWLEGLASEALDLEKKVRGPHVGSYLPSSGVWHRTQRYLKRNNADSTIVKHVDFDAPTREGAQL
LPDDKKQDELLLEDIWTLLRAGRLEEASDLCRSAGQAWRVATLCPFGGINMFPSLNALHKNGKY
RTLQAMELESGVGRQWRLWKWASYCASEKIAEQDGGRYEMAVYALQCTCWAMARSWLDVQVDLE
LSQYQTSRPEKQLDDDMNGAQSSVGPESWPYHVLDQQPHDLTALLQKLHSSDLVHETVSRACRE
QHRQIQMNLMSGNISHLLDLLWSWLSPAEENHNNTARPLDDPEMIRFGAHIVLVLRHLFSDGMD
DELDEKLVTVGDLIINMYVRYLFSEDQEELVGIYASQLQHDLCITLFVEMMELRLNSSLHTMYK
LFLSAVEYLPFSSDNVSKACFEEIIERVLSRSRQTKPTKYDGDFSDVAHQHHLQSLQKAMVIQW
LCFTPPSSIPDFQMISWKLLIRALTHSNTLFREFSLISMRRVPELPAGPHKLLAILAEPLKQKE
NLISREDPEVSDNLPEFEDWHEYYSLDATYRSWLKIEMMNAAVSPEMLSAEEKGDGRPWLYAVE
SSPFESPDVIFLELHASAMLCLPSGECMLPDATSCTALTSALYSTVSEDDVLHRLLKVDVQVSS
RDPCCIEVALRCLAAEGDGYGLHEANDGGLLAAVMAAGFKGELSRFQPGVSMAISRLDAWYSDR
SGSVESTAAYIIRGLCRRCCLPETILRSMQACIALSAAGDDLDYSLDKCDELVELVGSAESGMM
HLFSQQQLQFHPKGCEGAHKPSSTQHRSLIMVVSTLCSRLPLLPNIIVLLLFTTISDSTNSNSD
LNALLSFKSLITKDPMGALSSWDGDASNRSAPHFCRWNGVTCSSDQHGSHVTALRLRAFGLEGN
ISQSLGNLSHLQTLDLSNNNLEGEIPSSIGNLFALHFLNLSVNHLSGNVPQSIGRLSELEILNF
RDNDIVGSIPSSVLNLTGLTMLSATENYMTGRIPDWLGNLTDLTDLNLAWNNFSGQIPQALGKL
PNLARLTMQGNQLEGLISPTLFNISSLENLNLGYNKLSGSLPPDIGFTLPNIVAFSVCYNKFEG
PVPSSLSNISVLQQLILHGNRFHGRIPPNIGVHGSLTNLELGNNQLQVVDTKDWDFLTPLVNCS
HLKYLNLELNNISGILPNAVSNLSYELEALLMGGNQITGTVPSGIGRLQKLQILDLSDNLFTGA
VPSSIGKLSSLDSLVLFSNKFDGEIPSSLGNLTKLTELVLHSNDLHGSMPPSLGNMTILESIDL
SYNRLSGQIPQEILSMYSLTKFLNLSNNFFSGPISQQIRLLISLGTMDLSSNNLSGETPHTLGS
CVTLQFLYLQGNLLQGLMHFPDVIQQFERTCRNASESIRSAATGKLRVVEEKLMQQNAQLLLDE
AASWSLWHIYGKEHEELSGELLVPPITSHQEACRFVAADITAQLCLRIILWLEGLASEALDLEK
KVRGPHVGSYLPSSGVWHRTQRYLKRNNADSTIVKHVDFDAPTREGAQLLPDDKKQDELLLEDI
WTLLRAGRLEEASDLCRSAGQAWRVATLCPFGGINMFPSLNALHKNGKYRTLQAMELESGVGRQ
WRLWKWASYCASEKIAEQDGGRYEMAVYALQCTCWAMARSWLDVQVDLELSQYQTSRPEKQLDD
DMNGAQSSVGPESWPYHVLDQQPHDLTALLQKLHSSDLVHETVSRACREQHRQIQMNLMSGNIS
HLLDLLWSWLSPAEENHNNTARPLDDPEMIRFGAHIVLVLRHLFSDGMDDELDEKLVTVGDLII
NMYVRYLFSEDQEELVGIYASQLQHDLCITLFVEMMELRLNSSLHTMYKLFLSAVEYLPFSSDN
VSKACFEEIIERVLSRSRQTKPTKYDGDFSDVAHQHHLQSLQKAMVIQWLCFTPPSSIPDFQMI
SWKLLIRALTHSNTLFREFSLISMRRVPELPAGPHKLLAILAEPLKQKENLISREDPEVSDNLP
EFEDWHEYYSLDATYRSWLKIEMMNAAVSPEMLSAEEKGDGRPWLYAVESSPFESPDVIFLELH
ASAMLCLPSGECMLPDATSCTALTSALYSTVSEDDVLHRLLKVDVQVSSRDPCCIEVALRCLAA
EGDGYGLHEANDGGLLAAVMAAGFKGELSRFQPGVSMAISRLDAWYSDRSGSVESTAAYIIRGL
CRRCCLPETILRSMQACIALSAAGDDLDYSLDKCDELVELVGSAESGMMHLFSQQQLQFHPKGC
EGAHKPSSTQHRSLIMVVSTLCSRLPLLPNIIVLLLFTTISDSTNSNSDLNALLSFKSLITKDP
MGALSSWDGDASNRSAPHFCRWNGVTCSSDQHGSHVTALRLRAFGLEGNISQSLGNLSHLQTLD
LSNNNLEGEIPSSIGNLFALHFLNLSVNHLSGNVPQSIGRLSELEILNFRDNDIVGSIPSSVLN
LTGLTMLSATENYMTGRIPDWLGNLTDLTDLNLAWNNFSGQIPQALGKLPNLARLTMQGNQLEG
LISPTLFNISSLENLNLGYNKLSGSLPPDIGFTLPNIVAFSVCYNKFEGPVPSSLSNISVLQQL
ILHGNRFHGRIPPNIGVHGSLTNLELGNNQLQVVDTKDWDFLTPLVNCSHLKYLNLELNNISGI
LPNAVSNLSYELEALLMGGNQITGTVPSGIGRLQKLQILDLSDNLFTGAVPSSIGKLSSLDSLV
LFSNKFDGEIPSSLGNLTKLTELVLHSNDLHGSMPPSLGNMTILESIDLSYNRLSGQIPQEILS
MYSLTKFLNLSNNFFSGPISQQIRLLISLGTMDLSSNNLSGETPHTLGSCVTLQFLYLQGNLLQ
GLMHFPDVIQQFERTCRNASESIRSAATGKLRVVEEKLMQQNAQLLLDEAASWSLWHIYGKEHE
ELSGELLVPPITSHQEACRFVAADITAQLCLRIILWLEGLASEALDLEKKVRGPHVGSYLPSSG
VWHRTQRYLKRNNADSTIVKHVDFDAPTREGAQLLPDDKKQDELLLEDIWTLLRAGRLEEASDL
CRSAGQAWRVATLCPFGGINMFPSLNALHKNGKYRTLQAMELESGVGRQWRLWKWASYCASEKI
AEQDGGRYEMAVYALQCTCWAMARSWLDVQVDLELSQYQTSRPEKQLDDDMNGAQSSVGPESWP
YHVLDQQPHDLTALLQKLHSSDLVHETVSRACREQHRQIQMNLMSGNISHLLDLLWSWLSPAEE
NHNNTARPLDDPEMIRFGAHIVLVLRHLFSDGMDDELDEKLVTVGDLIINMYVRYLFSEDQEEL
VGIYASQLQHDLCITLFVEMMELRLNSSLHTMYKLFLSAVEYLPFSSDNVSKACFEEIIERVLS
RSRQTKPTKYDGDFSDVAHQHHLQSLQKAMVIQWLCFTPPSSIPDFQMISWKLLIRALTHSNTL
FREFSLISMRRVPELPAGPHKLLAILAEPLKQKENLISREDPEVSDNLPEFEDWHEYYSLDATY
RSWLKIEMMNAAVSPEMLSAEEKGDGRPWLYAVESSPFESPDVIFLELHASAMLCLPSGECMLP
DATSCTALTSALYSTVSEDDVLHRLLK(+)
						
					

						Sponge-miRNAs
						
							NA						
					

						circRNA-miRNA-mRNA network
						 VISUALIZATION
					

						Potential function description
						NA
					

			
		

Functional Information
Coding potential	Y
Potential coding position	4807444-4819735(+)
Potential amino acid sequence	MAAGFKGELSRFQPGVSMAISRLDAWYSDRSGSVESTAAYIIRGLCRRCCLPETILRSMQACIA LSAAGDDLDYSLDKCDELVELVGSAESGMMHLFSQQQLQFHPKGCEGAHKPSSTQHRSLIMVVS TLCSRLPLLPNIIVLLLFTTISDSTNSNSDLNALLSFKSLITKDPMGALSSWDGDASNRSAPHF CRWNGVTCSSDQHGSHVTALRLRAFGLEGNISQSLGNLSHLQTLDLSNNNLEGEIPSSIGNLFA LHFLNLSVNHLSGNVPQSIGRLSELEILNFRDNDIVGSIPSSVLNLTGLTMLSATENYMTGRIP DWLGNLTDLTDLNLAWNNFSGQIPQALGKLPNLARLTMQGNQLEGLISPTLFNISSLENLNLGY NKLSGSLPPDIGFTLPNIVAFSVCYNKFEGPVPSSLSNISVLQQLILHGNRFHGRIPPNIGVHG SLTNLELGNNQLQVVDTKDWDFLTPLVNCSHLKYLNLELNNISGILPNAVSNLSYELEALLMGG NQITGTVPSGIGRLQKLQILDLSDNLFTGAVPSSIGKLSSLDSLVLFSNKFDGEIPSSLGNLTK LTELVLHSNDLHGSMPPSLGNMTILESIDLSYNRLSGQIPQEILSMYSLTKFLNLSNNFFSGPI SQQIRLLISLGTMDLSSNNLSGETPHTLGSCVTLQFLYLQGNLLQGLMHFPDVIQQFERTCRNA SESIRSAATGKLRVVEEKLMQQNAQLLLDEAASWSLWHIYGKEHEELSGELLVPPITSHQEACR FVAADITAQLCLRIILWLEGLASEALDLEKKVRGPHVGSYLPSSGVWHRTQRYLKRNNADSTIV KHVDFDAPTREGAQLLPDDKKQDELLLEDIWTLLRAGRLEEASDLCRSAGQAWRVATLCPFGGI NMFPSLNALHKNGKYRTLQAMELESGVGRQWRLWKWASYCASEKIAEQDGGRYEMAVYALQCTC WAMARSWLDVQVDLELSQYQTSRPEKQLDDDMNGAQSSVGPESWPYHVLDQQPHDLTALLQKLH SSDLVHETVSRACREQHRQIQMNLMSGNISHLLDLLWSWLSPAEENHNNTARPLDDPEMIRFGA HIVLVLRHLFSDGMDDELDEKLVTVGDLIINMYVRYLFSEDQEELVGIYASQLQHDLCITLFVE MMELRLNSSLHTMYKLFLSAVEYLPFSSDNVSKACFEEIIERVLSRSRQTKPTKYDGDFSDVAH QHHLQSLQKAMVIQWLCFTPPSSIPDFQMISWKLLIRALTHSNTLFREFSLISMRRVPELPAGP HKLLAILAEPLKQKENLISREDPEVSDNLPEFEDWHEYYSLDATYRSWLKIEMMNAAVSPEMLS AEEKGDGRPWLYAVESSPFESPDVIFLELHASAMLCLPSGECMLPDATSCTALTSALYSTVSED DVLHRLLKVDVQVSSRDPCCIEVALRCLAAEGDGYGLHEANDGGLLAAVMAAGFKGELSRFQPG VSMAISRLDAWYSDRSGSVESTAAYIIRGLCRRCCLPETILRSMQACIALSAAGDDLDYSLDKC DELVELVGSAESGMMHLFSQQQLQFHPKGCEGAHKPSSTQHRSLIMVVSTLCSRLPLLPNIIVL LLFTTISDSTNSNSDLNALLSFKSLITKDPMGALSSWDGDASNRSAPHFCRWNGVTCSSDQHGS HVTALRLRAFGLEGNISQSLGNLSHLQTLDLSNNNLEGEIPSSIGNLFALHFLNLSVNHLSGNV PQSIGRLSELEILNFRDNDIVGSIPSSVLNLTGLTMLSATENYMTGRIPDWLGNLTDLTDLNLA WNNFSGQIPQALGKLPNLARLTMQGNQLEGLISPTLFNISSLENLNLGYNKLSGSLPPDIGFTL PNIVAFSVCYNKFEGPVPSSLSNISVLQQLILHGNRFHGRIPPNIGVHGSLTNLELGNNQLQVV DTKDWDFLTPLVNCSHLKYLNLELNNISGILPNAVSNLSYELEALLMGGNQITGTVPSGIGRLQ KLQILDLSDNLFTGAVPSSIGKLSSLDSLVLFSNKFDGEIPSSLGNLTKLTELVLHSNDLHGSM PPSLGNMTILESIDLSYNRLSGQIPQEILSMYSLTKFLNLSNNFFSGPISQQIRLLISLGTMDL SSNNLSGETPHTLGSCVTLQFLYLQGNLLQGLMHFPDVIQQFERTCRNASESIRSAATGKLRVV EEKLMQQNAQLLLDEAASWSLWHIYGKEHEELSGELLVPPITSHQEACRFVAADITAQLCLRII LWLEGLASEALDLEKKVRGPHVGSYLPSSGVWHRTQRYLKRNNADSTIVKHVDFDAPTREGAQL LPDDKKQDELLLEDIWTLLRAGRLEEASDLCRSAGQAWRVATLCPFGGINMFPSLNALHKNGKY RTLQAMELESGVGRQWRLWKWASYCASEKIAEQDGGRYEMAVYALQCTCWAMARSWLDVQVDLE LSQYQTSRPEKQLDDDMNGAQSSVGPESWPYHVLDQQPHDLTALLQKLHSSDLVHETVSRACRE QHRQIQMNLMSGNISHLLDLLWSWLSPAEENHNNTARPLDDPEMIRFGAHIVLVLRHLFSDGMD DELDEKLVTVGDLIINMYVRYLFSEDQEELVGIYASQLQHDLCITLFVEMMELRLNSSLHTMYK LFLSAVEYLPFSSDNVSKACFEEIIERVLSRSRQTKPTKYDGDFSDVAHQHHLQSLQKAMVIQW LCFTPPSSIPDFQMISWKLLIRALTHSNTLFREFSLISMRRVPELPAGPHKLLAILAEPLKQKE NLISREDPEVSDNLPEFEDWHEYYSLDATYRSWLKIEMMNAAVSPEMLSAEEKGDGRPWLYAVE SSPFESPDVIFLELHASAMLCLPSGECMLPDATSCTALTSALYSTVSEDDVLHRLLKVDVQVSS RDPCCIEVALRCLAAEGDGYGLHEANDGGLLAAVMAAGFKGELSRFQPGVSMAISRLDAWYSDR SGSVESTAAYIIRGLCRRCCLPETILRSMQACIALSAAGDDLDYSLDKCDELVELVGSAESGMM HLFSQQQLQFHPKGCEGAHKPSSTQHRSLIMVVSTLCSRLPLLPNIIVLLLFTTISDSTNSNSD LNALLSFKSLITKDPMGALSSWDGDASNRSAPHFCRWNGVTCSSDQHGSHVTALRLRAFGLEGN ISQSLGNLSHLQTLDLSNNNLEGEIPSSIGNLFALHFLNLSVNHLSGNVPQSIGRLSELEILNF RDNDIVGSIPSSVLNLTGLTMLSATENYMTGRIPDWLGNLTDLTDLNLAWNNFSGQIPQALGKL PNLARLTMQGNQLEGLISPTLFNISSLENLNLGYNKLSGSLPPDIGFTLPNIVAFSVCYNKFEG PVPSSLSNISVLQQLILHGNRFHGRIPPNIGVHGSLTNLELGNNQLQVVDTKDWDFLTPLVNCS HLKYLNLELNNISGILPNAVSNLSYELEALLMGGNQITGTVPSGIGRLQKLQILDLSDNLFTGA VPSSIGKLSSLDSLVLFSNKFDGEIPSSLGNLTKLTELVLHSNDLHGSMPPSLGNMTILESIDL SYNRLSGQIPQEILSMYSLTKFLNLSNNFFSGPISQQIRLLISLGTMDLSSNNLSGETPHTLGS CVTLQFLYLQGNLLQGLMHFPDVIQQFERTCRNASESIRSAATGKLRVVEEKLMQQNAQLLLDE AASWSLWHIYGKEHEELSGELLVPPITSHQEACRFVAADITAQLCLRIILWLEGLASEALDLEK KVRGPHVGSYLPSSGVWHRTQRYLKRNNADSTIVKHVDFDAPTREGAQLLPDDKKQDELLLEDI WTLLRAGRLEEASDLCRSAGQAWRVATLCPFGGINMFPSLNALHKNGKYRTLQAMELESGVGRQ WRLWKWASYCASEKIAEQDGGRYEMAVYALQCTCWAMARSWLDVQVDLELSQYQTSRPEKQLDD DMNGAQSSVGPESWPYHVLDQQPHDLTALLQKLHSSDLVHETVSRACREQHRQIQMNLMSGNIS HLLDLLWSWLSPAEENHNNTARPLDDPEMIRFGAHIVLVLRHLFSDGMDDELDEKLVTVGDLII NMYVRYLFSEDQEELVGIYASQLQHDLCITLFVEMMELRLNSSLHTMYKLFLSAVEYLPFSSDN VSKACFEEIIERVLSRSRQTKPTKYDGDFSDVAHQHHLQSLQKAMVIQWLCFTPPSSIPDFQMI SWKLLIRALTHSNTLFREFSLISMRRVPELPAGPHKLLAILAEPLKQKENLISREDPEVSDNLP EFEDWHEYYSLDATYRSWLKIEMMNAAVSPEMLSAEEKGDGRPWLYAVESSPFESPDVIFLELH ASAMLCLPSGECMLPDATSCTALTSALYSTVSEDDVLHRLLKVDVQVSSRDPCCIEVALRCLAA EGDGYGLHEANDGGLLAAVMAAGFKGELSRFQPGVSMAISRLDAWYSDRSGSVESTAAYIIRGL CRRCCLPETILRSMQACIALSAAGDDLDYSLDKCDELVELVGSAESGMMHLFSQQQLQFHPKGC EGAHKPSSTQHRSLIMVVSTLCSRLPLLPNIIVLLLFTTISDSTNSNSDLNALLSFKSLITKDP MGALSSWDGDASNRSAPHFCRWNGVTCSSDQHGSHVTALRLRAFGLEGNISQSLGNLSHLQTLD LSNNNLEGEIPSSIGNLFALHFLNLSVNHLSGNVPQSIGRLSELEILNFRDNDIVGSIPSSVLN LTGLTMLSATENYMTGRIPDWLGNLTDLTDLNLAWNNFSGQIPQALGKLPNLARLTMQGNQLEG LISPTLFNISSLENLNLGYNKLSGSLPPDIGFTLPNIVAFSVCYNKFEGPVPSSLSNISVLQQL ILHGNRFHGRIPPNIGVHGSLTNLELGNNQLQVVDTKDWDFLTPLVNCSHLKYLNLELNNISGI LPNAVSNLSYELEALLMGGNQITGTVPSGIGRLQKLQILDLSDNLFTGAVPSSIGKLSSLDSLV LFSNKFDGEIPSSLGNLTKLTELVLHSNDLHGSMPPSLGNMTILESIDLSYNRLSGQIPQEILS MYSLTKFLNLSNNFFSGPISQQIRLLISLGTMDLSSNNLSGETPHTLGSCVTLQFLYLQGNLLQ GLMHFPDVIQQFERTCRNASESIRSAATGKLRVVEEKLMQQNAQLLLDEAASWSLWHIYGKEHE ELSGELLVPPITSHQEACRFVAADITAQLCLRIILWLEGLASEALDLEKKVRGPHVGSYLPSSG VWHRTQRYLKRNNADSTIVKHVDFDAPTREGAQLLPDDKKQDELLLEDIWTLLRAGRLEEASDL CRSAGQAWRVATLCPFGGINMFPSLNALHKNGKYRTLQAMELESGVGRQWRLWKWASYCASEKI AEQDGGRYEMAVYALQCTCWAMARSWLDVQVDLELSQYQTSRPEKQLDDDMNGAQSSVGPESWP YHVLDQQPHDLTALLQKLHSSDLVHETVSRACREQHRQIQMNLMSGNISHLLDLLWSWLSPAEE NHNNTARPLDDPEMIRFGAHIVLVLRHLFSDGMDDELDEKLVTVGDLIINMYVRYLFSEDQEEL VGIYASQLQHDLCITLFVEMMELRLNSSLHTMYKLFLSAVEYLPFSSDNVSKACFEEIIERVLS RSRQTKPTKYDGDFSDVAHQHHLQSLQKAMVIQWLCFTPPSSIPDFQMISWKLLIRALTHSNTL FREFSLISMRRVPELPAGPHKLLAILAEPLKQKENLISREDPEVSDNLPEFEDWHEYYSLDATY RSWLKIEMMNAAVSPEMLSAEEKGDGRPWLYAVESSPFESPDVIFLELHASAMLCLPSGECMLP DATSCTALTSALYSTVSEDDVLHRLLK(+)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Ma et al., 2021b

circRNA

Detail information of Zm00001d048741_circ_g.4

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