Detailed infomation of each circRNA
General Information | |
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CircRNA Name | AT4G25610_circ_g.3 |
ID in PlantcircBase | ath_circ_032783 |
Alias | 4:13063792-13064586 |
Organism | Arabidpsis thaliana |
Position | chr4: 13063792-13064586 JBrowse» |
Reference genome | TAIR10.38 |
Type | ue-circRNA |
Identification method | find_circ; CIRI2 |
Parent gene | AT4G25610 |
Parent gene annotation |
C2H2-like zinc finger protein |
Parent gene strand | + |
Alternative splicing | AT4G25610_circ_g.2 AT4G25610_circ_g.4 AT4G25610_circ_g.5 AT4G25610_circ_g.6 |
Support reads | 1/1/1 |
Tissues | root |
Exon boundary | Yes-Yes |
Splicing signals | GT-AG |
Number of exons covered | AT4G25610.1:4 AT4G25610.3:4 AT4G25610.2:4 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.133796813 |
Functional Information | |
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Coding potential | NA |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Philips et al., 2020 |