| CircRNA Name |
AT4G14340_circ_g.6 |
| ID in PlantcircBase |
ath_circ_030882 |
| Alias |
At_ciR1252, Ath_circ_FC2642, AT4G14340_C2 |
| Organism |
Arabidpsis thaliana |
| Position |
chr4: 8249657-8250558 JBrowse» |
| Reference genome |
TAIR10.38 |
| Type |
e-circRNA
|
| Identification method |
CIRCexplorer, KNIFE, PcircRNA_finder, find_circ, CIRI2 |
| Parent gene |
AT4G14340 |
| Parent gene annotation |
Casein kinase 1-like protein 11
|
| Parent gene strand |
- |
| Alternative splicing |
AT4G14340_circ_g.1 AT4G14340_circ_g.2 AT4G14340_circ_g.3 AT4G14340_circ_g.4 AT4G14340_circ_g.5 AT4G14340_circ_g.7 AT4G14340_circ_g.8 AT4G14340_circ_g.9 AT4G14340_circ_g.10 AT4G14340_circ_g.11 AT4G14340_circ_g.12 |
| Support reads |
4/2 |
| Tissues |
leaf/leaf, aerial, inflorescences, whole_plant |
| Exon boundary |
Yes-Yes
"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
|
| Splicing signals |
CT-AC
The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
|
| Number of exons covered |
AT4G14340.2:5
AT4G14340.1:5
|
