Detail information of BGIOSGA032660_circ_ig.2


General Information
CircRNA Name BGIOSGA032660_circ_ig.2
ID in PlantcircBase osi_circ_008843
Alias Chr10:8243241_8244487(MH63RS2)
Organism Oryza sativa ssp. indica
Position chr10: 6063605-6064851  JBrowse»
Reference genome Oryza_indica.ASM465v1.42
Type   ig-circRNA
Identification method CIRCexplorer2
Parent gene NA
Parent gene annotation NA
Parent gene strand NA
Alternative splicing BGIOSGA032660_circ_ig.1
Support reads NA
Tissues root, leaf, panicle
Exon boundary   NA-NA
Splicing signals   CT-TG
Number of exons covered NA
Experimental Information
Sanger sequencing for BSS   NA
PCR primers for BSS    NA
Sanger sequencing for FL    NA
PCR primers for FL    NA
Sequences
Splice junction sequence   ATCCCACATTTTGCAATGTCGCGTGTAATTTATAAACAATATAGCATTTGCAAAAATATAGGAT
TTAACATGTTCGAAGGAGGAATTGAATAGGACTTGCggaagcctatgtctattgcaagctgaga
tcaaacgaggctatgtttgtggactaaatttcagcataaagcaaattttgattcacagtagtaa
gtagtaat
Assembled circRNA sequence   NA
Full-length trsnacripts NA
Genomic sequence GGAAGCCTATGTCTATTGCAAGCTGAGATCAAACGAGGCTATGTTTGTGGACTAAATTTCAGCA
TAAAGCAAATTTTGATTCACAGTAGTAAGTAGTAATAGATTGCAACAAAATTTGTAAAGCAATA
AGTAAACAATAGTAGTAGTAACATAAGCATCATATTAATATCATCCTTGTGCCCTCCATGGCAA
CAAGTAACCATTTCACTTTCAGCCCACACCGAGCAAAGTCATCACCAATTTCCCACCATGCCAA
TTTCACAAAACATTTATTAAACCACCAACACTATACTTGTATCATTTCACCAAGTCGCTCGTGA
CCGTGAGCACGGCTAATCAATTAGTTCGACACCCTGCAGAGGCTGTGCACTATACCCACATGAC
ATAAACTAGCAACCATGTAAACCATGTCACGCGATACCAAATGGTACCCGATTTGCTAGCATAT
GACGAAGTTACTACATTACTCAAGCCTAACCTTGCATGAGCATGGCCAGTGTATACCCACACTA
GGAGCAACCCTAGTGCCGCTAGTCCAGGGGGCCTTCGCTGGTACTAGCGTCGTGAAGTGAACCA
TCCGTTCCCTCAACGAGGCACTTAACCGTTATATTGGATACGCTTAGACGCCTAGGCATAAACC
GCACTAGGTAGCTCCTATAAACCATCATTCCGACTAGTCCATACTACTACGGCCTCCCAATGCA
AGGTTAGACATTAAGCAACTTCATAACTAAGGTTACCCTATAAATAACACATGTGGTTGCACTG
TAAATCTTAGTTGGTGACACATAGCTCGGTCCTTAATCGACTCGGGCAAACACTCCCCCTATCG
GTATGCAACTACCACCATATGCACACCACTTGCCGCCCAAGTCTAAAATCATCACTTTTCAGTT
TTCAACTTCACAAATAACAGAGGCGACACCTCTGTCCAACATTTTCAAATAGCCCAAATTTTGA
AGAGTGAATGATCCACCATTTGTAACATACGAAACTCTAAGCATGGCTAAGCAATAGCTATATT
AGTAGTGCGAATATACCCAAATTGGTACTTGGACAGTACCACAGCCCATCCTAGATGTATCAAC
AGTAACATAATCAATAATCAAGGAGGATAAGTGCAGCAAATAGGAGTTGCTCTACCGAAATCCC
ACATTTTGCAATGTCGCGTGTAATTTATAAACAATATAGCATTTGCAAAAATATAGGATTTAAC
ATGTTCGAAGGAGGAATTGAATAGGACTTGC
Conservation Information
Conserved circRNAs NA
PMCS
Functional Information
Coding potential N
Potential coding position NA
Potential amino acid sequence NA
Sponge-miRNAs NA
circRNA-miRNA-mRNA network  VISUALIZATION
Potential function description NA
Other Information
References Zhou et al., 2021