Detailed infomation of each circRNA
General Information | |
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CircRNA Name | AT1G23310_circ_g.22 |
ID in PlantcircBase | ath_circ_004044 |
Alias | AT1G23310_C1 |
Organism | Arabidpsis thaliana |
Position | chr1: 8271213-8271373 JBrowse» |
Reference genome | TAIR10.38 |
Type | ue-circRNA |
Identification method | PcircRNA_finder, CIRI2 |
Parent gene | AT1G23310 |
Parent gene annotation |
Glutamate--glyoxylate aminotransferase 1 |
Parent gene strand | - |
Alternative splicing | NA |
Support reads | 356 |
Tissues | whole_plant, leaf |
Exon boundary | Yes-Yes |
Splicing signals | CT-AC |
Number of exons covered | AT1G23310.2:1 AT1G23310.1:1 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.426017981 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | response to drought stress |
Other Information | |
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References | Chu et al., 2017;Zhang et al., 2019 |