Plant Circular RNA Database

Detail information of Solyc03g119140.2_circ_g.1

			
						 General Information
					
						CircRNA Name
						Solyc03g119140.2_circ_g.1
					
						ID in PlantcircBase
						sly_circ_001192
					
						Alias
						NA
					
						Organism
						
							Solanum lycopersicum						
					
						Position
						
							chr3: 67839821-67844179  JBrowse»						
					
						Reference genome
						
							SL2.50.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						CIRI
					
						Parent gene
						
							Solyc03g119140.2						
					
						Parent gene annotation
						
							protein_coding
							
						Parent gene strand
						+
					
						Alternative splicing
						
							Solyc03g119140.2_circ_g.2 						
					
						Support reads
						2
					
						Tissues
						fruit
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Solyc03g119140.2.1:8

General Information
CircRNA Name	Solyc03g119140.2_circ_g.1
ID in PlantcircBase	sly_circ_001192
Alias	NA
Organism	Solanum lycopersicum
Position	chr3: 67839821-67844179 JBrowse»
Reference genome	SL2.50.38
Type	e-circRNA
Identification method	CIRI
Parent gene	Solyc03g119140.2
Parent gene annotation	protein_coding
Parent gene strand	+
Alternative splicing	Solyc03g119140.2_circ_g.2
Support reads	2
Tissues	fruit
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Solyc03g119140.2.1:8

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							TCCCATTTAACACAACTATTTGTGACTCTAGGTATGTGATTTTGGGTTATCGAAAATAAAGCAC
AGCACCTTCCTATCTTCAAGATCAACTGCTGGGACGgttttggctgatagtgtggggctcccgt
gtcgattagtaaaagggcaagaatacacaggttcatatgaagttgcaatgaactatgtaaagct
tgaagatg

									
								

					

						Assembled circRNA sequence  
						
							NA
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							NA						
					

						Genomic sequence
						
							GTTTTGGCTGATAGTGTGGGGCTCCCGTGTCGATTAGTAAAAGGGCAAGAATACACAGGTTCAT
ATGAAGTTGCAATGAACTATGTAAAGCTTGAAGATGGAAGGTTCCTTCTCTCTAGTGTTCTTCC
TTATTCAGATTTTCTAATTTCATTTCCGATTCCTATGTGTTTGTACCATAGTTTGTATATAGTC
AGGTAGCATTTCGATGAGCAAGGTATATGTTAAGTTTTCAAGGCAGAGTGCTGGATAAATCTTC
TTTGTTATTAAATACATATTTTTTGACAAGTCAAATACATAAACTTATCTTTAAGGTAGTAAGG
TGATCATTTGAAACATATAATCTGTTTCTCTTATTTCTTAAGATTGTTGCAGTTTTTATTTGCT
GGGAGTATAAATTTGAATTCACCTTGGTGGAAAAGTTTGTTCAGGCATATAATTACTCCTCCCA
AGGTTGCCTCTTTGCTTACGAAGTCATACGCTTTGCAGGGAATATATTGTTGATTTGATGGCCG
ACCCTGGCACACTTATTCCCTCTGATACATCTGGAACACAGGGAGACTATGAGGAATCCATCCT
CTCCATCAGTCCATCATCCAAAGATGTTGATTCTCATACGGGTTCTTCTAGTAGTGGGGTTGCC
TGTTCTTCAGAAGATCATTCAGAGTATGGAACCGAAGAGAGGAAATCCAGGTTTGGGGAAATCA
GTGCAGGAAATGAGTCTCCCTCTACAGGTAATTCAGAAAAGCAGAAAGGAAATAATAACTCTGA
TGACTTCACAAAGCTTCGTACTGTGAAGGAGCAAGGGCCGGAAACTTCATCCAGGACTGTGTAT
GCAAGATCTCCTTATTCACATACAAGATCTCCTTCCTGGACTGAAGGCATTAGTTCCCCAGCTG
TACGGCGAATGAAAGCGAAGGATGTCTCACTGTACATGATTGATGCTGCTAAAGAAAATCCTCA
GCTAGCTCAAAAACTACATGATGTCTTGCTTGAAAGTGGTGTTGTTGCACCCCCAAATTTGTTC
ACTGAAGTCTATTCAGAGCAATTAGATTCCTCTCCTGTGGAGGGAAAATCCAGGCCAGAGGATA
TGGAAAGTCAGGGAAGGGATGAGGTTGAGAAAATCAAGAGTCAAGTTGATCTAGATTGTAATAA
TTTCTTGCCTCCTTTGGCTTATCATGCCCAGTCCAAGGTCAATCCCCGTGGGCCATTTGATCCT
CATCTGGATGGTGGAGAAGTTAGTGGGCAGCATGTTTCCCCACACTCTGAGCTGGCTGCAGCGA
AATTCACGAAAAACATGCCTGTTGCTGCAGCTGCAGCTGCTGCAGCAGCTGTGGTGGCGTCTTC
AATGGTAGCTGCTGCAGCAAAGACCACATATGGTTCAAAAGCTGATCTCCCTGTTGCAGCTGCT
GTGACAGCCACAGCTGCAGCAGTGGTAGCAACAACTGCTGCTGTCGCTAAGCAATATGAAAACT
TGGAGACATCTGCTCTTTTACCAAATAGTCCTGCTTTCTTACTTAATTTAATGGACTCTAAAAG
AGTTGATAAAGATGCAGATGGTGCTGTGCCTGAAAAACGGGGTAGTGGTGATCAAGTGCATGAG
GCATTAGGAGTGAATTCTGAGGGTGAAAGAGTATCAGATAGATCAACCGGTAATGATAGTGTGA
AATCTGATGTGACACTTGATGATGTCGCAGATTGTGAGATTCCAATGGAGGAGATCACCTTGGG
TGAGCGTATCGGACTTGGTATTGACCTGCATTGTATATTTCTAATCATACAAGCATCCATGAAG
CAGTTTAACTCCTTGTCATCTTACATTTTGACTTATCTTTCCTGTTGCAGGATCTTATGGGGAG
GTCTATCGTGGAGAGTGGCATGGAACTGTAAGTTTTTCTATAGATCTCTTCTTTTCATTTTAGG
TTTTGCTGTAATGAACTTTTGCATCTTTTTTCTTTACAAAGTTGAAAGCTAGAACATACTGTAT
TATCTGAGTATCAGATGCAAGTTGTTTCTTCAACTTAGAGAGTAATAATATGTATGGGCATCTG
AAATCTGTGGATGTTGTTAGTGTGTGAAGTGAAGTTGTTGAAGACTGCCAAGTTTCATTTATAC
TTGTGTATTCTTGTAGTTTGAAGAGTCTCCAAGGGGATTTATATGGCCTTTGGGGAATGGCAAA
TTGTGGAAGAGTTAATAGTACTCCACCTATTGACTTGAGGTTTTGGGTTGGATCCTCATATTCT
TGGATAAACCTATTCTCTCACATGTGAGGTGGGAAGGGTGTTGGAGATATGCAATTTCTTATAC
CAGGTATTGAAGGACTTTCAAAGACCTTTATAAACCCTCATATCCGATGTGGAATTTAGGATAC
ATGGGACATGCGTGTCTGCTTTAAGAAACTGTGTTCACTATGAACTAGATTTTGTTTTGCACAC
CATTATTGAAAGCTTATATATATATATAGATATATTTTATTTTATTTTTAAAAAAAAATTCTGG
ATGTTAATGCCTCTTGGGAAAGAGTGTCTGACTGGATTCATTGGCACTGTTTAGATATTGTGGG
TCAACAGGGATATAGCTGTGTTGTTCAGTCATTTTTCACTTGCATCAAATTTAAATTGGAAAAA
TCCGTTACTCTTACAAACATTTATCGTTGTCTTCAACTTGAACTGATACAAATTGATGGAACCT
TCTTATTTTCAGGAAGTAGCTGTGAAGAAATTCCTAGACCAAGAATTAACTGGTGAATCACTTG
AAGAGTTTAAAAGTGAGGTATACCCTTTCTTGTCCAACATAGGCCTTTTCCCTTGGTTTTTCAG
GGAAATTTTGAAAATTACAATTCATGGCATTACTATCATATCTTGGATGTCTTTCTAAATCATC
AATGAATTTTCTTTTTTTAAAATATATTGAAAAACCTTTTCAAAAGAATTTGAAAAGCTAATGA
ATAAATGCCAAAGGAAAAAAATCCAGAATAAGAACATTAAAATGGGGATACATGCCCTAGTACC
ACTGATACAAGAATAAAAAATCTAGCTTAATACATGCCCTAGTCACTAACTCGGTATAAGCCAG
GAAGAATACTGGCAGAAAGTAATGCTTGCTTGTAAGGTACAATTACAACTGATGGGATAAGGGA
AGGATAGCCTAGTGGTAGAGACCCTTTACCTCCAATCGTTAGGTTGGTGGTTCAAGCCACCAAT
GGAGAAAAGTTGGAGAGGGCCACTGCTGGGCTCCTAGAAGGTCTTTTTGTTTTGATGAATTTTA
CCATATCAAAAGAAAGAATTGTGTAATTACATCTTAAATTTTTTTGTGTAGAAGGTCCTTCTAA
TAGTTCCTCTATGCTCTTCTTAATTTGTAACTCTTGGTAAGAAGCACACAGCATGTTAACTGAC
ATGCTGATGCAGTCTTTTCTTTAAACTGTTCCTCTCTATCATCCAAGTTAGTAAAAGTTTTCTC
CACTGAGTTCAGCCCTTTGATGTTTGATCAATTTGCCCAATTAAAACTGTAAATGATGCAGAGC
CTTAAATTTTGTTGCTGATCTATTTTGTGCACTTATCCATTTGTAGTCTGTTTGTTACACTAAG
AAAGTCAGTAGTCACTGCTCTTATCTGATGTGTTATTTAAAGGAATATTGTAATCTCATTCAGA
CTTAATTTTTCCTTGGAAGGTGATGATCATGAAAAGACTCCGGCATCCTAATGTAGTCCTGTTC
ATGGGAGCTGTTACACGTCCTCCAAACCTTTCAATTGTTACTGAGTTTCTTCATAGGTACATCA
AAATTCTGTAATATTTAGTTTTGCGGTAGTTCTGGTCCTCCAGGAAATTTAAAGTTGCCAAGTA
GCTGTTTCCAAGCTTGGAAGTATAAAGTGTTTGCAGCTTTGATGTATAACCGTTCAAATGCTGG
AAATCAAATTATATTTTGTTTTGCAGAGGTAGTTTATACAGATTAATTCATCGGTCGAACAATC
AATTAGATGAACGGAGACGTTTGAGGATGGCTCTTGATGCTGTATGCTCCACTTCTCTTCTTCT
TCTTTTTAATTTTTCCATTGATTCAAACCTTCTACATTACATAATGACTTTCTGCTATACGTAA
TTTATTTAACGAACAGGCTCGAGGAATGAACTATCTACACAATTGCACTCCTGTGATAGTTCAT
CGTGATTTGAAGTCTCCTAATCTCCTTGTGGATAAGAACTGGGTTGTGAAGGTGGAATTCCTTT
GACTGAAACCTAGTGAATGACATCTTACAATACCTTCCCATTTAACACAACTATTTGTGACTCT
AGGTATGTGATTTTGGGTTATCGAAAATAAAGCACAGCACCTTCCTATCTTCAAGATCAACTGC
TGGGACG
						
					

			
		

Sequences
Splice junction sequence	TCCCATTTAACACAACTATTTGTGACTCTAGGTATGTGATTTTGGGTTATCGAAAATAAAGCAC AGCACCTTCCTATCTTCAAGATCAACTGCTGGGACGgttttggctgatagtgtggggctcccgt gtcgattagtaaaagggcaagaatacacaggttcatatgaagttgcaatgaactatgtaaagct tgaagatg
Assembled circRNA sequence	NA The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	NA
Genomic sequence	GTTTTGGCTGATAGTGTGGGGCTCCCGTGTCGATTAGTAAAAGGGCAAGAATACACAGGTTCAT ATGAAGTTGCAATGAACTATGTAAAGCTTGAAGATGGAAGGTTCCTTCTCTCTAGTGTTCTTCC TTATTCAGATTTTCTAATTTCATTTCCGATTCCTATGTGTTTGTACCATAGTTTGTATATAGTC AGGTAGCATTTCGATGAGCAAGGTATATGTTAAGTTTTCAAGGCAGAGTGCTGGATAAATCTTC TTTGTTATTAAATACATATTTTTTGACAAGTCAAATACATAAACTTATCTTTAAGGTAGTAAGG TGATCATTTGAAACATATAATCTGTTTCTCTTATTTCTTAAGATTGTTGCAGTTTTTATTTGCT GGGAGTATAAATTTGAATTCACCTTGGTGGAAAAGTTTGTTCAGGCATATAATTACTCCTCCCA AGGTTGCCTCTTTGCTTACGAAGTCATACGCTTTGCAGGGAATATATTGTTGATTTGATGGCCG ACCCTGGCACACTTATTCCCTCTGATACATCTGGAACACAGGGAGACTATGAGGAATCCATCCT CTCCATCAGTCCATCATCCAAAGATGTTGATTCTCATACGGGTTCTTCTAGTAGTGGGGTTGCC TGTTCTTCAGAAGATCATTCAGAGTATGGAACCGAAGAGAGGAAATCCAGGTTTGGGGAAATCA GTGCAGGAAATGAGTCTCCCTCTACAGGTAATTCAGAAAAGCAGAAAGGAAATAATAACTCTGA TGACTTCACAAAGCTTCGTACTGTGAAGGAGCAAGGGCCGGAAACTTCATCCAGGACTGTGTAT GCAAGATCTCCTTATTCACATACAAGATCTCCTTCCTGGACTGAAGGCATTAGTTCCCCAGCTG TACGGCGAATGAAAGCGAAGGATGTCTCACTGTACATGATTGATGCTGCTAAAGAAAATCCTCA GCTAGCTCAAAAACTACATGATGTCTTGCTTGAAAGTGGTGTTGTTGCACCCCCAAATTTGTTC ACTGAAGTCTATTCAGAGCAATTAGATTCCTCTCCTGTGGAGGGAAAATCCAGGCCAGAGGATA TGGAAAGTCAGGGAAGGGATGAGGTTGAGAAAATCAAGAGTCAAGTTGATCTAGATTGTAATAA TTTCTTGCCTCCTTTGGCTTATCATGCCCAGTCCAAGGTCAATCCCCGTGGGCCATTTGATCCT CATCTGGATGGTGGAGAAGTTAGTGGGCAGCATGTTTCCCCACACTCTGAGCTGGCTGCAGCGA AATTCACGAAAAACATGCCTGTTGCTGCAGCTGCAGCTGCTGCAGCAGCTGTGGTGGCGTCTTC AATGGTAGCTGCTGCAGCAAAGACCACATATGGTTCAAAAGCTGATCTCCCTGTTGCAGCTGCT GTGACAGCCACAGCTGCAGCAGTGGTAGCAACAACTGCTGCTGTCGCTAAGCAATATGAAAACT TGGAGACATCTGCTCTTTTACCAAATAGTCCTGCTTTCTTACTTAATTTAATGGACTCTAAAAG AGTTGATAAAGATGCAGATGGTGCTGTGCCTGAAAAACGGGGTAGTGGTGATCAAGTGCATGAG GCATTAGGAGTGAATTCTGAGGGTGAAAGAGTATCAGATAGATCAACCGGTAATGATAGTGTGA AATCTGATGTGACACTTGATGATGTCGCAGATTGTGAGATTCCAATGGAGGAGATCACCTTGGG TGAGCGTATCGGACTTGGTATTGACCTGCATTGTATATTTCTAATCATACAAGCATCCATGAAG CAGTTTAACTCCTTGTCATCTTACATTTTGACTTATCTTTCCTGTTGCAGGATCTTATGGGGAG GTCTATCGTGGAGAGTGGCATGGAACTGTAAGTTTTTCTATAGATCTCTTCTTTTCATTTTAGG TTTTGCTGTAATGAACTTTTGCATCTTTTTTCTTTACAAAGTTGAAAGCTAGAACATACTGTAT TATCTGAGTATCAGATGCAAGTTGTTTCTTCAACTTAGAGAGTAATAATATGTATGGGCATCTG AAATCTGTGGATGTTGTTAGTGTGTGAAGTGAAGTTGTTGAAGACTGCCAAGTTTCATTTATAC TTGTGTATTCTTGTAGTTTGAAGAGTCTCCAAGGGGATTTATATGGCCTTTGGGGAATGGCAAA TTGTGGAAGAGTTAATAGTACTCCACCTATTGACTTGAGGTTTTGGGTTGGATCCTCATATTCT TGGATAAACCTATTCTCTCACATGTGAGGTGGGAAGGGTGTTGGAGATATGCAATTTCTTATAC CAGGTATTGAAGGACTTTCAAAGACCTTTATAAACCCTCATATCCGATGTGGAATTTAGGATAC ATGGGACATGCGTGTCTGCTTTAAGAAACTGTGTTCACTATGAACTAGATTTTGTTTTGCACAC CATTATTGAAAGCTTATATATATATATAGATATATTTTATTTTATTTTTAAAAAAAAATTCTGG ATGTTAATGCCTCTTGGGAAAGAGTGTCTGACTGGATTCATTGGCACTGTTTAGATATTGTGGG TCAACAGGGATATAGCTGTGTTGTTCAGTCATTTTTCACTTGCATCAAATTTAAATTGGAAAAA TCCGTTACTCTTACAAACATTTATCGTTGTCTTCAACTTGAACTGATACAAATTGATGGAACCT TCTTATTTTCAGGAAGTAGCTGTGAAGAAATTCCTAGACCAAGAATTAACTGGTGAATCACTTG AAGAGTTTAAAAGTGAGGTATACCCTTTCTTGTCCAACATAGGCCTTTTCCCTTGGTTTTTCAG GGAAATTTTGAAAATTACAATTCATGGCATTACTATCATATCTTGGATGTCTTTCTAAATCATC AATGAATTTTCTTTTTTTAAAATATATTGAAAAACCTTTTCAAAAGAATTTGAAAAGCTAATGA ATAAATGCCAAAGGAAAAAAATCCAGAATAAGAACATTAAAATGGGGATACATGCCCTAGTACC ACTGATACAAGAATAAAAAATCTAGCTTAATACATGCCCTAGTCACTAACTCGGTATAAGCCAG GAAGAATACTGGCAGAAAGTAATGCTTGCTTGTAAGGTACAATTACAACTGATGGGATAAGGGA AGGATAGCCTAGTGGTAGAGACCCTTTACCTCCAATCGTTAGGTTGGTGGTTCAAGCCACCAAT GGAGAAAAGTTGGAGAGGGCCACTGCTGGGCTCCTAGAAGGTCTTTTTGTTTTGATGAATTTTA CCATATCAAAAGAAAGAATTGTGTAATTACATCTTAAATTTTTTTGTGTAGAAGGTCCTTCTAA TAGTTCCTCTATGCTCTTCTTAATTTGTAACTCTTGGTAAGAAGCACACAGCATGTTAACTGAC ATGCTGATGCAGTCTTTTCTTTAAACTGTTCCTCTCTATCATCCAAGTTAGTAAAAGTTTTCTC CACTGAGTTCAGCCCTTTGATGTTTGATCAATTTGCCCAATTAAAACTGTAAATGATGCAGAGC CTTAAATTTTGTTGCTGATCTATTTTGTGCACTTATCCATTTGTAGTCTGTTTGTTACACTAAG AAAGTCAGTAGTCACTGCTCTTATCTGATGTGTTATTTAAAGGAATATTGTAATCTCATTCAGA CTTAATTTTTCCTTGGAAGGTGATGATCATGAAAAGACTCCGGCATCCTAATGTAGTCCTGTTC ATGGGAGCTGTTACACGTCCTCCAAACCTTTCAATTGTTACTGAGTTTCTTCATAGGTACATCA AAATTCTGTAATATTTAGTTTTGCGGTAGTTCTGGTCCTCCAGGAAATTTAAAGTTGCCAAGTA GCTGTTTCCAAGCTTGGAAGTATAAAGTGTTTGCAGCTTTGATGTATAACCGTTCAAATGCTGG AAATCAAATTATATTTTGTTTTGCAGAGGTAGTTTATACAGATTAATTCATCGGTCGAACAATC AATTAGATGAACGGAGACGTTTGAGGATGGCTCTTGATGCTGTATGCTCCACTTCTCTTCTTCT TCTTTTTAATTTTTCCATTGATTCAAACCTTCTACATTACATAATGACTTTCTGCTATACGTAA TTTATTTAACGAACAGGCTCGAGGAATGAACTATCTACACAATTGCACTCCTGTGATAGTTCAT CGTGATTTGAAGTCTCCTAATCTCCTTGTGGATAAGAACTGGGTTGTGAAGGTGGAATTCCTTT GACTGAAACCTAGTGAATGACATCTTACAATACCTTCCCATTTAACACAACTATTTGTGACTCT AGGTATGTGATTTTGGGTTATCGAAAATAAAGCACAGCACCTTCCTATCTTCAAGATCAACTGC TGGGACG

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.144529625

Conservation Information
Conserved circRNAs	NA
PMCS	0.144529625

			
				
						 Functional Information
					

				
						Coding potential
						Y
					

						Potential coding position
						
							67839897-67844176(+)
67839886-67843999(-)
						
					

						Potential amino acid sequence
						
							MNYVKLEDGREYIVDLMADPGTLIPSDTSGTQGDYEESILSISPSSKDVDSHTGSSSSGVACSS
EDHSEYGTEERKSRFGEISAGNESPSTGNSEKQKGNNNSDDFTKLRTVKEQGPETSSRTVYARS
PYSHTRSPSWTEGISSPAVRRMKAKDVSLYMIDAAKENPQLAQKLHDVLLESGVVAPPNLFTEV
YSEQLDSSPVEGKSRPEDMESQGRDEVEKIKSQVDLDCNNFLPPLAYHAQSKVNPRGPFDPHLD
GGEVSGQHVSPHSELAAAKFTKNMPVAAAAAAAAAVVASSMVAAAAKTTYGSKADLPVAAAVTA
TAAAVVATTAAVAKQYENLETSALLPNSPAFLLNLMDSKRVDKDADGAVPEKRGSGDQVHEALG
VNSEGERVSDRSTGNDSVKSDVTLDDVADCEIPMEEITLGERIGLGSYGEVYRGEWHGTEVAVK
KFLDQELTGESLEEFKSEVMIMKRLRHPNVVLFMGAVTRPPNLSIVTEFLHRGSLYRLIHRSNN
QLDERRRLRMALDAARGMNYLHNCTPVIVHRDLKSPNLLVDKNWVVKVCDFGLSKIKHSTFLSS
RSTAGTVLADSVGLPCRLVKGQEYTGSYEVAMNYVKLEDGREYIVDLMADPGTLIPSDTSGTQG
DYEESILSISPSSKDVDSHTGSSSSGVACSSEDHSEYGTEERKSRFGEISAGNESPSTGNSEKQ
KGNNNSDDFTKLRTVKEQGPETSSRTVYARSPYSHTRSPSWTEGISSPAVRRMKAKDVSLYMID
AAKENPQLAQKLHDVLLESGVVAPPNLFTEVYSEQLDSSPVEGKSRPEDMESQGRDEVEKIKSQ
VDLDCNNFLPPLAYHAQSKVNPRGPFDPHLDGGEVSGQHVSPHSELAAAKFTKNMPVAAAAAAA
AAVVASSMVAAAAKTTYGSKADLPVAAAVTATAAAVVATTAAVAKQYENLETSALLPNSPAFLL
NLMDSKRVDKDADGAVPEKRGSGDQVHEALGVNSEGERVSDRSTGNDSVKSDVTLDDVADCEIP
MEEITLGERIGLGSYGEVYRGEWHGTEVAVKKFLDQELTGESLEEFKSEVMIMKRLRHPNVVLF
MGAVTRPPNLSIVTEFLHRGSLYRLIHRSNNQLDERRRLRMALDAARGMNYLHNCTPVIVHRDL
KSPNLLVDKNWVVKVCDFGLSKIKHSTFLSSRSTAGTVLADSVGLPCRLVKGQEYTGSYEVAMN
YVKLEDGREYIVDLMADPGTLIPSDTSGTQGDYEESILSISPSSKDVDSHTGSSSSGVACSSED
HSEYGTEERKSRFGEISAGNESPSTGNSEKQKGNNNSDDFTKLRTVKEQGPETSSRTVYARSPY
SHTRSPSWTEGISSPAVRRMKAKDVSLYMIDAAKENPQLAQKLHDVLLESGVVAPPNLFTEVYS
EQLDSSPVEGKSRPEDMESQGRDEVEKIKSQVDLDCNNFLPPLAYHAQSKVNPRGPFDPHLDGG
EVSGQHVSPHSELAAAKFTKNMPVAAAAAAAAAVVASSMVAAAAKTTYGSKADLPVAAAVTATA
AAVVATTAAVAKQYENLETSALLPNSPAFLLNLMDSKRVDKDADGAVPEKRGSGDQVHEALGVN
SEGERVSDRSTGNDSVKSDVTLDDVADCEIPMEEITLGERIGLGSYGEVYRGEWHGTEVAVKKF
LDQELTGESLEEFKSEVMIMKRLRHPNVVLFMGAVTRPPNLSIVTEFLHRGSLYRLIHRSNNQL
DERRRLRMALDAARGMNYLHNCTPVIVHRDLKSPNLLVDKNWVVKVCDFGLSKIKHSTFLSSRS
TAGTVLADSVGLPCRLVKGQEYTGSYEVAMNYVKLEDGREYIVDLMADPGTLIPSDTSGTQGDY
EESILSISPSSKDVDSHTGSSSSGVACSSEDHSEYGTEERKSRFGEISAGNESPSTGNSEKQKG
NNNSDDFTKLRTVKEQGPETSSRTVYARSPYSHTRSPSWTEGISSPAVRRMKAKDVSLYMIDAA
KENPQLAQKLHDVLLESGVVAPPNLFTEVYSEQLDSSPVEGKSRPEDMESQGRDEVEKIKSQVD
LDCNNFLPPLAYHAQSKVNPRGPFDPHLDGGEVSGQHVSPHSELAAAKFTKNMPVAAAAAAAAA
VVASSMVAAAAKTTYGSKADLPVAAAVTATAAAVVATTAAVAKQYENLETSALLPNSPAFLLNL
MDSKRVDKDADGAVPEKRGSGDQVHEALGVNSEGERVSDRSTGNDSVKSDVTLDDVADCEIPME
EITLGERIGLGSYGEVYRGEWHGTEVAVKKFLDQELTGESLEEFKSEVMIMKRLRHPNVVLFMG
AVTRPPNLSIVTEFLHRGSLYRLIHRSNNQLDERRRLRMALDAARGMNYLHNCTPVIVHRDLKS
PNLLVDKNWVVKVCDFGLSKIKHSTFLSSRSTAGT(+)
MNLCILALLLIDTGAPHYQPKPSQQLILKIGRCCALFSITQNHIPSQPSSYPQGD*(-)
						
					

						Sponge-miRNAs
						
							NA						
					

						circRNA-miRNA-mRNA network
						 VISUALIZATION
					

						Potential function description
						NA
					

			
		

Functional Information
Coding potential	Y
Potential coding position	67839897-67844176(+) 67839886-67843999(-)
Potential amino acid sequence	MNYVKLEDGREYIVDLMADPGTLIPSDTSGTQGDYEESILSISPSSKDVDSHTGSSSSGVACSS EDHSEYGTEERKSRFGEISAGNESPSTGNSEKQKGNNNSDDFTKLRTVKEQGPETSSRTVYARS PYSHTRSPSWTEGISSPAVRRMKAKDVSLYMIDAAKENPQLAQKLHDVLLESGVVAPPNLFTEV YSEQLDSSPVEGKSRPEDMESQGRDEVEKIKSQVDLDCNNFLPPLAYHAQSKVNPRGPFDPHLD GGEVSGQHVSPHSELAAAKFTKNMPVAAAAAAAAAVVASSMVAAAAKTTYGSKADLPVAAAVTA TAAAVVATTAAVAKQYENLETSALLPNSPAFLLNLMDSKRVDKDADGAVPEKRGSGDQVHEALG VNSEGERVSDRSTGNDSVKSDVTLDDVADCEIPMEEITLGERIGLGSYGEVYRGEWHGTEVAVK KFLDQELTGESLEEFKSEVMIMKRLRHPNVVLFMGAVTRPPNLSIVTEFLHRGSLYRLIHRSNN QLDERRRLRMALDAARGMNYLHNCTPVIVHRDLKSPNLLVDKNWVVKVCDFGLSKIKHSTFLSS RSTAGTVLADSVGLPCRLVKGQEYTGSYEVAMNYVKLEDGREYIVDLMADPGTLIPSDTSGTQG DYEESILSISPSSKDVDSHTGSSSSGVACSSEDHSEYGTEERKSRFGEISAGNESPSTGNSEKQ KGNNNSDDFTKLRTVKEQGPETSSRTVYARSPYSHTRSPSWTEGISSPAVRRMKAKDVSLYMID AAKENPQLAQKLHDVLLESGVVAPPNLFTEVYSEQLDSSPVEGKSRPEDMESQGRDEVEKIKSQ VDLDCNNFLPPLAYHAQSKVNPRGPFDPHLDGGEVSGQHVSPHSELAAAKFTKNMPVAAAAAAA AAVVASSMVAAAAKTTYGSKADLPVAAAVTATAAAVVATTAAVAKQYENLETSALLPNSPAFLL NLMDSKRVDKDADGAVPEKRGSGDQVHEALGVNSEGERVSDRSTGNDSVKSDVTLDDVADCEIP MEEITLGERIGLGSYGEVYRGEWHGTEVAVKKFLDQELTGESLEEFKSEVMIMKRLRHPNVVLF MGAVTRPPNLSIVTEFLHRGSLYRLIHRSNNQLDERRRLRMALDAARGMNYLHNCTPVIVHRDL KSPNLLVDKNWVVKVCDFGLSKIKHSTFLSSRSTAGTVLADSVGLPCRLVKGQEYTGSYEVAMN YVKLEDGREYIVDLMADPGTLIPSDTSGTQGDYEESILSISPSSKDVDSHTGSSSSGVACSSED HSEYGTEERKSRFGEISAGNESPSTGNSEKQKGNNNSDDFTKLRTVKEQGPETSSRTVYARSPY SHTRSPSWTEGISSPAVRRMKAKDVSLYMIDAAKENPQLAQKLHDVLLESGVVAPPNLFTEVYS EQLDSSPVEGKSRPEDMESQGRDEVEKIKSQVDLDCNNFLPPLAYHAQSKVNPRGPFDPHLDGG EVSGQHVSPHSELAAAKFTKNMPVAAAAAAAAAVVASSMVAAAAKTTYGSKADLPVAAAVTATA AAVVATTAAVAKQYENLETSALLPNSPAFLLNLMDSKRVDKDADGAVPEKRGSGDQVHEALGVN SEGERVSDRSTGNDSVKSDVTLDDVADCEIPMEEITLGERIGLGSYGEVYRGEWHGTEVAVKKF LDQELTGESLEEFKSEVMIMKRLRHPNVVLFMGAVTRPPNLSIVTEFLHRGSLYRLIHRSNNQL DERRRLRMALDAARGMNYLHNCTPVIVHRDLKSPNLLVDKNWVVKVCDFGLSKIKHSTFLSSRS TAGTVLADSVGLPCRLVKGQEYTGSYEVAMNYVKLEDGREYIVDLMADPGTLIPSDTSGTQGDY EESILSISPSSKDVDSHTGSSSSGVACSSEDHSEYGTEERKSRFGEISAGNESPSTGNSEKQKG NNNSDDFTKLRTVKEQGPETSSRTVYARSPYSHTRSPSWTEGISSPAVRRMKAKDVSLYMIDAA KENPQLAQKLHDVLLESGVVAPPNLFTEVYSEQLDSSPVEGKSRPEDMESQGRDEVEKIKSQVD LDCNNFLPPLAYHAQSKVNPRGPFDPHLDGGEVSGQHVSPHSELAAAKFTKNMPVAAAAAAAAA VVASSMVAAAAKTTYGSKADLPVAAAVTATAAAVVATTAAVAKQYENLETSALLPNSPAFLLNL MDSKRVDKDADGAVPEKRGSGDQVHEALGVNSEGERVSDRSTGNDSVKSDVTLDDVADCEIPME EITLGERIGLGSYGEVYRGEWHGTEVAVKKFLDQELTGESLEEFKSEVMIMKRLRHPNVVLFMG AVTRPPNLSIVTEFLHRGSLYRLIHRSNNQLDERRRLRMALDAARGMNYLHNCTPVIVHRDLKS PNLLVDKNWVVKVCDFGLSKIKHSTFLSSRSTAGT(+) MNLCILALLLIDTGAPHYQPKPSQQLILKIGRCCALFSITQNHIPSQPSSYPQGD*(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Zuo et al., 2016

circRNA

Detail information of Solyc03g119140.2_circ_g.1

Address

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