Plant Circular RNA Database

Detail information of Os03g0295700_circ_g.4

			
						 General Information
					
						CircRNA Name
						Os03g0295700_circ_g.4
					
						ID in PlantcircBase
						osa_circ_019346
					
						Alias
						Os03circ12109/Os_ciR1254
					
						Organism
						
							Oryza sativa						
					
						Position
						
							chr3: 10346831-10351011  JBrowse»						
					
						Reference genome
						
							IRGSP-1.0.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						CIRCexplorer, SMALT, Segemehl, find_circ
					
						Parent gene
						
							Os03g0295700						
					
						Parent gene annotation
						
							Conserved hypothetical protein. (Os03t0295700-01)
							
						Parent gene strand
						+
					
						Alternative splicing
						
							Os03g0295700_circ_g.5 Os03g0295700_circ_g.6 Os03g0295700_circ_g.7 Os03g0295700_circ_g.8 Os03g0295700_circ_g.9 Os03g0295700_circ_g.10 						
					
						Support reads
						5/13/1
					
						Tissues
						leaf and panicle/root/shoot, root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Os03t0295700-01:8

General Information
CircRNA Name	Os03g0295700_circ_g.4
ID in PlantcircBase	osa_circ_019346
Alias	Os03circ12109/Os_ciR1254
Organism	Oryza sativa
Position	chr3: 10346831-10351011 JBrowse»
Reference genome	IRGSP-1.0.38
Type	e-circRNA
Identification method	CIRCexplorer, SMALT, Segemehl, find_circ
Parent gene	Os03g0295700
Parent gene annotation	Conserved hypothetical protein. (Os03t0295700-01)
Parent gene strand	+
Alternative splicing	Os03g0295700_circ_g.5 Os03g0295700_circ_g.6 Os03g0295700_circ_g.7 Os03g0295700_circ_g.8 Os03g0295700_circ_g.9 Os03g0295700_circ_g.10
Support reads	5/13/1
Tissues	leaf and panicle/root/shoot, root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Os03t0295700-01:8

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							AATTCGTTGGTGCTGGGAGGAATCAGAGCGATTGCCGAGGATGAAGAGCACTTCTAGTATCGAC
CTCTGTACTTGTCTGATACACCAAAAGTTGCATATGattattgctcccttgagtgccagtggtg
tggtgcttgatgatcctgaatcaactaagcttttgagttcagtagcaattgctctgtctaattg
tggaaggt

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 1080
Transcript exons: 10346831-10346928,10347457-10347628,10348339-10348555,10
349455-10349581,10349717-10349826,10349915-10350007,1035
0662-10350790,10350878-10351011
ATTATTGCTCCCTTGAGTGCCAGTGGTGTGGTGCTTGATGATCCTGAATCAACTAAGCTTTTGA
GTTCAGTAGCAATTGCTCTGTCTAATTGTGGAAGCAATTGGCCAGCCTTTGTACCAGTGCATGA
CCCTTCACGTAAAGCATATATAGGAATCCAAAATTTGGGAACTGTATTTACTCGAAGATTTGAA
GCTGATCGTATTGGTAGCCAGGTTCCGATACGACTCATGCATCTGGAGGGGTTACACGAGCTGT
TTCTATCAAAATTTGTCCTATCCTCTACAGATTTTCCTGCAAGGGTAAAGGTAATCTTCTCCAT
GAAGCTTACCTACAGGACTCCTGAATATGATTACTATAACGAGGAAACTTTGGTGTCCGAAGCT
AACGAGTCAATAGCAGAAAGCGAAGTTGCAAACCACCCAAAAAAACAATGGGATGATGATTGCT
CTTGGGCAGAGTGGTATTCTGCTGAGGATCCAGTCAAAGGTTTTGAGTTGACTGCCATTTGGGG
AGAGAGAGTGTTTGAAGAGACCCTTGAGATGGCTGAGGTGGAAAATGCTTCGTCATTTGATGCT
GATCGTTGGCTTCTTCACCCAATTGTATCTCCATACATGGTTGATGATTCTATTGGAAAGTTTG
TGGGGTTTGCATCGCAGCTGCAACTTCTGGTAAAAGCATTTGAATCATCAGCAGAGGCACAGTT
TTTGGAAGATTTTGTTGCAGCAGATACTTCAGGCCAGGAAAATTCAAAATCTACCGTCACTGTA
CCTCCACCATCTGTTGTTGATCGTGTTATGAAAGATCTTTTCAATGATGAGGTTGGGAACTCGA
ATTATGTGGAAGCAGAAAATAAGTATGGCCGCGCTATGAAAGGAGCACCTTCAGATTCACTCTT
TGCCCAATTCTGTTTGCATGCTCTGTGGTTCGGCAACTGCCATATACGAGCAATAGCAGTCCTG
TGGATTGACTTTGTTCGTGAAATTCGTTGGTGCTGGGAGGAATCAGAGCGATTGCCGAGGATGA
AGAGCACTTCTAGTATCGACCTCTGTACTTGTCTGATACACCAAAAGTTGCATATG
						
					

						Genomic sequence
						
							ATTATTGCTCCCTTGAGTGCCAGTGGTGTGGTGCTTGATGATCCTGAATCAACTAAGCTTTTGA
GTTCAGTAGCAATTGCTCTGTCTAATTGTGGAAGGTAAGTTTTGACTAACATATAAATTTATAA
CAGTGAGCAGTTTGTTGAACTAGACATATTACAGATTGTGCATATTGTTCAGCAAGTTAGATAG
TATAAGTTCATCAACGATCACAGTATTTCTGTTCGCGTCTTCACGAAGCAATTGATTAGATATC
ATTTTGTGTTGTCAATGCTAGTCCTCTCTGGTACACCCATATTCAATCTGAAATGTCCCTTTCA
AATCTCTTTGCACTTCATAACTCATTCTGGCATAAATGTTTGTTCTGAATCTGGGACTGGGAGA
TTCAGTCCTGCACAATATGGTTGCACTAAGCATATTATTATATGATATTGGTGTATTTAGTCTT
CTTCAAGGAATAAGAAAATTCTGTCTATACGAGGGAATATTAATTCACACGCGTTGCATTTTTA
CATCTCATCAAGGCACGCTGCATGAATCTTAGTTAACAGTTAACAGGCCATTTCTTTATTTTCT
AGTGAAACTATACCATTGTTTAATTTTACTGACATGAATTTTAATCTTAGCAATTGGCCAGCCT
TTGTACCAGTGCATGACCCTTCACGTAAAGCATATATAGGAATCCAAAATTTGGGAACTGTATT
TACTCGAAGATTTGAAGCTGATCGTATTGGTAGCCAGGTTCCGATACGACTCATGCATCTGGAG
GGGTTACACGAGCTGTTTCTATCAAAATTTGTGAGTATTTTCTTATAACTTTTGGTGCTGTTTC
TTCTCCCATAGAACTTTTTAAGACAGCAGATAAAATCTGTGTACAATGAATGGTTAATTACCTA
TGTTTCAATATATTCTGCTTATAGCTTTTATAATCTAGTTTGAAAATGTAAGATGTGCATGGAA
TTTAGTTACCTATTCTCCCATTAACCCTCATTTACCATCCCCTCTTATCCCCTACATTAGTACT
GGGACATGAGTCATTTCCTTTACCACTTTCTTGTTCTATAACCTCCTTAATCCGCAGGCATAGT
TAAAATACTCCTTGTTAATCAAATGGAAGGAATATCGTGGAAACAAACTTTATTTACATTTGCT
ACCACATTATCTTTTGAACCTCACAATTGAGATACATAGTGTTTGAACTTCAAACTGGATCGTG
CACTAGATCTTTTGAAATCTGAAAGGTTTGCCTCATTTTTAATCAGCAGAAGTATTCAACCTTT
TCAAAGAAAAAATATCTGCATATGATGGACATACAAAAAAAGTAGAGAGGGGGGGGGGGGGGGC
AGCTACCCGCCATTCAACAATCAGTCCATTACATTTGAACTATAGGAATGTACCATCTGTTTTT
ATTCAGCAATTCTGTTGTTCTGACTCTTCAGAGCCGCACTACTGATTTGGATTATTTTGCTACT
TTGTTACATATGTGACCTGTATTTTTCTGTTTGGAGGTCCTATCCTCTACAGATTTTCCTGCAA
GGGTAAAGGTAATCTTCTCCATGAAGCTTACCTACAGGACTCCTGAATATGATTACTATAACGA
GGAAACTTTGGTGTCCGAAGCTAACGAGTCAATAGCAGAAAGCGAAGTTGCAAACCACCCAAAA
AAACAATGGGATGATGATTGCTCTTGGGCAGAGTGGTATTCTGCTGAGGATCCAGTCAAAGGTA
ACTGCAACCTTATTCCATATTTCTAGTAGCAACTTTTCTACTCGCTTATTTTTTGAATAACGGG
TTTTGACAAAAAAAAAGGATTAAAATGGTCTTCAACAATATTTCTAGCACAAAGAATGAGGTAA
TGAAGTTGTGGGGAAATGTAGAGTTAACAGGGGAAATTTTTTGAAAACAGGCATTGTGAATTGT
GATGCCAAGTGTTTGTGTGATATGATATTGTTCAAAAGCAACAACTGCTAAAAATTTGAAGGAG
TAATAATTACTCCCAAAAATAAGACAAATGAAAAAATAGCAACTTAGACATAGATTTGATCTAA
TTGGATCAATCGTCAAGAGCAACCAAGAACCAATAGTTTCAAAATTGCGAACAATGCCACTTAA
TGGTATCGAAAATTGATCTAGCAGCTTATATTATAATTCTTGTATTACCATTAAAGGATAGTTT
CTATTATATGTGCCTCTCTTTTATCTGTCATCAGTTTCTCTGTATGGTTCTAAACTTCTTATGC
ATATTATTGTCATTGATACTGGGACTTTACTTTGTTTTTTTACATTGTAAGTGCGAAGGGATCA
TGTTGTCATCTCAACGTAGAAACCTCATTTTCCATGTCAGAGGAAATATGGAGGCTGAATAATT
CTTCTTCACATTTTCCTTTATGCTAGTGGTATCCTAACAAGTGTTGATATGATATGAGAGGCTT
GGTTTGCCATGAAGGCAAGGACTATTACAGTATATTAACTCCATTTTTTAAGCAGTAGTTGTCA
TGTTTGGAAGCGTGTTTTACCTCATGTATTTAGTATTTATAATATGTGTGACTCATATTTTTCC
AGCTGAGATTTTTTTAATTAACATATGTTAAAAAACAATAGACTTAGTGGCTAAATTGTTTTAG
GTTTTGAGTTGACTGCCATTTGGGGAGAGAGAGTGTTTGAAGAGACCCTTGAGATGGCTGAGGT
GGAAAATGCTTCGTCATTTGATGCTGATCGTTGGCTTCTTCACCCAATTGTATCTCCATACATG
TAAATTCCTTGTGACATTATTACCTTCACACTTTTTACATCAATTGTACGTAAACCTGCTGTAT
GTATTCTCTCTTTTTTTTTTACCTTCACTGGATGTATTCTTTTTTTATCTATGTCTGTACTTTG
CACCAGGGTTGATGATTCTATTGGAAAGTTTGTGGGGTTTGCATCGCAGCTGCAACTTCTGGTA
AAAGCATTTGAATCATCAGCAGAGGCACAGTTTTTGGAAGATTTTGTTGCAGGTTAAGAGCTTC
GTGCATGCCTGAAATCCTTCAAAGCACTATTTATTCAGCTTTTTTTTTTCTGATTTTTATCTGT
CATGTTAGACAGCAGATACTTCAGGCCAGGAAAATTCAAAATCTACCGTCACTGTACCTCCACC
ATCTGTTGTTGATCGTGTTATGAAAGATCTTTTCAATGATGGTATTTATCCATTCACCTATCTC
ATTAACAAATTCAGTTAATGAATCATCATACAGTGACCATAATTGACAAGTTTCTTGTGAAACC
TAATGTATTATCCATAATGCTGCACTGGAGCACTTAAGTAATTAGGCTAGCTCATCTTTTTACA
TCTTATTTCAGAAGTTCTCAAATGTCATCAGTTACATTTGCATAGATGTACTTTACTGAAGGAA
CAGGGTCATATTCCTTGTTTAGTAAGTGGATAGATCAGTTGGTCTGAGCCTGACAATGGTCTTC
TAGCTTCCATGGAATATCCATCACTGCCTGAACTCACTCTTGGGATGGTCAGGGTTCAACAGGG
GCAGGGGTATGCTTGTGCAGTGTTGTACCCCGTGTCTAGTTCTATGTTTTGTTTGTAGTCTTGC
ATGCTTGAACCAGACTGTCACCCAGTTATACTGCTATGGCTTCAATTATTATTTCCTAGTTTCT
CTACACCAGTGGTATCTTTTTCGGGTTGTAGATAAAGTGAAAAATGACCTTACCGAGAAACAGA
TACATAATATTTGCTTATAACATTAACGCCATTGTGAATTTTCATTTCATTTCAGTGCCTTCTT
TCTTTACAATTCATTTTGATAAAGTTGACAAACTCTTATGTTTTCTGTTTGACAGAGGTTGGGA
ACTCGAATTATGTGGAAGCAGAAAATAAGTATGGCCGCGCTATGAAAGGAGCACCTTCAGATTC
ACTCTTTGCCCAATTCTGTTTGCATGCTCTGTGGTTCGGCAACTGCCATATACGAGGTATGTGT
TTTCCCCTTTGCTTTCTTATAATGCCTCTGTTTTAATTTGATGAGCATTAATAATAATAGGACT
TATTTTTTATTTCAGCAATAGCAGTCCTGTGGATTGACTTTGTTCGTGAAATTCGTTGGTGCTG
GGAGGAATCAGAGCGATTGCCGAGGATGAAGAGCACTTCTAGTATCGACCTCTGTACTTGTCTG
ATACACCAAAAGTTGCATATG
						
					

			
		

Sequences
Splice junction sequence	AATTCGTTGGTGCTGGGAGGAATCAGAGCGATTGCCGAGGATGAAGAGCACTTCTAGTATCGAC CTCTGTACTTGTCTGATACACCAAAAGTTGCATATGattattgctcccttgagtgccagtggtg tggtgcttgatgatcctgaatcaactaagcttttgagttcagtagcaattgctctgtctaattg tggaaggt
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 1080 Transcript exons: 10346831-10346928,10347457-10347628,10348339-10348555,10 349455-10349581,10349717-10349826,10349915-10350007,1035 0662-10350790,10350878-10351011 ATTATTGCTCCCTTGAGTGCCAGTGGTGTGGTGCTTGATGATCCTGAATCAACTAAGCTTTTGA GTTCAGTAGCAATTGCTCTGTCTAATTGTGGAAGCAATTGGCCAGCCTTTGTACCAGTGCATGA CCCTTCACGTAAAGCATATATAGGAATCCAAAATTTGGGAACTGTATTTACTCGAAGATTTGAA GCTGATCGTATTGGTAGCCAGGTTCCGATACGACTCATGCATCTGGAGGGGTTACACGAGCTGT TTCTATCAAAATTTGTCCTATCCTCTACAGATTTTCCTGCAAGGGTAAAGGTAATCTTCTCCAT GAAGCTTACCTACAGGACTCCTGAATATGATTACTATAACGAGGAAACTTTGGTGTCCGAAGCT AACGAGTCAATAGCAGAAAGCGAAGTTGCAAACCACCCAAAAAAACAATGGGATGATGATTGCT CTTGGGCAGAGTGGTATTCTGCTGAGGATCCAGTCAAAGGTTTTGAGTTGACTGCCATTTGGGG AGAGAGAGTGTTTGAAGAGACCCTTGAGATGGCTGAGGTGGAAAATGCTTCGTCATTTGATGCT GATCGTTGGCTTCTTCACCCAATTGTATCTCCATACATGGTTGATGATTCTATTGGAAAGTTTG TGGGGTTTGCATCGCAGCTGCAACTTCTGGTAAAAGCATTTGAATCATCAGCAGAGGCACAGTT TTTGGAAGATTTTGTTGCAGCAGATACTTCAGGCCAGGAAAATTCAAAATCTACCGTCACTGTA CCTCCACCATCTGTTGTTGATCGTGTTATGAAAGATCTTTTCAATGATGAGGTTGGGAACTCGA ATTATGTGGAAGCAGAAAATAAGTATGGCCGCGCTATGAAAGGAGCACCTTCAGATTCACTCTT TGCCCAATTCTGTTTGCATGCTCTGTGGTTCGGCAACTGCCATATACGAGCAATAGCAGTCCTG TGGATTGACTTTGTTCGTGAAATTCGTTGGTGCTGGGAGGAATCAGAGCGATTGCCGAGGATGA AGAGCACTTCTAGTATCGACCTCTGTACTTGTCTGATACACCAAAAGTTGCATATG
Genomic sequence	ATTATTGCTCCCTTGAGTGCCAGTGGTGTGGTGCTTGATGATCCTGAATCAACTAAGCTTTTGA GTTCAGTAGCAATTGCTCTGTCTAATTGTGGAAGGTAAGTTTTGACTAACATATAAATTTATAA CAGTGAGCAGTTTGTTGAACTAGACATATTACAGATTGTGCATATTGTTCAGCAAGTTAGATAG TATAAGTTCATCAACGATCACAGTATTTCTGTTCGCGTCTTCACGAAGCAATTGATTAGATATC ATTTTGTGTTGTCAATGCTAGTCCTCTCTGGTACACCCATATTCAATCTGAAATGTCCCTTTCA AATCTCTTTGCACTTCATAACTCATTCTGGCATAAATGTTTGTTCTGAATCTGGGACTGGGAGA TTCAGTCCTGCACAATATGGTTGCACTAAGCATATTATTATATGATATTGGTGTATTTAGTCTT CTTCAAGGAATAAGAAAATTCTGTCTATACGAGGGAATATTAATTCACACGCGTTGCATTTTTA CATCTCATCAAGGCACGCTGCATGAATCTTAGTTAACAGTTAACAGGCCATTTCTTTATTTTCT AGTGAAACTATACCATTGTTTAATTTTACTGACATGAATTTTAATCTTAGCAATTGGCCAGCCT TTGTACCAGTGCATGACCCTTCACGTAAAGCATATATAGGAATCCAAAATTTGGGAACTGTATT TACTCGAAGATTTGAAGCTGATCGTATTGGTAGCCAGGTTCCGATACGACTCATGCATCTGGAG GGGTTACACGAGCTGTTTCTATCAAAATTTGTGAGTATTTTCTTATAACTTTTGGTGCTGTTTC TTCTCCCATAGAACTTTTTAAGACAGCAGATAAAATCTGTGTACAATGAATGGTTAATTACCTA TGTTTCAATATATTCTGCTTATAGCTTTTATAATCTAGTTTGAAAATGTAAGATGTGCATGGAA TTTAGTTACCTATTCTCCCATTAACCCTCATTTACCATCCCCTCTTATCCCCTACATTAGTACT GGGACATGAGTCATTTCCTTTACCACTTTCTTGTTCTATAACCTCCTTAATCCGCAGGCATAGT TAAAATACTCCTTGTTAATCAAATGGAAGGAATATCGTGGAAACAAACTTTATTTACATTTGCT ACCACATTATCTTTTGAACCTCACAATTGAGATACATAGTGTTTGAACTTCAAACTGGATCGTG CACTAGATCTTTTGAAATCTGAAAGGTTTGCCTCATTTTTAATCAGCAGAAGTATTCAACCTTT TCAAAGAAAAAATATCTGCATATGATGGACATACAAAAAAAGTAGAGAGGGGGGGGGGGGGGGC AGCTACCCGCCATTCAACAATCAGTCCATTACATTTGAACTATAGGAATGTACCATCTGTTTTT ATTCAGCAATTCTGTTGTTCTGACTCTTCAGAGCCGCACTACTGATTTGGATTATTTTGCTACT TTGTTACATATGTGACCTGTATTTTTCTGTTTGGAGGTCCTATCCTCTACAGATTTTCCTGCAA GGGTAAAGGTAATCTTCTCCATGAAGCTTACCTACAGGACTCCTGAATATGATTACTATAACGA GGAAACTTTGGTGTCCGAAGCTAACGAGTCAATAGCAGAAAGCGAAGTTGCAAACCACCCAAAA AAACAATGGGATGATGATTGCTCTTGGGCAGAGTGGTATTCTGCTGAGGATCCAGTCAAAGGTA ACTGCAACCTTATTCCATATTTCTAGTAGCAACTTTTCTACTCGCTTATTTTTTGAATAACGGG TTTTGACAAAAAAAAAGGATTAAAATGGTCTTCAACAATATTTCTAGCACAAAGAATGAGGTAA TGAAGTTGTGGGGAAATGTAGAGTTAACAGGGGAAATTTTTTGAAAACAGGCATTGTGAATTGT GATGCCAAGTGTTTGTGTGATATGATATTGTTCAAAAGCAACAACTGCTAAAAATTTGAAGGAG TAATAATTACTCCCAAAAATAAGACAAATGAAAAAATAGCAACTTAGACATAGATTTGATCTAA TTGGATCAATCGTCAAGAGCAACCAAGAACCAATAGTTTCAAAATTGCGAACAATGCCACTTAA TGGTATCGAAAATTGATCTAGCAGCTTATATTATAATTCTTGTATTACCATTAAAGGATAGTTT CTATTATATGTGCCTCTCTTTTATCTGTCATCAGTTTCTCTGTATGGTTCTAAACTTCTTATGC ATATTATTGTCATTGATACTGGGACTTTACTTTGTTTTTTTACATTGTAAGTGCGAAGGGATCA TGTTGTCATCTCAACGTAGAAACCTCATTTTCCATGTCAGAGGAAATATGGAGGCTGAATAATT CTTCTTCACATTTTCCTTTATGCTAGTGGTATCCTAACAAGTGTTGATATGATATGAGAGGCTT GGTTTGCCATGAAGGCAAGGACTATTACAGTATATTAACTCCATTTTTTAAGCAGTAGTTGTCA TGTTTGGAAGCGTGTTTTACCTCATGTATTTAGTATTTATAATATGTGTGACTCATATTTTTCC AGCTGAGATTTTTTTAATTAACATATGTTAAAAAACAATAGACTTAGTGGCTAAATTGTTTTAG GTTTTGAGTTGACTGCCATTTGGGGAGAGAGAGTGTTTGAAGAGACCCTTGAGATGGCTGAGGT GGAAAATGCTTCGTCATTTGATGCTGATCGTTGGCTTCTTCACCCAATTGTATCTCCATACATG TAAATTCCTTGTGACATTATTACCTTCACACTTTTTACATCAATTGTACGTAAACCTGCTGTAT GTATTCTCTCTTTTTTTTTTACCTTCACTGGATGTATTCTTTTTTTATCTATGTCTGTACTTTG CACCAGGGTTGATGATTCTATTGGAAAGTTTGTGGGGTTTGCATCGCAGCTGCAACTTCTGGTA AAAGCATTTGAATCATCAGCAGAGGCACAGTTTTTGGAAGATTTTGTTGCAGGTTAAGAGCTTC GTGCATGCCTGAAATCCTTCAAAGCACTATTTATTCAGCTTTTTTTTTTCTGATTTTTATCTGT CATGTTAGACAGCAGATACTTCAGGCCAGGAAAATTCAAAATCTACCGTCACTGTACCTCCACC ATCTGTTGTTGATCGTGTTATGAAAGATCTTTTCAATGATGGTATTTATCCATTCACCTATCTC ATTAACAAATTCAGTTAATGAATCATCATACAGTGACCATAATTGACAAGTTTCTTGTGAAACC TAATGTATTATCCATAATGCTGCACTGGAGCACTTAAGTAATTAGGCTAGCTCATCTTTTTACA TCTTATTTCAGAAGTTCTCAAATGTCATCAGTTACATTTGCATAGATGTACTTTACTGAAGGAA CAGGGTCATATTCCTTGTTTAGTAAGTGGATAGATCAGTTGGTCTGAGCCTGACAATGGTCTTC TAGCTTCCATGGAATATCCATCACTGCCTGAACTCACTCTTGGGATGGTCAGGGTTCAACAGGG GCAGGGGTATGCTTGTGCAGTGTTGTACCCCGTGTCTAGTTCTATGTTTTGTTTGTAGTCTTGC ATGCTTGAACCAGACTGTCACCCAGTTATACTGCTATGGCTTCAATTATTATTTCCTAGTTTCT CTACACCAGTGGTATCTTTTTCGGGTTGTAGATAAAGTGAAAAATGACCTTACCGAGAAACAGA TACATAATATTTGCTTATAACATTAACGCCATTGTGAATTTTCATTTCATTTCAGTGCCTTCTT TCTTTACAATTCATTTTGATAAAGTTGACAAACTCTTATGTTTTCTGTTTGACAGAGGTTGGGA ACTCGAATTATGTGGAAGCAGAAAATAAGTATGGCCGCGCTATGAAAGGAGCACCTTCAGATTC ACTCTTTGCCCAATTCTGTTTGCATGCTCTGTGGTTCGGCAACTGCCATATACGAGGTATGTGT TTTCCCCTTTGCTTTCTTATAATGCCTCTGTTTTAATTTGATGAGCATTAATAATAATAGGACT TATTTTTTATTTCAGCAATAGCAGTCCTGTGGATTGACTTTGTTCGTGAAATTCGTTGGTGCTG GGAGGAATCAGAGCGATTGCCGAGGATGAAGAGCACTTCTAGTATCGACCTCTGTACTTGTCTG ATACACCAAAAGTTGCATATG

			
						 Conservation Information
					
						Conserved circRNAs
						
							osi_circ_004754* osi_circ_012875 						
					
						PMCS
						0.221325965

Conservation Information
Conserved circRNAs	osi_circ_004754* osi_circ_012875
PMCS	0.221325965

			
				
						 Functional Information
					

				
						Coding potential
						Y
					

						Potential coding position
						
							10347588-10351008(+)
10348390-10350680(-)
						
					

						Potential amino acid sequence
						
							MHLEGLHELFLSKFVLSSTDFPARVKVIFSMKLTYRTPEYDYYNEETLVSEANESIAESEVANH
PKKQWDDDCSWAEWYSAEDPVKGFELTAIWGERVFEETLEMAEVENASSFDADRWLLHPIVSPY
MVDDSIGKFVGFASQLQLLVKAFESSAEAQFLEDFVAADTSGQENSKSTVTVPPPSVVDRVMKD
LFNDEVGNSNYVEAENKYGRAMKGAPSDSLFAQFCLHALWFGNCHIRAIAVLWIDFVREIRWCW
EESERLPRMKSTSSIDLCTCLIHQKLHMIIAPLSASGVVLDDPESTKLLSSVAIALSNCGSNWP
AFVPVHDPSRKAYIGIQNLGTVFTRRFEADRIGSQVPIRLMHLEGLHELFLSKFVLSSTDFPAR
VKVIFSMKLTYRTPEYDYYNEETLVSEANESIAESEVANHPKKQWDDDCSWAEWYSAEDPVKGF
ELTAIWGERVFEETLEMAEVENASSFDADRWLLHPIVSPYMVDDSIGKFVGFASQLQLLVKAFE
SSAEAQFLEDFVAADTSGQENSKSTVTVPPPSVVDRVMKDLFNDEVGNSNYVEAENKYGRAMKG
APSDSLFAQFCLHALWFGNCHIRAIAVLWIDFVREIRWCWEESERLPRMKSTSSIDLCTCLIHQ
KLHMIIAPLSASGVVLDDPESTKLLSSVAIALSNCGSNWPAFVPVHDPSRKAYIGIQNLGTVFT
RRFEADRIGSQVPIRLMHLEGLHELFLSKFVLSSTDFPARVKVIFSMKLTYRTPEYDYYNEETL
VSEANESIAESEVANHPKKQWDDDCSWAEWYSAEDPVKGFELTAIWGERVFEETLEMAEVENAS
SFDADRWLLHPIVSPYMVDDSIGKFVGFASQLQLLVKAFESSAEAQFLEDFVAADTSGQENSKS
TVTVPPPSVVDRVMKDLFNDEVGNSNYVEAENKYGRAMKGAPSDSLFAQFCLHALWFGNCHIRA
IAVLWIDFVREIRWCWEESERLPRMKSTSSIDLCTCLIHQKLHMIIAPLSASGVVLDDPESTKL
LSSVAIALSNCGSNWPAFVPVHDPSRKAYIGIQNLGTVFTRRFEADRIGSQVPIRLMHLEGLHE
LFLSKFVLSSTDFPARVKVIFSMKLTYRTPEYDYYNEETLVSEANESIAESEVANHPKKQWDDD
CSWAEWYSAEDPVKGFELTAIWGERVFEETLEMAEVENASSFDADRWLLHPIVSPYMVDDSIGK
FVGFASQLQLLVKAFESSAEAQFLEDFVAADTSGQENSKSTVTVPPPSVVDRVMKDLFNDEVGN
SNYVEAENKYGRAMKGAPSDSLFAQFCLHALWFGNCHIRAIAVLWIDFVREIRWCWEESERLPR
MKSTSSIDLCTCLIHQKLHM(+)
MEKITFTLAGKSVEDRTNFDRNSSCNPSRCMSRIGTWLPIRSASNLRVNTVPKFWIPIYALREG
SCTGTKAGQLLPQLDRAIATELKSLVDSGSSSTTPLALKGAIIICNFWCIRQVQRSILEVLFIL
GNRSDSSQHQRISRTKSIHRTAIARIWQLPNHRACKQNWAKSESEGAPFIARPYLFSAST*(-)
						
					

						Sponge-miRNAs
						
							NA						
					

						circRNA-miRNA-mRNA network
						 VISUALIZATION
					

						Potential function description
						NA
					

			
		

Functional Information
Coding potential	Y
Potential coding position	10347588-10351008(+) 10348390-10350680(-)
Potential amino acid sequence	MHLEGLHELFLSKFVLSSTDFPARVKVIFSMKLTYRTPEYDYYNEETLVSEANESIAESEVANH PKKQWDDDCSWAEWYSAEDPVKGFELTAIWGERVFEETLEMAEVENASSFDADRWLLHPIVSPY MVDDSIGKFVGFASQLQLLVKAFESSAEAQFLEDFVAADTSGQENSKSTVTVPPPSVVDRVMKD LFNDEVGNSNYVEAENKYGRAMKGAPSDSLFAQFCLHALWFGNCHIRAIAVLWIDFVREIRWCW EESERLPRMKSTSSIDLCTCLIHQKLHMIIAPLSASGVVLDDPESTKLLSSVAIALSNCGSNWP AFVPVHDPSRKAYIGIQNLGTVFTRRFEADRIGSQVPIRLMHLEGLHELFLSKFVLSSTDFPAR VKVIFSMKLTYRTPEYDYYNEETLVSEANESIAESEVANHPKKQWDDDCSWAEWYSAEDPVKGF ELTAIWGERVFEETLEMAEVENASSFDADRWLLHPIVSPYMVDDSIGKFVGFASQLQLLVKAFE SSAEAQFLEDFVAADTSGQENSKSTVTVPPPSVVDRVMKDLFNDEVGNSNYVEAENKYGRAMKG APSDSLFAQFCLHALWFGNCHIRAIAVLWIDFVREIRWCWEESERLPRMKSTSSIDLCTCLIHQ KLHMIIAPLSASGVVLDDPESTKLLSSVAIALSNCGSNWPAFVPVHDPSRKAYIGIQNLGTVFT RRFEADRIGSQVPIRLMHLEGLHELFLSKFVLSSTDFPARVKVIFSMKLTYRTPEYDYYNEETL VSEANESIAESEVANHPKKQWDDDCSWAEWYSAEDPVKGFELTAIWGERVFEETLEMAEVENAS SFDADRWLLHPIVSPYMVDDSIGKFVGFASQLQLLVKAFESSAEAQFLEDFVAADTSGQENSKS TVTVPPPSVVDRVMKDLFNDEVGNSNYVEAENKYGRAMKGAPSDSLFAQFCLHALWFGNCHIRA IAVLWIDFVREIRWCWEESERLPRMKSTSSIDLCTCLIHQKLHMIIAPLSASGVVLDDPESTKL LSSVAIALSNCGSNWPAFVPVHDPSRKAYIGIQNLGTVFTRRFEADRIGSQVPIRLMHLEGLHE LFLSKFVLSSTDFPARVKVIFSMKLTYRTPEYDYYNEETLVSEANESIAESEVANHPKKQWDDD CSWAEWYSAEDPVKGFELTAIWGERVFEETLEMAEVENASSFDADRWLLHPIVSPYMVDDSIGK FVGFASQLQLLVKAFESSAEAQFLEDFVAADTSGQENSKSTVTVPPPSVVDRVMKDLFNDEVGN SNYVEAENKYGRAMKGAPSDSLFAQFCLHALWFGNCHIRAIAVLWIDFVREIRWCWEESERLPR MKSTSSIDLCTCLIHQKLHM(+) MEKITFTLAGKSVEDRTNFDRNSSCNPSRCMSRIGTWLPIRSASNLRVNTVPKFWIPIYALREG SCTGTKAGQLLPQLDRAIATELKSLVDSGSSSTTPLALKGAIIICNFWCIRQVQRSILEVLFIL GNRSDSSQHQRISRTKSIHRTAIARIWQLPNHRACKQNWAKSESEGAPFIARPYLFSAST*(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Lu et al., 2015;Ye et al., 2015;Chu et al., 2017

circRNA

Detail information of Os03g0295700_circ_g.4

Address

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