Plant Circular RNA Database

Detail information of Zm00001d007905_circ_g.1

			
						 General Information
					
						CircRNA Name
						Zm00001d007905_circ_g.1
					
						ID in PlantcircBase
						zma_circ_007448
					
						Alias
						Zm02circ00127, zma_circ_0000936
					
						Organism
						
							Zea mays						
					
						Position
						
							chr2: 242182240-242185666  JBrowse»						
					
						Reference genome
						
							AGPv4.38						
					
						Type  
						
							u-circRNA							
									
						Identification method
						CIRI2, find_circ
					
						Parent gene
						
							Zm00001d007905						
					
						Parent gene annotation
						
							Valine--tRNA ligase chloroplastic/mitochondrial 2
							
						Parent gene strand
						-
					
						Alternative splicing
						
							Zm00001d007905_circ_g.2 						
					
						Support reads
						NA
					
						Tissues
						leaf, endosperm, root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Zm00001d007905_T009:6
Zm00001d007905_T016:5
Zm00001d007905_T022:6
Zm00001d007905_T002:6
Zm00001d007905_T004:4
Zm00001d007905_T015:6
Zm00001d007905_T012:5
Zm00001d007905_T001:6
Zm00001d007905_T019:6
Zm00001d007905_T024:8
Zm00001d007905_T007:5
Zm00001d007905_T008:6
Zm00001d007905_T003:6
Zm00001d007905_T020:3
Zm00001d007905_T018:3
Zm00001d007905_T023:6

General Information
CircRNA Name	Zm00001d007905_circ_g.1
ID in PlantcircBase	zma_circ_007448
Alias	Zm02circ00127, zma_circ_0000936
Organism	Zea mays
Position	chr2: 242182240-242185666 JBrowse»
Reference genome	AGPv4.38
Type	u-circRNA
Identification method	CIRI2, find_circ
Parent gene	Zm00001d007905
Parent gene annotation	Valine--tRNA ligase chloroplastic/mitochondrial 2
Parent gene strand	-
Alternative splicing	Zm00001d007905_circ_g.2
Support reads	NA
Tissues	leaf, endosperm, root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Zm00001d007905_T009:6 Zm00001d007905_T016:5 Zm00001d007905_T022:6 Zm00001d007905_T002:6 Zm00001d007905_T004:4 Zm00001d007905_T015:6 Zm00001d007905_T012:5 Zm00001d007905_T001:6 Zm00001d007905_T019:6 Zm00001d007905_T024:8 Zm00001d007905_T007:5 Zm00001d007905_T008:6 Zm00001d007905_T003:6 Zm00001d007905_T020:3 Zm00001d007905_T018:3 Zm00001d007905_T023:6

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							TAAGAATTGGCAGTCCAAGCTTTCGAGCAATATGATAATCGTTATGATCATGTCCAGGGCTAAT
CTTCAGCACCCCAGTTCCAAATTCTGGATCAACATActcagcatcccggataagaccatgtaga
tagacataagaaaatggtactgatcctgtgaactcaattcccatcatgaccattcgtgcaaccc
agaagaac

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 807
Transcript exons: 242182240-242182351,242182466-242182555,242184401-242184
621,242184749-242184865,242184951-242185068,242185518-24
2185666
CTCAGCATCCCGGATAAGACCATGTAGATAGACATAAGAAAATGGTACTGATCCTGTGAACTCA
ATTCCCATCATGACCATTCGTGCAACCCAGAAGAACAAAATATCGTGGCCTGTCTCCAGAACAG
TTGAAGGATAAAAATGCTTATAATCCTCCTTGGAAAGATCAGGCCAACCAAGCGTGCTGAAAGG
CCACAGAGCACTTGAGAACCAAGTATCAAGAACATCAGGGTCTTGATATATTTCAACTGATTTT
CCATATTTTTCATGAGCTTCTGCAATCGCCTCCTCTTCGGTTCTAGCAACAATATAGTCTTCTT
CACATTTCTTTCCAACAATATACCAAACTGGTATACGATGACCCCACCACAATTGTCTACTTAT
ACACCAATCCTTTATGTTCGTTAGCCAATGATTATAAATCTTCTCAAATCTCTCCGGAAGAATG
GTTAATTGCCCCTTTTCAACAGCATGGAGAGCCTTTTCAGCCAATGGCTCCATCGTAACAAACC
ATTGCTTACTAATCAAAGGCTCAATAACTTCACCACCCCGTTGGGACCTAGGGACTCGAAGTGT
ATATGGTTCTTTCTTTACTGCTAAGTTAGTCTCAACAAGGTCAGACCACAATTTCTCTCGGGCT
TCAAATCGATCCATACCACTGTATATTCCAGCAACATCATTGAGCGTACCATCTTTGTTCATAA
CATTAAGAATTGGCAGTCCAAGCTTTCGAGCAATATGATAATCGTTATGATCATGTCCAGGGCT
AATCTTCAGCACCCCAGTTCCAAATTCTGGATCAACATA
						
					

						Genomic sequence
						
							CTCAGCATCCCGGATAAGACCATGTAGATAGACATAAGAAAATGGTACTGATCCTGTGAACTCA
ATTCCCATCATGACCATTCGTGCAACCCAGAAGAACAAAATATCGTGGCTGTGAAGGAAAGTGC
CAGGCATCAATGTAAAGAACAGAAACTTGGCAGCAACACAAGTATTAATCTACTGAAAGAAGAA
AAGATAAATCAAAATGTTGCCAAAACTAACATACCCTGTCTCCAGAACAGTTGAAGGATAAAAA
TGCTTATAATCCTCCTTGGAAAGATCAGGCCAACCAAGCGTGCTGAAAGGCCACAGAGCACTGC
AGGACAATAGCAACAATTGAAAACAACAGAAACTATAGTGCTTTTTATTTTGACAGGTAAAAAA
ACAGTGTGAACCCAATTATGGTATTGAAACTGTATATTTCAACAAAAAACTCGGCCGGGGAGGG
AAAGACCGCCCTCCCGGTATTATATTAAGAAGAGACCGAAACAATGGTCCCGGCCGAGAAAATC
CCCGAACCCTGGCCCCCCATCACTAACGGGCCGGCGTCAACTGTCGACTCTGCAACGGCCCAAC
CGGAGGGTGGCGCACAGGACATCGTAACCCGAGAGCGGATGGGGCACAGCGAGGGGATTTTTTT
AACCAAGCCTGAAAATTCGCTCCCGGGGGGAATCGAACCCAAGACTTGGAGGTGCTACTCGGAA
GTCCTTAACCACTAGGCTAGAGGCCCATCACTAACGAGCTAGACTCGTGCTTCAACCAGGCTGA
CAAGCTTTTAATGAGTAGCTTGATTAGGCTCATCCCTGCGTTTTCTCTGGCTAGTCGGTTGCCT
CCCTATCTTGTTTGAGTTGTTTCCATTCAGTCATTCACTGAAGGGTCTTTTGGCCCAAGGCCCA
ACTACAACCCAAGCAAATCAGCAAATTACATCCCCCTAGAGTCTGACAGAACCTTGAGATGCCA
CTACCCATGTTGACCTCAATACCTCATCATGACCAAGGCCTAAGTGGCAAGCAAGCACCAAATC
TTCCCCTTCATCTCCATTCCTTGTCTGGCTGTGTACCAGACTATCATGCACACTCCCTAGAATC
CCAATGGCTATTTTCTTTTCTTCTCTTGTTCCTTTCTTCCTGATTCATCCATTGGAGCAGATCT
TGAATCTTGGTTGATGTCTTTTTTGAAATCTAATGGTTCCATTGACAGTTCCTCTTCCTCTCCA
TGATTCCAACCTCCCAGCATAGTTGTCGTCTGGCGATAGATATGCATTACCGAGCTTCAGCGAA
AGCGAACTGAACTCGAGCTTTGTTTGAGTTGAGCTTATAGTCCAGCTCGACTATAAGCTCAGCA
ACTAAAATGGGCCTCTCGAGCTTGACTACATAGTGTGACAGTCTGGACCCCGCGACCCTGGGCT
CGCTGAGCTCGGTTTGTTGACAACCATGATACAAGGGCTAAACGAACCTAACACCTGGCAGGTG
AGGCTCCCGCCTTTTTGAACAGTAATAATACAAATAAGCTCCATGTCGATCAGTCACATACTGC
AGAGAAAGGAGAAAGGGCATACTCCACAGTACAAGTAGTTCAAAATATGCAGGTCATGAAATGT
TTACTGTTATTCAAGGAAAACCCATAATAAATCTTCGAAAATTTACAAGAAATGTGTTTATGAA
GCTGATGCTTAGTCCCAAAAATAGAATTTTTAGTTTTATTTAATGAATCCATCAATCCAAACAC
ATTTTCTGTTATGACGGGCATCCCATACAGCCGTCGCAGCCACAAGATAAAATGGGTAGAGTTT
GTTAGATTAGATAGAGTTTGTTAGATCGGATAGAGTTTGTTAAGATCAAGTTCCCAAACTAATC
TACTGTTCATCTGCACTAATGTTCACAGCCAACTACTGTCCATGCGTGAACAGTGCCACACCAC
GGCGCCGCCCCTGCCAGCAGTCCTAATCCTGGGACGACGGCGCCCAAGCGCCGGGGTCCTAGTC
ATAGACCTCAAACCTACCACTCGTACTACCTCCGTAACCCTAATTCCAACATTTTCCTATCAAA
GTAAAAATCCTTGCAAAACCCCAAATTTACAAATAAAAATATAATCGTGCAATAAACTAATACA
TAACGCAGAAAAACAATTGGGACCACAAATTTCGCAGAGGAAGACAGACCTTGAGAACCAAGTA
TCAAGAACATCAGGGTCTTGATATATTTCAACTGATTTTCCATATTTTTCATGAGCTTCTGCAA
TCGCCTCCTCTTCGGTTCTAGCAACAATATAGTCTTCTTCACATTTCTTTCCAACAATATACCA
AACTGGTATACGATGACCCCACCACAATTGTCTACTTATACACCAATCCTTTATGTTCGTTAGC
CAATGATTATAAATCTGCAGCACAAGCACACCAAAAAAAGAAAGGGCAATGTGAAAATACATTC
GACAGCCCTGATTTTGCCAGTTCATAATCATATGAGCAGATAACTCTCTAAAGAGTAAAAATGA
ATTCATGCAATACCTTCTCAAATCTCTCCGGAAGAATGGTTAATTGCCCCTTTTCAACAGCATG
GAGAGCCTTTTCAGCCAATGGCTCCATCGTAACAAACCATTGCTTACTAATCAAAGGCTCAATA
ACCTAGGATCAAACGGAAGTAGGTCCATCAAGCCCTATGGAAAACATCAACAAAAGAATATCAC
TAAGAACAGGAAAGGGGTCACACTTCACCACCCCGTTGGGACCTAGGGACTCGAAGTGTATATG
GTTCTTTCTTTACTGCTAAGTTAGTCTCAACAAGGTCAGACCACAATTTCTCTCGGGCTTCAAA
TCGATCCATACCACTGAAACAAGAAGAAAGTTAGTATCAGAAACATGTGGCGCACAAAGCCATA
GAAAGGATTTCTGTAAAAATATAGCACTTCCTTTTCCACATGCATCAGTTAAATTAATTAATCC
CAACTTTGTACAAAAGCTCAAAGCAACAAATAGCGTGCCTCTCTCTCAAACTTTCTAGAATACA
AAGTCCTGTAGGTTATGTTAAGCAGGTCCCATTAGGTTGTTTCAGTGTCATTAAATAGAAGGCA
TATTAAGACTATGACAGAGAAGCATATATGGTCCTCAAACAATGAAGCATATATGAATCTGAGT
AGCCAAAATTCAGTGTCTTTGTAAATGACGTGACATGAATATAAAGAAGAAATTGCACAGAAAA
AAATGTGAACTAGCAAATGAATCACAGATAAGAAAACTATGGTTTTGTTCACCTGAGTTTGGAG
AGAAAAATACATACCTGTATATTCCAGCAACATCATTGAGCGTACCATCTTTGTTCATAACATT
AAGAATTGGCAGTCCAAGCTTTCGAGCAATATGATAATCGTTATGATCATGTCCAGGGCTAATC
TTCAGCACCCCAGTTCCAAATTCTGGATCAACATA
						
					

			
		

Sequences
Splice junction sequence	TAAGAATTGGCAGTCCAAGCTTTCGAGCAATATGATAATCGTTATGATCATGTCCAGGGCTAAT CTTCAGCACCCCAGTTCCAAATTCTGGATCAACATActcagcatcccggataagaccatgtaga tagacataagaaaatggtactgatcctgtgaactcaattcccatcatgaccattcgtgcaaccc agaagaac
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 807 Transcript exons: 242182240-242182351,242182466-242182555,242184401-242184 621,242184749-242184865,242184951-242185068,242185518-24 2185666 CTCAGCATCCCGGATAAGACCATGTAGATAGACATAAGAAAATGGTACTGATCCTGTGAACTCA ATTCCCATCATGACCATTCGTGCAACCCAGAAGAACAAAATATCGTGGCCTGTCTCCAGAACAG TTGAAGGATAAAAATGCTTATAATCCTCCTTGGAAAGATCAGGCCAACCAAGCGTGCTGAAAGG CCACAGAGCACTTGAGAACCAAGTATCAAGAACATCAGGGTCTTGATATATTTCAACTGATTTT CCATATTTTTCATGAGCTTCTGCAATCGCCTCCTCTTCGGTTCTAGCAACAATATAGTCTTCTT CACATTTCTTTCCAACAATATACCAAACTGGTATACGATGACCCCACCACAATTGTCTACTTAT ACACCAATCCTTTATGTTCGTTAGCCAATGATTATAAATCTTCTCAAATCTCTCCGGAAGAATG GTTAATTGCCCCTTTTCAACAGCATGGAGAGCCTTTTCAGCCAATGGCTCCATCGTAACAAACC ATTGCTTACTAATCAAAGGCTCAATAACTTCACCACCCCGTTGGGACCTAGGGACTCGAAGTGT ATATGGTTCTTTCTTTACTGCTAAGTTAGTCTCAACAAGGTCAGACCACAATTTCTCTCGGGCT TCAAATCGATCCATACCACTGTATATTCCAGCAACATCATTGAGCGTACCATCTTTGTTCATAA CATTAAGAATTGGCAGTCCAAGCTTTCGAGCAATATGATAATCGTTATGATCATGTCCAGGGCT AATCTTCAGCACCCCAGTTCCAAATTCTGGATCAACATA
Genomic sequence	CTCAGCATCCCGGATAAGACCATGTAGATAGACATAAGAAAATGGTACTGATCCTGTGAACTCA ATTCCCATCATGACCATTCGTGCAACCCAGAAGAACAAAATATCGTGGCTGTGAAGGAAAGTGC CAGGCATCAATGTAAAGAACAGAAACTTGGCAGCAACACAAGTATTAATCTACTGAAAGAAGAA AAGATAAATCAAAATGTTGCCAAAACTAACATACCCTGTCTCCAGAACAGTTGAAGGATAAAAA TGCTTATAATCCTCCTTGGAAAGATCAGGCCAACCAAGCGTGCTGAAAGGCCACAGAGCACTGC AGGACAATAGCAACAATTGAAAACAACAGAAACTATAGTGCTTTTTATTTTGACAGGTAAAAAA ACAGTGTGAACCCAATTATGGTATTGAAACTGTATATTTCAACAAAAAACTCGGCCGGGGAGGG AAAGACCGCCCTCCCGGTATTATATTAAGAAGAGACCGAAACAATGGTCCCGGCCGAGAAAATC CCCGAACCCTGGCCCCCCATCACTAACGGGCCGGCGTCAACTGTCGACTCTGCAACGGCCCAAC CGGAGGGTGGCGCACAGGACATCGTAACCCGAGAGCGGATGGGGCACAGCGAGGGGATTTTTTT AACCAAGCCTGAAAATTCGCTCCCGGGGGGAATCGAACCCAAGACTTGGAGGTGCTACTCGGAA GTCCTTAACCACTAGGCTAGAGGCCCATCACTAACGAGCTAGACTCGTGCTTCAACCAGGCTGA CAAGCTTTTAATGAGTAGCTTGATTAGGCTCATCCCTGCGTTTTCTCTGGCTAGTCGGTTGCCT CCCTATCTTGTTTGAGTTGTTTCCATTCAGTCATTCACTGAAGGGTCTTTTGGCCCAAGGCCCA ACTACAACCCAAGCAAATCAGCAAATTACATCCCCCTAGAGTCTGACAGAACCTTGAGATGCCA CTACCCATGTTGACCTCAATACCTCATCATGACCAAGGCCTAAGTGGCAAGCAAGCACCAAATC TTCCCCTTCATCTCCATTCCTTGTCTGGCTGTGTACCAGACTATCATGCACACTCCCTAGAATC CCAATGGCTATTTTCTTTTCTTCTCTTGTTCCTTTCTTCCTGATTCATCCATTGGAGCAGATCT TGAATCTTGGTTGATGTCTTTTTTGAAATCTAATGGTTCCATTGACAGTTCCTCTTCCTCTCCA TGATTCCAACCTCCCAGCATAGTTGTCGTCTGGCGATAGATATGCATTACCGAGCTTCAGCGAA AGCGAACTGAACTCGAGCTTTGTTTGAGTTGAGCTTATAGTCCAGCTCGACTATAAGCTCAGCA ACTAAAATGGGCCTCTCGAGCTTGACTACATAGTGTGACAGTCTGGACCCCGCGACCCTGGGCT CGCTGAGCTCGGTTTGTTGACAACCATGATACAAGGGCTAAACGAACCTAACACCTGGCAGGTG AGGCTCCCGCCTTTTTGAACAGTAATAATACAAATAAGCTCCATGTCGATCAGTCACATACTGC AGAGAAAGGAGAAAGGGCATACTCCACAGTACAAGTAGTTCAAAATATGCAGGTCATGAAATGT TTACTGTTATTCAAGGAAAACCCATAATAAATCTTCGAAAATTTACAAGAAATGTGTTTATGAA GCTGATGCTTAGTCCCAAAAATAGAATTTTTAGTTTTATTTAATGAATCCATCAATCCAAACAC ATTTTCTGTTATGACGGGCATCCCATACAGCCGTCGCAGCCACAAGATAAAATGGGTAGAGTTT GTTAGATTAGATAGAGTTTGTTAGATCGGATAGAGTTTGTTAAGATCAAGTTCCCAAACTAATC TACTGTTCATCTGCACTAATGTTCACAGCCAACTACTGTCCATGCGTGAACAGTGCCACACCAC GGCGCCGCCCCTGCCAGCAGTCCTAATCCTGGGACGACGGCGCCCAAGCGCCGGGGTCCTAGTC ATAGACCTCAAACCTACCACTCGTACTACCTCCGTAACCCTAATTCCAACATTTTCCTATCAAA GTAAAAATCCTTGCAAAACCCCAAATTTACAAATAAAAATATAATCGTGCAATAAACTAATACA TAACGCAGAAAAACAATTGGGACCACAAATTTCGCAGAGGAAGACAGACCTTGAGAACCAAGTA TCAAGAACATCAGGGTCTTGATATATTTCAACTGATTTTCCATATTTTTCATGAGCTTCTGCAA TCGCCTCCTCTTCGGTTCTAGCAACAATATAGTCTTCTTCACATTTCTTTCCAACAATATACCA AACTGGTATACGATGACCCCACCACAATTGTCTACTTATACACCAATCCTTTATGTTCGTTAGC CAATGATTATAAATCTGCAGCACAAGCACACCAAAAAAAGAAAGGGCAATGTGAAAATACATTC GACAGCCCTGATTTTGCCAGTTCATAATCATATGAGCAGATAACTCTCTAAAGAGTAAAAATGA ATTCATGCAATACCTTCTCAAATCTCTCCGGAAGAATGGTTAATTGCCCCTTTTCAACAGCATG GAGAGCCTTTTCAGCCAATGGCTCCATCGTAACAAACCATTGCTTACTAATCAAAGGCTCAATA ACCTAGGATCAAACGGAAGTAGGTCCATCAAGCCCTATGGAAAACATCAACAAAAGAATATCAC TAAGAACAGGAAAGGGGTCACACTTCACCACCCCGTTGGGACCTAGGGACTCGAAGTGTATATG GTTCTTTCTTTACTGCTAAGTTAGTCTCAACAAGGTCAGACCACAATTTCTCTCGGGCTTCAAA TCGATCCATACCACTGAAACAAGAAGAAAGTTAGTATCAGAAACATGTGGCGCACAAAGCCATA GAAAGGATTTCTGTAAAAATATAGCACTTCCTTTTCCACATGCATCAGTTAAATTAATTAATCC CAACTTTGTACAAAAGCTCAAAGCAACAAATAGCGTGCCTCTCTCTCAAACTTTCTAGAATACA AAGTCCTGTAGGTTATGTTAAGCAGGTCCCATTAGGTTGTTTCAGTGTCATTAAATAGAAGGCA TATTAAGACTATGACAGAGAAGCATATATGGTCCTCAAACAATGAAGCATATATGAATCTGAGT AGCCAAAATTCAGTGTCTTTGTAAATGACGTGACATGAATATAAAGAAGAAATTGCACAGAAAA AAATGTGAACTAGCAAATGAATCACAGATAAGAAAACTATGGTTTTGTTCACCTGAGTTTGGAG AGAAAAATACATACCTGTATATTCCAGCAACATCATTGAGCGTACCATCTTTGTTCATAACATT AAGAATTGGCAGTCCAAGCTTTCGAGCAATATGATAATCGTTATGATCATGTCCAGGGCTAATC TTCAGCACCCCAGTTCCAAATTCTGGATCAACATA

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.083297208

Conservation Information
Conserved circRNAs	NA
PMCS	0.083297208

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							242185599-242182263(+)
242185563-242182242(-)
242182276-242185635(-)
						
						Potential amino acid sequence
						
							MIIVMIMSRANLQHPSSKFWINILSIPDKTM*(+)
MNKDGTLNDVAGIYSGMDRFEAREKLWSDLVETNLAVKKEPYTLRVPRSQRGGEVIEPLISKQW
FVTMEPLAEKALHAVEKGQLTILPERFEKIYNHWLTNIKDWCISRQLWWGHRIPVWYIVGKKCE
EDYIVARTEEEAIAEAHEKYGKSVEIYQDPDVLDTWFSSALWPFSTLGWPDLSKEDYKHFYPST
VLETGHDILFFWVARMVMMGIEFTGSVPFSYVYLHGLIRDAEYVDPEFGTGVLKISPGHDHNDY
HIARKLGLPILNVMNKDGTLNDVAGIYSGMDRFEAREKLWSDLVETNLAVKKEPYTLRVPRSQR
GGEVIEPLISKQWFVTMEPLAEKALHAVEKGQLTILPERFEKIYNHWLTNIKDWCISRQLWWGH
RIPVWYIVGKKCEEDYIVARTEEEAIAEAHEKYGKSVEIYQDPDVLDTWFSSALWPFSTLGWPD
LSKEDYKHFYPSTVLETGHDILFFWVARMVMMGIEFTGSVPFSYVYLHGLIRDAEYVDPEFGTG
VLKISPGHDHNDYHIARKLGLPILNVMNKDGTLNDVAGIYSGMDRFEAREKLWSDLVETNLAVK
KEPYTLRVPRSQRGGEVIEPLISKQWFVTMEPLAEKALHAVEKGQLTILPERFEKIYNHWLTNI
KDWCISRQLWWGHRIPVWYIVGKKCEEDYIVARTEEEAIAEAHEKYGKSVEIYQDPDVLDTWFS
SALWPFSTLGWPDLSKEDYKHFYPSTVLETGHDILFFWVARMVMMGIEFTGSVPFSYVYLHGLI
RDAEYVDPEFGTGVLKISPGHDHNDYHIARKLGLPILNVMNKDGTLNDVAGIYSGMDRFEAREK
LWSDLVETNLAVKKEPYTLRVPRSQRGGEVIEPLISKQWFVTMEPLAEKALHAVEKGQLTILPE
RFEKIYNHWLTNIKDWCISRQLWWGHRIPVWYIVGKKCEEDYIVARTEEEAIAEAHEKYGKSVE
IYQDPDVLDTWFSSALWPFSTLGWPDLSKEDYKHFYPSTVLETGHDILFFWVARMVMMGIEFTG
SVPFSYVYLHGLIRDAE(-)
MSIYMVLSGMLSMLIQNLELGC*(-)
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	Y
Potential coding position	242185599-242182263(+) 242185563-242182242(-) 242182276-242185635(-)
Potential amino acid sequence	MIIVMIMSRANLQHPSSKFWINILSIPDKTM(+) MNKDGTLNDVAGIYSGMDRFEAREKLWSDLVETNLAVKKEPYTLRVPRSQRGGEVIEPLISKQW FVTMEPLAEKALHAVEKGQLTILPERFEKIYNHWLTNIKDWCISRQLWWGHRIPVWYIVGKKCE EDYIVARTEEEAIAEAHEKYGKSVEIYQDPDVLDTWFSSALWPFSTLGWPDLSKEDYKHFYPST VLETGHDILFFWVARMVMMGIEFTGSVPFSYVYLHGLIRDAEYVDPEFGTGVLKISPGHDHNDY HIARKLGLPILNVMNKDGTLNDVAGIYSGMDRFEAREKLWSDLVETNLAVKKEPYTLRVPRSQR GGEVIEPLISKQWFVTMEPLAEKALHAVEKGQLTILPERFEKIYNHWLTNIKDWCISRQLWWGH RIPVWYIVGKKCEEDYIVARTEEEAIAEAHEKYGKSVEIYQDPDVLDTWFSSALWPFSTLGWPD LSKEDYKHFYPSTVLETGHDILFFWVARMVMMGIEFTGSVPFSYVYLHGLIRDAEYVDPEFGTG VLKISPGHDHNDYHIARKLGLPILNVMNKDGTLNDVAGIYSGMDRFEAREKLWSDLVETNLAVK KEPYTLRVPRSQRGGEVIEPLISKQWFVTMEPLAEKALHAVEKGQLTILPERFEKIYNHWLTNI KDWCISRQLWWGHRIPVWYIVGKKCEEDYIVARTEEEAIAEAHEKYGKSVEIYQDPDVLDTWFS SALWPFSTLGWPDLSKEDYKHFYPSTVLETGHDILFFWVARMVMMGIEFTGSVPFSYVYLHGLI RDAEYVDPEFGTGVLKISPGHDHNDYHIARKLGLPILNVMNKDGTLNDVAGIYSGMDRFEAREK LWSDLVETNLAVKKEPYTLRVPRSQRGGEVIEPLISKQWFVTMEPLAEKALHAVEKGQLTILPE RFEKIYNHWLTNIKDWCISRQLWWGHRIPVWYIVGKKCEEDYIVARTEEEAIAEAHEKYGKSVE IYQDPDVLDTWFSSALWPFSTLGWPDLSKEDYKHFYPSTVLETGHDILFFWVARMVMMGIEFTG SVPFSYVYLHGLIRDAE(-) MSIYMVLSGMLSMLIQNLELGC(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Han et al., 2020; Ma et al., 2021b

circRNA

Detail information of Zm00001d007905_circ_g.1

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