Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d025129_circ_g.1 |
ID in PlantcircBase | zma_circ_010281 |
Alias | Zm10circ00037, zma_circ_0003201, GRMZM2G126496_C1 |
Organism | Zea mays |
Position | chr10: 105656618-105657473 JBrowse» |
Reference genome | AGPv4.38 |
Type | ei-circRNA |
Identification method | CIRI2, find_circ |
Parent gene | Zm00001d025129 |
Parent gene annotation |
Short-chain dehydrogenase TIC 32 chloroplastic |
Parent gene strand | + |
Alternative splicing | Zm00001d025129_circ_g.2 Zm00001d025129_circ_g.3 |
Support reads | NA |
Tissues | leaf, endosperm, root |
Exon boundary | No-Yes |
Splicing signals | GT-AG |
Number of exons covered | Zm00001d025129_T001:3 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.119218633 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Han et al., 2020; Ma et al., 2021b;Zhang et al., 2019 |