Detailed infomation of each circRNA
General Information | |
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CircRNA Name | BGIOSGA032292_circ_ig.3 |
ID in PlantcircBase | osi_circ_008763 |
Alias | Chr10:3049498_3049818(MH63RS2), Chr10:3119150_3119470(ZS97RS2) |
Organism | Oryza sativa ssp. indica |
Position | chr10: 2511512-2511832 JBrowse» |
Reference genome | Oryza_indica.ASM465v1.42 |
Type | ig-circRNA |
Identification method | CIRI2, CIRI2 |
Parent gene | NA |
Parent gene annotation | NA |
Parent gene strand | NA |
Alternative splicing | BGIOSGA032292_circ_ig.1 BGIOSGA032292_circ_ig.2 |
Support reads | NA |
Tissues | root, leaf, panicle |
Exon boundary | NA-NA |
Splicing signals | CT-AA |
Number of exons covered | NA |
Conservation Information | |
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Conserved circRNAs |
osa_circ_003384 osa_circ_003379 osa_circ_003378 osa_circ_003377 osa_circ_003380 osa_circ_003376 osa_circ_003375 osa_circ_003374 osa_circ_003383 osa_circ_003373 osa_circ_003372 osa_circ_003371 osa_circ_003370 osa_circ_003382 osa_circ_003369 osa_circ_003387 |
PMCS |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Zhou et al., 2021 |