Splice junction sequence |
AAAGAAAGCTGACTCTACAAGCCAGAGACAAAGCCCTGCCAATACGGAAACCCTAGCAACTTGA GGATTTCCAGCTCCCAATTTGTTTGACACTCGTGTGctgttccttccagttcatggaggctgtg acgatagccagtaaagtggcttgcaccgcggatccaaccataacaccgcaccagagtccttttc cattccac
|
Assembled circRNA sequence |
Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
|
Full-length trsnacripts |
Transcript length: 175 Transcript exons: 1357442-1357530,1357801-1357886 CTGTTCCTTCCAGTTCATGGAGGCTGTGACGATAGCCAGTAAAGTGGCTTGCACCGCGGATCCA ACCATAACACCGCACCAGAGTCCTTCTACAAGCCAGAGACAAAGCCCTGCCAATACGGAAACCC TAGCAACTTGAGGATTTCCAGCTCCCAATTTGTTTGACACTCGTGTG
Transcript length: 445 Transcript exons: 1357442-1357886 CTGTTCCTTCCAGTTCATGGAGGCTGTGACGATAGCCAGTAAAGTGGCTTGCACCGCGGATCCA ACCATAACACCGCACCAGAGTCCTTTTCCATTCCACTCACGACTGAAAGCTAAGTAAACTCCAA CAGGAGCTCCTACAAGATAATAAGCCACCACGTTGATCAAAGCTCCAATGTGTTGCCACCCACA TCCCCTAGCCACTCCATTTAGAACTGCCGTTAATCCGTCGAGGATGAAGGAGAGACAGAGCAAA GGAGATATGTCAGCAACATAGTCAACAACTTCTTTGCTGTTGCTGAATGTGTAGCCTATGATGT TTCGGCAGGTGAAGAGAAGTGTGCTAAAGAAAGCTGACTCTACAAGCCAGAGACAAAGCCCTGC CAATACGGAAACCCTAGCAACTTGAGGATTTCCAGCTCCCAATTTGTTTGACACTCGTGTG
|
Genomic sequence |
CTGTTCCTTCCAGTTCATGGAGGCTGTGACGATAGCCAGTAAAGTGGCTTGCACCGCGGATCCA ACCATAACACCGCACCAGAGTCCTTTTCCATTCCACTCACGACTGAAAGCTAAGTAAACTCCAA CAGGAGCTCCTACAAGATAATAAGCCACCACGTTGATCAAAGCTCCAATGTGTTGCCACCCACA TCCCCTAGCCACTCCATTTAGAACTGCCGTTAATCCGTCGAGGATGAAGGAGAGACAGAGCAAA GGAGATATGTCAGCAACATAGTCAACAACTTCTTTGCTGTTGCTGAATGTGTAGCCTATGATGT TTCGGCAGGTGAAGAGAAGTGTGCTAAAGAAAGCTGACTCTACAAGCCAGAGACAAAGCCCTGC CAATACGGAAACCCTAGCAACTTGAGGATTTCCAGCTCCCAATTTGTTTGACACTCGTGTG |