Detailed infomation of each circRNA
General Information | |
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CircRNA Name | AT4G25700_circ_g.4 |
ID in PlantcircBase | ath_circ_032803 |
Alias | NA |
Organism | Arabidpsis thaliana |
Position | chr4: 13094995-13095129 JBrowse» |
Reference genome | TAIR10.38 |
Type | e-circRNA |
Identification method | PcircRNA_finder |
Parent gene | AT4G25700 |
Parent gene annotation |
Beta-carotene 3-hydroxylase 1, chloroplastic |
Parent gene strand | - |
Alternative splicing | AT4G25700_circ_g.1 AT4G25700_circ_g.2 AT4G25700_circ_g.3 AT4G25700_circ_g.5 AT4G25700_circ_g.6 |
Support reads | 21 |
Tissues | leaf |
Exon boundary | Yes-Yes |
Splicing signals | CT-AC |
Number of exons covered | AT4G25700.1:1 AT4G25700.3:1 AT4G25700.2:1 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.360491419 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chu et al., 2017 |