Detailed infomation of each circRNA
General Information | |
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CircRNA Name | AT1G09160_circ_g.3 |
ID in PlantcircBase | ath_circ_001585 |
Alias | NA |
Organism | Arabidpsis thaliana |
Position | chr1: 2953846-2955094 JBrowse» |
Reference genome | TAIR10.38 |
Type | ue-circRNA |
Identification method | CIRCexplorer |
Parent gene | AT1G09160 |
Parent gene annotation |
Probable protein phosphatase 2C 5 |
Parent gene strand | - |
Alternative splicing | AT1G09160_circ_g.1 AT1G09160_circ_g.2 AT1G09160_circ_g.4 AT1G09160_circ_g.5 AT1G09160_circ_g.6 AT1G09160_circ_g.7 |
Support reads | 5 |
Tissues | seedlings |
Exon boundary | Yes-Yes |
Splicing signals | CT-AC |
Number of exons covered | AT1G09160.1:5 AT1G09160.2:5 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.204674513 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | responsive to heat stress |
Other Information | |
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References | Pan et al., 2017 |