Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d044555_circ_g.1 |
ID in PlantcircBase | zma_circ_001598 |
Alias | circ718 |
Organism | Zea mays |
Position | chr3: 231676893-231679438 JBrowse» |
Reference genome | AGPv4.38 |
Type | u-circRNA |
Identification method | CIRI |
Parent gene | Zm00001d044555 |
Parent gene annotation |
Calcium permeable stress-gated cation channel 1 |
Parent gene strand | + |
Alternative splicing | Zm00001d044555_circ_g.2 |
Support reads | 5 |
Tissues | seedling leaves |
Exon boundary | No-Yes |
Splicing signals | GT-TA |
Number of exons covered | Zm00001d044555_T007:6 Zm00001d044555_T003:6 Zm00001d044555_T015:6 Zm00001d044555_T017:6 Zm00001d044555_T013:6 Zm00001d044555_T019:6 Zm00001d044555_T012:6 Zm00001d044555_T006:6 Zm00001d044555_T016:6 Zm00001d044555_T018:6 Zm00001d044555_T002:6 Zm00001d044555_T009:6 Zm00001d044555_T014:6 Zm00001d044555_T004:6 Zm00001d044555_T011:6 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.143641068 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chen et al., 2017b |