Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d047940_circ_g.1 |
ID in PlantcircBase | zma_circ_010066 |
Alias | zma_circ_0003098 |
Organism | Zea mays |
Position | chr9: 145886059-145886576 JBrowse» |
Reference genome | AGPv4.38 |
Type | u-circRNA |
Identification method | find_circ |
Parent gene | Zm00001d047940 |
Parent gene annotation |
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
Parent gene strand | - |
Alternative splicing | NA |
Support reads | NA |
Tissues | leaf, root |
Exon boundary | Yes-Yes |
Splicing signals | CT-AC |
Number of exons covered | Zm00001d047940_T012:1 Zm00001d047940_T009:2 Zm00001d047940_T007:1 Zm00001d047940_T014:3 Zm00001d047940_T006:1 Zm00001d047940_T008:2 Zm00001d047940_T010:1 Zm00001d047940_T013:1 Zm00001d047940_T011:1 |
Conservation Information | |
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Conserved circRNAs | osa_circ_018823 |
PMCS | 0.180802542 |
Functional Information | |
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Coding potential | Y |
Potential coding position |
145886532-145886147(+) |
Potential amino acid sequence |
MLLVPSLIWWSLEIPHTSPVVSILYLFEASMSFSSRESSFLHLES*(+) |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Ma et al., 2021b |