Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Os08g0564800_circ_g.3 |
ID in PlantcircBase | osa_circ_038150 |
Alias | Os08circ16957 |
Organism | Oryza sativa |
Position | chr8: 28300558-28301019 JBrowse» |
Reference genome | IRGSP-1.0.38 |
Type | e-circRNA |
Identification method | SMALT, Segemehl |
Parent gene | Os08g0564800 |
Parent gene annotation |
Coactivator CBP, KIX domain containing protein. (Os08t0564800-01 ) |
Parent gene strand | - |
Alternative splicing | Os08g0564800_circ_g.2 |
Support reads | 4 |
Tissues | leaf and panicle |
Exon boundary | No-No |
Splicing signals | GT-AG |
Number of exons covered | Os08t0564800-01:1 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.701160534 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Lu et al., 2015 |