Plant Circular RNA Database

Detail information of AT4G25500_circ_g.6

			
						 General Information
					
						CircRNA Name
						AT4G25500_circ_g.6
					
						ID in PlantcircBase
						ath_circ_032768
					
						Alias
						At_ciR277, Ath_circ_FC2808, AT4G25500_C1
					
						Organism
						
							Arabidpsis thaliana						
					
						Position
						
							chr4: 13026572-13027129  JBrowse»						
					
						Reference genome
						
							TAIR10.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						CIRCexplorer, CIRI, KNIFE, MapSplice, PcircRNA_finder, circRNA_finder, find_circ, CIRI2
					
						Parent gene
						
							AT4G25500						
					
						Parent gene annotation
						
							Serine/arginine-rich splicing factor RS40
							
						Parent gene strand
						+
					
						Alternative splicing
						
							AT4G25500_circ_g.7 						
					
						Support reads
						13/42/10
					
						Tissues
						leaf/root, aerial, inflorescences, whole_plant/seedlings
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						AT4G25500.6:1
AT4G25500.8:1
AT4G25500.7:1
AT4G25500.2:1
AT4G25500.5:1
AT4G25500.3:1
AT4G25500.4:1
AT4G25500.1:1

General Information
CircRNA Name	AT4G25500_circ_g.6
ID in PlantcircBase	ath_circ_032768
Alias	At_ciR277, Ath_circ_FC2808, AT4G25500_C1
Organism	Arabidpsis thaliana
Position	chr4: 13026572-13027129 JBrowse»
Reference genome	TAIR10.38
Type	e-circRNA
Identification method	CIRCexplorer, CIRI, KNIFE, MapSplice, PcircRNA_finder, circRNA_finder, find_circ, CIRI2
Parent gene	AT4G25500
Parent gene annotation	Serine/arginine-rich splicing factor RS40
Parent gene strand	+
Alternative splicing	AT4G25500_circ_g.7
Support reads	13/42/10
Tissues	leaf/root, aerial, inflorescences, whole_plant/seedlings
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	AT4G25500.6:1 AT4G25500.8:1 AT4G25500.7:1 AT4G25500.2:1 AT4G25500.5:1 AT4G25500.3:1 AT4G25500.4:1 AT4G25500.1:1

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							GGTCTAGCCCCGAGAATGGCCAAGTTGAAAGCCCTGGGTCAATAGGAAGAAGAGACAGTGATGG
TGGGTATGATGGTGCAGAGAGCCCAATGCAGAAGAGtaagctgatggataaggtgatctcggtg
gagtatgctgtgaaggatgatgatgctagaggaaatggacacagtcctgaaagacgccgtgata
ggtcacct

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 167
Transcript exons: 13026572-13026658,13027050-13027129
TAAGCTGATGGATAAGGTGATCTCGGTGGAGTATGCTGTGAAGGATGATGATGCTAGAGGAAAT
GGACACAGTCCTGAAAGACGCCGCAAGTTGAAAGCCCTGGGTCAATAGGAAGAAGAGACAGTGA
TGGTGGGTATGATGGTGCAGAGAGCCCAATGCAGAAGAG
Transcript length: 215
Transcript exons: 13026572-13026720,13027064-13027129
TAAGCTGATGGATAAGGTGATCTCGGTGGAGTATGCTGTGAAGGATGATGATGCTAGAGGAAAT
GGACACAGTCCTGAAAGACGCCGTGATAGGTCACCTGAAAGGAGAAGGCGATCACCTAGTCCTT
ACAAAAGAGAAAGAGGAAGCCTGGGTCAATAGGAAGAAGAGACAGTGATGGTGGGTATGATGGT
GCAGAGAGCCCAATGCAGAAGAG
Transcript length: 227
Transcript exons: 13026572-13026636,13026968-13027129
TAAGCTGATGGATAAGGTGATCTCGGTGGAGTATGCTGTGAAGGATGATGATGCTAGAGGAAAT
GGGAGAGTCCGAGAAATGGGGTTGGTGAAGTTGAAAGTCCCATTGAAAGGAGAGAGAGATCGAG
GTCTAGCCCCGAGAATGGCCAAGTTGAAAGCCCTGGGTCAATAGGAAGAAGAGACAGTGATGGT
GGGTATGATGGTGCAGAGAGCCCAATGCAGAAGAG
Transcript length: 241
Transcript exons: 13026572-13026631,13026936-13027055,13027069-13027129
TAAGCTGATGGATAAGGTGATCTCGGTGGAGTATGCTGTGAAGGATGATGATGCTAGAGGAGGA
TGAGCCCTAATCACAGCCCGTTCAAGAAGGAGAGTCCGAGAAATGGGGTTGGTGAAGTTGAAAG
TCCCATTGAAAGGAGAGAGAGATCGAGGTCTAGCCCCGAGAATGGCCAAGTTCAATAGGAAGAA
GAGACAGTGATGGTGGGTATGATGGTGCAGAGAGCCCAATGCAGAAGAG
Transcript length: 242
Transcript exons: 13026572-13026770,13027087-13027129
TAAGCTGATGGATAAGGTGATCTCGGTGGAGTATGCTGTGAAGGATGATGATGCTAGAGGAAAT
GGACACAGTCCTGAAAGACGCCGTGATAGGTCACCTGAAAGGAGAAGGCGATCACCTAGTCCTT
ACAAAAGAGAAAGAGGAAGCCCTGATTATGGCCGAGGAGCTAGTCCTGTTGCTGCCTACAGAAA
GGAAAGGGTGATGGTGGGTATGATGGTGCAGAGAGCCCAATGCAGAAGAG
Transcript length: 246
Transcript exons: 13026572-13026660,13026973-13027129
TAAGCTGATGGATAAGGTGATCTCGGTGGAGTATGCTGTGAAGGATGATGATGCTAGAGGAAAT
GGACACAGTCCTGAAAGACGCCGTGGTCCGAGAAATGGGGTTGGTGAAGTTGAAAGTCCCATTG
AAAGGAGAGAGAGATCGAGGTCTAGCCCCGAGAATGGCCAAGTTGAAAGCCCTGGGTCAATAGG
AAGAAGAGACAGTGATGGTGGGTATGATGGTGCAGAGAGCCCAATGCAGAAGAG
Transcript length: 273
Transcript exons: 13026572-13026657,13026943-13027129
TAAGCTGATGGATAAGGTGATCTCGGTGGAGTATGCTGTGAAGGATGATGATGCTAGAGGAAAT
GGACACAGTCCTGAAAGACGCCGCCCTAATCACAGCCCGTTCAAGAAGGAGAGTCCGAGAAATG
GGGTTGGTGAAGTTGAAAGTCCCATTGAAAGGAGAGAGAGATCGAGGTCTAGCCCCGAGAATGG
CCAAGTTGAAAGCCCTGGGTCAATAGGAAGAAGAGACAGTGATGGTGGGTATGATGGTGCAGAG
AGCCCAATGCAGAAGAG
Transcript length: 278
Transcript exons: 13026572-13026736,13027017-13027129
TAAGCTGATGGATAAGGTGATCTCGGTGGAGTATGCTGTGAAGGATGATGATGCTAGAGGAAAT
GGACACAGTCCTGAAAGACGCCGTGATAGGTCACCTGAAAGGAGAAGGCGATCACCTAGTCCTT
ACAAAAGAGAAAGAGGAAGCCCTGATTATGGCCGAGGAGAGAGAGATCGAGGTCTAGCCCCGAG
AATGGCCAAGTTGAAAGCCCTGGGTCAATAGGAAGAAGAGACAGTGATGGTGGGTATGATGGTG
CAGAGAGCCCAATGCAGAAGAG
Transcript length: 315
Transcript exons: 13026572-13026715,13026916-13027016,13027060-13027129
TAAGCTGATGGATAAGGTGATCTCGGTGGAGTATGCTGTGAAGGATGATGATGCTAGAGGAAAT
GGACACAGTCCTGAAAGACGCCGTGATAGGTCACCTGAAAGGAGAAGGCGATCACCTAGTCCTT
ACAAAAGAGAAAGAGGGTCCCAACAACAAGAGAGAGAGGATGAGCCCTAATCACAGCCCGTTCA
AGAAGGAGAGTCCGAGAAATGGGGTTGGTGAAGTTGAAAGTCCCATTGAAAGGGCCCTGGGTCA
ATAGGAAGAAGAGACAGTGATGGTGGGTATGATGGTGCAGAGAGCCCAATGCAGAAGAG
Transcript length: 355
Transcript exons: 13026572-13026769,13026969-13027069,13027074-13027129
TAAGCTGATGGATAAGGTGATCTCGGTGGAGTATGCTGTGAAGGATGATGATGCTAGAGGAAAT
GGACACAGTCCTGAAAGACGCCGTGATAGGTCACCTGAAAGGAGAAGGCGATCACCTAGTCCTT
ACAAAAGAGAAAGAGGAAGCCCTGATTATGGCCGAGGAGCTAGTCCTGTTGCTGCCTACAGAAA
GGAAAGGAGAGTCCGAGAAATGGGGTTGGTGAAGTTGAAAGTCCCATTGAAAGGAGAGAGAGAT
CGAGGTCTAGCCCCGAGAATGGCCAAGTTGAAAGCCCTGGGTCGGAAGAAGAGACAGTGATGGT
GGGTATGATGGTGCAGAGAGCCCAATGCAGAAGAG
Transcript length: 558
Transcript exons: 13026572-13027129
TAAGCTGATGGATAAGGTGATCTCGGTGGAGTATGCTGTGAAGGATGATGATGCTAGAGGAAAT
GGACACAGTCCTGAAAGACGCCGTGATAGGTCACCTGAAAGGAGAAGGCGATCACCTAGTCCTT
ACAAAAGAGAAAGAGGAAGCCCTGATTATGGCCGAGGAGCTAGTCCTGTTGCTGCCTACAGAAA
GGAAAGGACCAGTCCTGACTATGGTCGAAGACGTAGCCCAAGTCCTTACAAGAAATCAAGACGT
GGCAGTCCCGAGTATGGTCGTGACCGCAGAGGCAATGATAGCCCTCGCAGGAGGGAGAGAGTCG
CAAGCCCTACTAAGTACAGCCGCAGTCCCAACAACAAGAGAGAGAGGATGAGCCCTAATCACAG
CCCGTTCAAGAAGGAGAGTCCGAGAAATGGGGTTGGTGAAGTTGAAAGTCCCATTGAAAGGAGA
GAGAGATCGAGGTCTAGCCCCGAGAATGGCCAAGTTGAAAGCCCTGGGTCAATAGGAAGAAGAG
ACAGTGATGGTGGGTATGATGGTGCAGAGAGCCCAATGCAGAAGAG
						
					

						Genomic sequence
						
							TAAGCTGATGGATAAGGTGATCTCGGTGGAGTATGCTGTGAAGGATGATGATGCTAGAGGAAAT
GGACACAGTCCTGAAAGACGCCGTGATAGGTCACCTGAAAGGAGAAGGCGATCACCTAGTCCTT
ACAAAAGAGAAAGAGGAAGCCCTGATTATGGCCGAGGAGCTAGTCCTGTTGCTGCCTACAGAAA
GGAAAGGACCAGTCCTGACTATGGTCGAAGACGTAGCCCAAGTCCTTACAAGAAATCAAGACGT
GGCAGTCCCGAGTATGGTCGTGACCGCAGAGGCAATGATAGCCCTCGCAGGAGGGAGAGAGTCG
CAAGCCCTACTAAGTACAGCCGCAGTCCCAACAACAAGAGAGAGAGGATGAGCCCTAATCACAG
CCCGTTCAAGAAGGAGAGTCCGAGAAATGGGGTTGGTGAAGTTGAAAGTCCCATTGAAAGGAGA
GAGAGATCGAGGTCTAGCCCCGAGAATGGCCAAGTTGAAAGCCCTGGGTCAATAGGAAGAAGAG
ACAGTGATGGTGGGTATGATGGTGCAGAGAGCCCAATGCAGAAGAG
						
					

			
		

Sequences
Splice junction sequence	GGTCTAGCCCCGAGAATGGCCAAGTTGAAAGCCCTGGGTCAATAGGAAGAAGAGACAGTGATGG TGGGTATGATGGTGCAGAGAGCCCAATGCAGAAGAGtaagctgatggataaggtgatctcggtg gagtatgctgtgaaggatgatgatgctagaggaaatggacacagtcctgaaagacgccgtgata ggtcacct
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 167 Transcript exons: 13026572-13026658,13027050-13027129 TAAGCTGATGGATAAGGTGATCTCGGTGGAGTATGCTGTGAAGGATGATGATGCTAGAGGAAAT GGACACAGTCCTGAAAGACGCCGCAAGTTGAAAGCCCTGGGTCAATAGGAAGAAGAGACAGTGA TGGTGGGTATGATGGTGCAGAGAGCCCAATGCAGAAGAG Transcript length: 215 Transcript exons: 13026572-13026720,13027064-13027129 TAAGCTGATGGATAAGGTGATCTCGGTGGAGTATGCTGTGAAGGATGATGATGCTAGAGGAAAT GGACACAGTCCTGAAAGACGCCGTGATAGGTCACCTGAAAGGAGAAGGCGATCACCTAGTCCTT ACAAAAGAGAAAGAGGAAGCCTGGGTCAATAGGAAGAAGAGACAGTGATGGTGGGTATGATGGT GCAGAGAGCCCAATGCAGAAGAG Transcript length: 227 Transcript exons: 13026572-13026636,13026968-13027129 TAAGCTGATGGATAAGGTGATCTCGGTGGAGTATGCTGTGAAGGATGATGATGCTAGAGGAAAT GGGAGAGTCCGAGAAATGGGGTTGGTGAAGTTGAAAGTCCCATTGAAAGGAGAGAGAGATCGAG GTCTAGCCCCGAGAATGGCCAAGTTGAAAGCCCTGGGTCAATAGGAAGAAGAGACAGTGATGGT GGGTATGATGGTGCAGAGAGCCCAATGCAGAAGAG Transcript length: 241 Transcript exons: 13026572-13026631,13026936-13027055,13027069-13027129 TAAGCTGATGGATAAGGTGATCTCGGTGGAGTATGCTGTGAAGGATGATGATGCTAGAGGAGGA TGAGCCCTAATCACAGCCCGTTCAAGAAGGAGAGTCCGAGAAATGGGGTTGGTGAAGTTGAAAG TCCCATTGAAAGGAGAGAGAGATCGAGGTCTAGCCCCGAGAATGGCCAAGTTCAATAGGAAGAA GAGACAGTGATGGTGGGTATGATGGTGCAGAGAGCCCAATGCAGAAGAG Transcript length: 242 Transcript exons: 13026572-13026770,13027087-13027129 TAAGCTGATGGATAAGGTGATCTCGGTGGAGTATGCTGTGAAGGATGATGATGCTAGAGGAAAT GGACACAGTCCTGAAAGACGCCGTGATAGGTCACCTGAAAGGAGAAGGCGATCACCTAGTCCTT ACAAAAGAGAAAGAGGAAGCCCTGATTATGGCCGAGGAGCTAGTCCTGTTGCTGCCTACAGAAA GGAAAGGGTGATGGTGGGTATGATGGTGCAGAGAGCCCAATGCAGAAGAG Transcript length: 246 Transcript exons: 13026572-13026660,13026973-13027129 TAAGCTGATGGATAAGGTGATCTCGGTGGAGTATGCTGTGAAGGATGATGATGCTAGAGGAAAT GGACACAGTCCTGAAAGACGCCGTGGTCCGAGAAATGGGGTTGGTGAAGTTGAAAGTCCCATTG AAAGGAGAGAGAGATCGAGGTCTAGCCCCGAGAATGGCCAAGTTGAAAGCCCTGGGTCAATAGG AAGAAGAGACAGTGATGGTGGGTATGATGGTGCAGAGAGCCCAATGCAGAAGAG Transcript length: 273 Transcript exons: 13026572-13026657,13026943-13027129 TAAGCTGATGGATAAGGTGATCTCGGTGGAGTATGCTGTGAAGGATGATGATGCTAGAGGAAAT GGACACAGTCCTGAAAGACGCCGCCCTAATCACAGCCCGTTCAAGAAGGAGAGTCCGAGAAATG GGGTTGGTGAAGTTGAAAGTCCCATTGAAAGGAGAGAGAGATCGAGGTCTAGCCCCGAGAATGG CCAAGTTGAAAGCCCTGGGTCAATAGGAAGAAGAGACAGTGATGGTGGGTATGATGGTGCAGAG AGCCCAATGCAGAAGAG Transcript length: 278 Transcript exons: 13026572-13026736,13027017-13027129 TAAGCTGATGGATAAGGTGATCTCGGTGGAGTATGCTGTGAAGGATGATGATGCTAGAGGAAAT GGACACAGTCCTGAAAGACGCCGTGATAGGTCACCTGAAAGGAGAAGGCGATCACCTAGTCCTT ACAAAAGAGAAAGAGGAAGCCCTGATTATGGCCGAGGAGAGAGAGATCGAGGTCTAGCCCCGAG AATGGCCAAGTTGAAAGCCCTGGGTCAATAGGAAGAAGAGACAGTGATGGTGGGTATGATGGTG CAGAGAGCCCAATGCAGAAGAG Transcript length: 315 Transcript exons: 13026572-13026715,13026916-13027016,13027060-13027129 TAAGCTGATGGATAAGGTGATCTCGGTGGAGTATGCTGTGAAGGATGATGATGCTAGAGGAAAT GGACACAGTCCTGAAAGACGCCGTGATAGGTCACCTGAAAGGAGAAGGCGATCACCTAGTCCTT ACAAAAGAGAAAGAGGGTCCCAACAACAAGAGAGAGAGGATGAGCCCTAATCACAGCCCGTTCA AGAAGGAGAGTCCGAGAAATGGGGTTGGTGAAGTTGAAAGTCCCATTGAAAGGGCCCTGGGTCA ATAGGAAGAAGAGACAGTGATGGTGGGTATGATGGTGCAGAGAGCCCAATGCAGAAGAG Transcript length: 355 Transcript exons: 13026572-13026769,13026969-13027069,13027074-13027129 TAAGCTGATGGATAAGGTGATCTCGGTGGAGTATGCTGTGAAGGATGATGATGCTAGAGGAAAT GGACACAGTCCTGAAAGACGCCGTGATAGGTCACCTGAAAGGAGAAGGCGATCACCTAGTCCTT ACAAAAGAGAAAGAGGAAGCCCTGATTATGGCCGAGGAGCTAGTCCTGTTGCTGCCTACAGAAA GGAAAGGAGAGTCCGAGAAATGGGGTTGGTGAAGTTGAAAGTCCCATTGAAAGGAGAGAGAGAT CGAGGTCTAGCCCCGAGAATGGCCAAGTTGAAAGCCCTGGGTCGGAAGAAGAGACAGTGATGGT GGGTATGATGGTGCAGAGAGCCCAATGCAGAAGAG Transcript length: 558 Transcript exons: 13026572-13027129 TAAGCTGATGGATAAGGTGATCTCGGTGGAGTATGCTGTGAAGGATGATGATGCTAGAGGAAAT GGACACAGTCCTGAAAGACGCCGTGATAGGTCACCTGAAAGGAGAAGGCGATCACCTAGTCCTT ACAAAAGAGAAAGAGGAAGCCCTGATTATGGCCGAGGAGCTAGTCCTGTTGCTGCCTACAGAAA GGAAAGGACCAGTCCTGACTATGGTCGAAGACGTAGCCCAAGTCCTTACAAGAAATCAAGACGT GGCAGTCCCGAGTATGGTCGTGACCGCAGAGGCAATGATAGCCCTCGCAGGAGGGAGAGAGTCG CAAGCCCTACTAAGTACAGCCGCAGTCCCAACAACAAGAGAGAGAGGATGAGCCCTAATCACAG CCCGTTCAAGAAGGAGAGTCCGAGAAATGGGGTTGGTGAAGTTGAAAGTCCCATTGAAAGGAGA GAGAGATCGAGGTCTAGCCCCGAGAATGGCCAAGTTGAAAGCCCTGGGTCAATAGGAAGAAGAG ACAGTGATGGTGGGTATGATGGTGCAGAGAGCCCAATGCAGAAGAG
Genomic sequence	TAAGCTGATGGATAAGGTGATCTCGGTGGAGTATGCTGTGAAGGATGATGATGCTAGAGGAAAT GGACACAGTCCTGAAAGACGCCGTGATAGGTCACCTGAAAGGAGAAGGCGATCACCTAGTCCTT ACAAAAGAGAAAGAGGAAGCCCTGATTATGGCCGAGGAGCTAGTCCTGTTGCTGCCTACAGAAA GGAAAGGACCAGTCCTGACTATGGTCGAAGACGTAGCCCAAGTCCTTACAAGAAATCAAGACGT GGCAGTCCCGAGTATGGTCGTGACCGCAGAGGCAATGATAGCCCTCGCAGGAGGGAGAGAGTCG CAAGCCCTACTAAGTACAGCCGCAGTCCCAACAACAAGAGAGAGAGGATGAGCCCTAATCACAG CCCGTTCAAGAAGGAGAGTCCGAGAAATGGGGTTGGTGAAGTTGAAAGTCCCATTGAAAGGAGA GAGAGATCGAGGTCTAGCCCCGAGAATGGCCAAGTTGAAAGCCCTGGGTCAATAGGAAGAAGAG ACAGTGATGGTGGGTATGATGGTGCAGAGAGCCCAATGCAGAAGAG

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.86272871

Conservation Information
Conserved circRNAs	NA
PMCS	0.86272871

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							13026579-13027126(+)
						
						Potential amino acid sequence
						
							MDKVISVEYAVKDDDARGNGHSPERRRDRSPERRRRSPSPYKRERGSPDYGRGASPVAAYRKER
TSPDYGRRRSPSPYKKSRRGSPEYGRDRRGNDSPRRRERVASPTKYSRSPNNKRERMSPNHSPF
KKESPRNGVGEVESPIERRERSRSSPENGQVESPGSIGRRDSDGGYDGAESPMQKSKLMDKVIS
VEYAVKDDDARGNGHSPERRRDRSPERRRRSPSPYKRERGSPDYGRGASPVAAYRKERTSPDYG
RRRSPSPYKKSRRGSPEYGRDRRGNDSPRRRERVASPTKYSRSPNNKRERMSPNHSPFKKESPR
NGVGEVESPIERRERSRSSPENGQVESPGSIGRRDSDGGYDGAESPMQKSKLMDKVISVEYAVK
DDDARGNGHSPERRRDRSPERRRRSPSPYKRERGSPDYGRGASPVAAYRKERTSPDYGRRRSPS
PYKKSRRGSPEYGRDRRGNDSPRRRERVASPTKYSRSPNNKRERMSPNHSPFKKESPRNGVGEV
ESPIERRERSRSSPENGQVESPGSIGRRDSDGGYDGAESPMQKSKLMDKVISVEYAVKDDDARG
NGHSPERRRDRSPERRRRSPSPYKRERGSPDYGRGASPVAAYRKERTSPDYGRRRSPSPYKKSR
RGSPEYGRDRRGNDSPRRRERVASPTKYSRSPNNKRERMSPNHSPFKKESPRNGVGEVESPIER
RERSRSSPENGQVESPGSIGRRDSDGGYDGAESPMQK(+)
						
						Sponge-miRNAs
						
							ath-miR472-5p 						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	Y
Potential coding position	13026579-13027126(+)
Potential amino acid sequence	MDKVISVEYAVKDDDARGNGHSPERRRDRSPERRRRSPSPYKRERGSPDYGRGASPVAAYRKER TSPDYGRRRSPSPYKKSRRGSPEYGRDRRGNDSPRRRERVASPTKYSRSPNNKRERMSPNHSPF KKESPRNGVGEVESPIERRERSRSSPENGQVESPGSIGRRDSDGGYDGAESPMQKSKLMDKVIS VEYAVKDDDARGNGHSPERRRDRSPERRRRSPSPYKRERGSPDYGRGASPVAAYRKERTSPDYG RRRSPSPYKKSRRGSPEYGRDRRGNDSPRRRERVASPTKYSRSPNNKRERMSPNHSPFKKESPR NGVGEVESPIERRERSRSSPENGQVESPGSIGRRDSDGGYDGAESPMQKSKLMDKVISVEYAVK DDDARGNGHSPERRRDRSPERRRRSPSPYKRERGSPDYGRGASPVAAYRKERTSPDYGRRRSPS PYKKSRRGSPEYGRDRRGNDSPRRRERVASPTKYSRSPNNKRERMSPNHSPFKKESPRNGVGEV ESPIERRERSRSSPENGQVESPGSIGRRDSDGGYDGAESPMQKSKLMDKVISVEYAVKDDDARG NGHSPERRRDRSPERRRRSPSPYKRERGSPDYGRGASPVAAYRKERTSPDYGRRRSPSPYKKSR RGSPEYGRDRRGNDSPRRRERVASPTKYSRSPNNKRERMSPNHSPFKKESPRNGVGEVESPIER RERSRSSPENGQVESPGSIGRRDSDGGYDGAESPMQK(+)
Sponge-miRNAs	ath-miR472-5p
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Ye et al., 2015;Chu et al., 2017;Pan et al., 2017;Chen et al., 2017a;Liu et al., 2017;Zhang et al., 2019

circRNA

Detail information of AT4G25500_circ_g.6

Address

Any questions?

Supported by