Detailed infomation of each circRNA
General Information | |
---|---|
CircRNA Name | AT1G06240_circ_g.2 |
ID in PlantcircBase | ath_circ_000959 |
Alias | 1:1911969-1912701 |
Organism | Arabidpsis thaliana |
Position | chr1: 1911969-1912701 JBrowse» |
Reference genome | TAIR10.38 |
Type | e-circRNA |
Identification method | find_circ; CIRI2 |
Parent gene | AT1G06240 |
Parent gene annotation |
Putative uncharacterized protein At1g06240 |
Parent gene strand | + |
Alternative splicing | AT1G06240_circ_g.1 |
Support reads | 2/2/2 |
Tissues | root;leaf;flower |
Exon boundary | Yes-Yes |
Splicing signals | GT-AG |
Number of exons covered | AT1G06240.1:4 |
Conservation Information | |
---|---|
Conserved circRNAs | NA |
PMCS | 0.159011847 |
Functional Information | |
---|---|
Coding potential | NA |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
---|---|
References | Philips et al., 2020 |