Detailed infomation of each circRNA
General Information | |
---|---|
CircRNA Name | AT1G12840_circ_g.1 |
ID in PlantcircBase | ath_circ_002303 |
Alias | NA |
Organism | Arabidpsis thaliana |
Position | chr1: 4374594-4374692 JBrowse» |
Reference genome | TAIR10.38 |
Type | u-circRNA |
Identification method | circRNA_finder |
Parent gene | AT1G12840 |
Parent gene annotation |
V-type proton ATPase subunit C |
Parent gene strand | + |
Alternative splicing | AT1G12840_circ_g.2 AT1G12840_circ_g.3 |
Support reads | 2 |
Tissues | aerial |
Exon boundary | No-No |
Splicing signals | CT-AC |
Number of exons covered | AT1G12830.1:1 AT1G12840.1:1 AT1G12830.1:1 |
Conservation Information | |
---|---|
Conserved circRNAs | NA |
PMCS | 0.375146552 |
Functional Information | |
---|---|
Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
---|---|
References | Chu et al., 2017 |