Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d045435_circ_g.2 |
ID in PlantcircBase | zma_circ_005825 |
Alias | cold_test_circ_005581 |
Organism | Zea mays |
Position | chr9: 22150469-22150837 JBrowse» |
Reference genome | AGPv4.38 |
Type | u-circRNA |
Identification method | find_circ |
Parent gene | Zm00001d045435 |
Parent gene annotation |
glycine-rich protein |
Parent gene strand | + |
Alternative splicing | NA |
Support reads | NA |
Tissues | seedling |
Exon boundary | No-Yes |
Splicing signals | GT-AA |
Number of exons covered | Zm00001d045435_T004:2 Zm00001d045435_T009:2 Zm00001d045435_T002:2 Zm00001d045435_T006:2 Zm00001d045435_T001:2 Zm00001d045435_T007:2 Zm00001d045435_T008:2 Zm00001d045435_T003:2 Zm00001d045435_T011:1 Zm00001d045435_T005:1 Zm00001d045435_T010:1 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.041787737 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Tang et al., 2018 |