Plant Circular RNA Database

Detail information of Zm00001d004707_circ_g.5

			
						 General Information
					
						CircRNA Name
						Zm00001d004707_circ_g.5
					
						ID in PlantcircBase
						zma_circ_007271
					
						Alias
						zma_circ_0000794
					
						Organism
						
							Zea mays						
					
						Position
						
							chr2: 132443865-132448281  JBrowse»						
					
						Reference genome
						
							AGPv4.38						
					
						Type  
						
							ue-circRNA							
									
						Identification method
						find_circ
					
						Parent gene
						
							Zm00001d004707						
					
						Parent gene annotation
						
							 thylakoid assembly1
							
						Parent gene strand
						-
					
						Alternative splicing
						
							Zm00001d004707_circ_g.1 Zm00001d004707_circ_g.2 Zm00001d004707_circ_g.3 Zm00001d004707_circ_g.4 						
					
						Support reads
						NA
					
						Tissues
						leaf, root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Zm00001d004707_T004:2
Zm00001d004707_T002:3
Zm00001d004707_T014:2
Zm00001d004707_T012:3
Zm00001d004707_T005:3
Zm00001d004707_T010:2
Zm00001d004707_T001:3
Zm00001d004707_T015:2
Zm00001d004707_T003:2

General Information
CircRNA Name	Zm00001d004707_circ_g.5
ID in PlantcircBase	zma_circ_007271
Alias	zma_circ_0000794
Organism	Zea mays
Position	chr2: 132443865-132448281 JBrowse»
Reference genome	AGPv4.38
Type	ue-circRNA
Identification method	find_circ
Parent gene	Zm00001d004707
Parent gene annotation	thylakoid assembly1
Parent gene strand	-
Alternative splicing	Zm00001d004707_circ_g.1 Zm00001d004707_circ_g.2 Zm00001d004707_circ_g.3 Zm00001d004707_circ_g.4
Support reads	NA
Tissues	leaf, root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Zm00001d004707_T004:2 Zm00001d004707_T002:3 Zm00001d004707_T014:2 Zm00001d004707_T012:3 Zm00001d004707_T005:3 Zm00001d004707_T010:2 Zm00001d004707_T001:3 Zm00001d004707_T015:2 Zm00001d004707_T003:2

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							AAAACAGAATTCACCTTGTAGTTCCAACTAAAACAGGGCGACCTAATTGGAACATAGACTCTAC
TTCAGCCCGTACATATTGCCATTTGCCTCTTGCAGTttttggattaccacctaaaataatgtca
gttcctctgccagccatattagtagatattgtaatagcatgttttcttccagcttgggcaatta
tttcggct

									
								

					

						Assembled circRNA sequence  
						
							NA
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							NA						
					

						Genomic sequence
						
							TTTTGGATTACCACCTAAAATAATGTCAGTTCCTCTGCCAGCCATATTAGTAGATATTGTAATA
GCATGTTTTCTTCCAGCTTGGGCAATTATTTCGGCTTCTCTTGCAGCATACTGTCAGGAATAAG
GCAATTAGCTTTATCCATGGAAAAGAACAAGACAAGTTAAACTAAAGCAAACTTTTTACAAACC
TTTGGCCTTGCATTAAGGACATTGTGTGGAATCTTGTGAACTTTAAGTAGCTCTGACAAGTATT
CAGAACTCTCGACACTGAAAAAAGATATAGACACCATTTATTTAGACAGCTGTATGAAAAGCAT
CCCAAGACAGTAAAGGGCAGACCAATACTGAAAGCTCACACACAAGGTGAGGTTTGGGGAAGGA
AATTTCTAGGCAGCCCTACCTTTAATTATTATGCGAGGAGGATTCCAACCCACACAAGGTGAGG
TTTGGGGAAGGAAATTTCTACGCAGCCCTACTTTTAGTTATTATGCGAGGATGAATCCAGCCCA
CACAAGATGAGGTTTATACAGAATTCAGAACTGCATGTGCAAAATATGGAACCAGAGGGCATCT
GCATTGCTCCTTTCTCTCACTTCACTAGTTGGGTCATGATAACTATTAGATTTGTTAAGGCCCA
TATGGCCCATATTACATGTGCCTATATATTCTACCAAGTCCTAAGGACTAATTGTACTCTCTCT
AATCCAAGATTAGTAACATAATACCAGAGCAAAGCTAGGGTTAGGGTTAATCCACCTTTCTGAT
CCTCTTTTTTCCCTAGCCGACAGTCTTCCCCAATCCGATCGCCACCGCCATCGTGGCTCCCTAT
CCACGCCGCCGTCAGATCACGTCTTCTCCTCGTTTTCGCACCGCACCACGCTCGTCGTCCTAGT
CGTGTCTACCCTTGCGGGATCTCGTCTGCTTCCGGCCGTCGGCTCTAGGCACACTCGGCCGCTC
CCGGGTGTCACGGCTCGTCAGCTCCGTGTCTGTCGTCACTGACAGATCTAGGCGCACTCGTCGG
TTCCGTGCCCGCGGATCCAAGCCTCTGTTCTCATCGTCGCCGCGACTGCACCTGCTGCTGCTGG
ATTCCACCAATACAGGTCGTCGTTGTGGCTCGCCTCCATCCAGTCCCCGCCGCGGCTACACCTG
CTTGCTCCTGTTGTGTCATCCCCTTCGCCGCCAGATCGTGGTCGGCTAATGGTCCCCTTCGTTG
CCAGTGCAGATTGTGGTCCCATTCGCTACCAGTGCATATCGTGGTCCCTTCGTCGCCGGTGCAG
ATCGTGGTCGTGGATTCATCTGGATCGTGGAGTTCAGCGTTGTTCCACCAGTCCTCCTGCTACA
ACTTTGGACAGAGGATAAAGTTTGGGAAGGAGGATCAGGTCATCTCTTCTCTGGTTACTCTATG
TTGTGGACTCATTCTTCTACAGGAACATTTATGGGCGCAAGCACAAGAAGGAAACCTCCACCAA
TAAGGCAACCGAGCTAGAAGAATAGGAAAGGAAGCAGCAAGCTCAGGCAACCGGGCTGGAAGCA
AGGAAAGGGGAATCAGGCGAGTCCTATTCCAGTTATATCAATCAAGTAGTTTCCTATTGCTGCT
ATAGCAGACAGTAGAGTTTCCTATTTCTTTTATAGAAAGTAATAAGGCCCTGTTTGTTTCTTCC
ATGATTATATAATCCAACTTATGGATTATATAAGCACCTATTAACCTGCTTATGGATTATTATA
ATCTAGCTGTTTAGATTACATAATCTATCTAATAATCTGTGTTGTTTGTTTAACTCTTAGCTTA
TTTAAGCTAGATTATATAATCTAGAGGTTAAACAAACAGGGCCTAAGTTGATTGGATATGTTCC
CTGCCACCTATACTATAAAGGTTGGCTGCTAGTTTGTAAAAGGGCATCGAAGAATAATATAGTG
ACCTCCTAGAGGTGGGCTGTTCTTCGACGGTGGCGCCTTCAGCCGCCGGAGACGACAGTCCTCC
TCGCTACATTTTGTGTTCCTGTTCTCAACCTTCTCTTCTCCTCCACTCTCCCCTGTATTCCCCT
CGCCGACCACGACGCAGTAGGCACAACAAATTGGTATCGGAGACAAGTTCCCCGACCATGTCCA
GCGTCGCGGGCGGTCCTGAGCCTGATTCACTGAATCTGGACCACATCATCGCGCAGCTCACAAC
CATGAACAACCGCCTGAACGCGCATGACCAGCGCATCGCGCGCACGGAGAAGTTTCAATCCGGT
GATGAAGAGAACCACGAGCAGCAGGGTTCGCCTGATCGCCGACGACACGGAGGAAGGTAGCTTC
AGTGGGGGCCGCGAGAATGGCCCTCGACGTTATGACAGCAGCGACCCACGAGAACCCCACCTCA
ACTTCCCGCACTACGATGGTGAGTCGGATCCGCTCCCATGGTTGAACAAGTGTGAAGGGTTTTT
CCGCGGATATCGCATGCTACAGGAGGATAAGGTGTGGCTGGCCTCTCTCCATCTTGACGGCATG
GCGGCGCAATGGTACTACCAGTTGGAGCGTGATCTCAGCATCATCACTTGTCCACGCTTCGTCA
AATTCACCAACATGCGCTCAGCCCGCCCATCCGCTCCAACGCGCTTGGGGAGTTGAAGGAGCTC
CGCCGCACCGGCACGGTGGAGGAATACCCGCGCCAGTTCTTGGCACTCCTCTGCCTGCGACAAC
CTCACCCGGCAGCACCAAATTGACTTGTTCACTGCCGGGTTGGGTCAGCCCTTGTCATCCGACG
TCGAGATGCAACACCCGGCGAACCTTTAGACGGCCATGAGTCTGGCCTGGGCCTTCGAGCGTCA
TTCTGCTGAGGCGGCTCGCGCCATCTACTCGTCCACGCCGCGCCAGCCTTCCCGTCCTCGTCCA
CCGTCAACGACACCAGCACTGACGATGGAGTACGAGGCCTCATAAGCTAGTGCCACACTCCACT
CGTTGTCATTTCCTCGGGTACTCCTCCGATCACAAGGGGTACCGATGCCTTGATCTCACCACCT
ATTGTGTGATCGTATCCCACCACATTGTGTTTTACGAAGCCACCTTCCCTCCTGTCGACCTGTC
ACCCCTCAAGACCTCAACACACTCCTGGATACCGACCTTGTGGATGTCCCTCGTCTTCCTTTAC
CTACTGGTCTGTCTCCGCCGCACCCACTGTAATCCCATCGACGCTGTCCGCGCCACGTGCAGCC
TCGTCGCCTCCGACGGCGCCACACGCGGGCTCATCGTAGAATTCCATCCGTAGGGCCTCTTTCT
CCATCAGCGGCAGTATACCCTCGACATCCTAGAGCGAGCTGGCATGTCCAGCTGCAAGTCTTAC
TCCACGCCAATCAACACCCAGGCGAAGGTCTCCGACGACGTTGACACCCCGATCAACGACATGA
CAACTACTGGAGCCTTGCCAGGGCCCTCCAGTACCTCATCTTCACCATGCCTGACATCGCCTAC
GTTGTTCAGCAGATGTCCTCCACATGCACACTTAGCAGGAGCCGCACCTCACCGCTTCAAAGCG
GATCCTTTGTTACCTCTGTGCCACCCTCGACCACGGCCTTCTTCTTCGGCCCTCTCCGACCTCC
GAGCTGGTCTACACAGACGTCGACTGGGCGAGTTGTCCCGACACTCGCTAGTCCACTCATGTTA
CGTCGTGTTCCTGGATGCCAACCCGGTCTCCTGATCTTTGAAGTGACAGCCCGTTGTCTCCCGC
TCCAGCGCTAAGGCCGAGTACCGCATCGTGGCCAATGGCGTGGTAGAGGCATCCTGACTCCATC
GGTTGTTCCAGGGGCTTCACAGCCCTTTTGCTCACGCCACACTCATCTACTGCGACAATGTCAA
CGCGGTCTACCTCTCAACCAATCTTGTGCTGCATCAGCGCACGAAGCAAGTGGAGATCGACCTC
CACTTTGTTTGTGAGCGTGTTGCTGTTAGCGATGTCTACATCCTCGTGTCCCTACCACCTCCTA
GTTTGCCAATATCTTTACCAAAGGCCTCCCTTCGACGCTGTTCTCAGAGTTTCGGTCCAGTCTC
AACATCTGTAGTGACTAGGGTCGCGACTACGGGGGGTGTTAGATTATGTGTTTGAGTTGTAATG
GGCCTTAGTCCAGCCCATGTACTTAGCTATTTATTTATACAACACCTACCTAGTAAGGGTTAGG
TTTTTTCCTTAAACCTTTCAATCAATAACAATAAACCACCCTATGGCTTTACCAACAGGTTTTC
ATCCTATGAAAACATCTATAAACCAAATTTTATCTCCTAGCATCATACTACCAAATTAAACATA
TCAAAATCAGTATTAACTATTAAAACAAAAAAACAGAATTCACCTTGTAGTTCCAACTAAAACA
GGGCGACCTAATTGGAACATAGACTCTACTTCAGCCCGTACATATTGCCATTTGCCTCTTGCAG
T
						
					

			
		

Sequences
Splice junction sequence	AAAACAGAATTCACCTTGTAGTTCCAACTAAAACAGGGCGACCTAATTGGAACATAGACTCTAC TTCAGCCCGTACATATTGCCATTTGCCTCTTGCAGTttttggattaccacctaaaataatgtca gttcctctgccagccatattagtagatattgtaatagcatgttttcttccagcttgggcaatta tttcggct
Assembled circRNA sequence	NA The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	NA
Genomic sequence	TTTTGGATTACCACCTAAAATAATGTCAGTTCCTCTGCCAGCCATATTAGTAGATATTGTAATA GCATGTTTTCTTCCAGCTTGGGCAATTATTTCGGCTTCTCTTGCAGCATACTGTCAGGAATAAG GCAATTAGCTTTATCCATGGAAAAGAACAAGACAAGTTAAACTAAAGCAAACTTTTTACAAACC TTTGGCCTTGCATTAAGGACATTGTGTGGAATCTTGTGAACTTTAAGTAGCTCTGACAAGTATT CAGAACTCTCGACACTGAAAAAAGATATAGACACCATTTATTTAGACAGCTGTATGAAAAGCAT CCCAAGACAGTAAAGGGCAGACCAATACTGAAAGCTCACACACAAGGTGAGGTTTGGGGAAGGA AATTTCTAGGCAGCCCTACCTTTAATTATTATGCGAGGAGGATTCCAACCCACACAAGGTGAGG TTTGGGGAAGGAAATTTCTACGCAGCCCTACTTTTAGTTATTATGCGAGGATGAATCCAGCCCA CACAAGATGAGGTTTATACAGAATTCAGAACTGCATGTGCAAAATATGGAACCAGAGGGCATCT GCATTGCTCCTTTCTCTCACTTCACTAGTTGGGTCATGATAACTATTAGATTTGTTAAGGCCCA TATGGCCCATATTACATGTGCCTATATATTCTACCAAGTCCTAAGGACTAATTGTACTCTCTCT AATCCAAGATTAGTAACATAATACCAGAGCAAAGCTAGGGTTAGGGTTAATCCACCTTTCTGAT CCTCTTTTTTCCCTAGCCGACAGTCTTCCCCAATCCGATCGCCACCGCCATCGTGGCTCCCTAT CCACGCCGCCGTCAGATCACGTCTTCTCCTCGTTTTCGCACCGCACCACGCTCGTCGTCCTAGT CGTGTCTACCCTTGCGGGATCTCGTCTGCTTCCGGCCGTCGGCTCTAGGCACACTCGGCCGCTC CCGGGTGTCACGGCTCGTCAGCTCCGTGTCTGTCGTCACTGACAGATCTAGGCGCACTCGTCGG TTCCGTGCCCGCGGATCCAAGCCTCTGTTCTCATCGTCGCCGCGACTGCACCTGCTGCTGCTGG ATTCCACCAATACAGGTCGTCGTTGTGGCTCGCCTCCATCCAGTCCCCGCCGCGGCTACACCTG CTTGCTCCTGTTGTGTCATCCCCTTCGCCGCCAGATCGTGGTCGGCTAATGGTCCCCTTCGTTG CCAGTGCAGATTGTGGTCCCATTCGCTACCAGTGCATATCGTGGTCCCTTCGTCGCCGGTGCAG ATCGTGGTCGTGGATTCATCTGGATCGTGGAGTTCAGCGTTGTTCCACCAGTCCTCCTGCTACA ACTTTGGACAGAGGATAAAGTTTGGGAAGGAGGATCAGGTCATCTCTTCTCTGGTTACTCTATG TTGTGGACTCATTCTTCTACAGGAACATTTATGGGCGCAAGCACAAGAAGGAAACCTCCACCAA TAAGGCAACCGAGCTAGAAGAATAGGAAAGGAAGCAGCAAGCTCAGGCAACCGGGCTGGAAGCA AGGAAAGGGGAATCAGGCGAGTCCTATTCCAGTTATATCAATCAAGTAGTTTCCTATTGCTGCT ATAGCAGACAGTAGAGTTTCCTATTTCTTTTATAGAAAGTAATAAGGCCCTGTTTGTTTCTTCC ATGATTATATAATCCAACTTATGGATTATATAAGCACCTATTAACCTGCTTATGGATTATTATA ATCTAGCTGTTTAGATTACATAATCTATCTAATAATCTGTGTTGTTTGTTTAACTCTTAGCTTA TTTAAGCTAGATTATATAATCTAGAGGTTAAACAAACAGGGCCTAAGTTGATTGGATATGTTCC CTGCCACCTATACTATAAAGGTTGGCTGCTAGTTTGTAAAAGGGCATCGAAGAATAATATAGTG ACCTCCTAGAGGTGGGCTGTTCTTCGACGGTGGCGCCTTCAGCCGCCGGAGACGACAGTCCTCC TCGCTACATTTTGTGTTCCTGTTCTCAACCTTCTCTTCTCCTCCACTCTCCCCTGTATTCCCCT CGCCGACCACGACGCAGTAGGCACAACAAATTGGTATCGGAGACAAGTTCCCCGACCATGTCCA GCGTCGCGGGCGGTCCTGAGCCTGATTCACTGAATCTGGACCACATCATCGCGCAGCTCACAAC CATGAACAACCGCCTGAACGCGCATGACCAGCGCATCGCGCGCACGGAGAAGTTTCAATCCGGT GATGAAGAGAACCACGAGCAGCAGGGTTCGCCTGATCGCCGACGACACGGAGGAAGGTAGCTTC AGTGGGGGCCGCGAGAATGGCCCTCGACGTTATGACAGCAGCGACCCACGAGAACCCCACCTCA ACTTCCCGCACTACGATGGTGAGTCGGATCCGCTCCCATGGTTGAACAAGTGTGAAGGGTTTTT CCGCGGATATCGCATGCTACAGGAGGATAAGGTGTGGCTGGCCTCTCTCCATCTTGACGGCATG GCGGCGCAATGGTACTACCAGTTGGAGCGTGATCTCAGCATCATCACTTGTCCACGCTTCGTCA AATTCACCAACATGCGCTCAGCCCGCCCATCCGCTCCAACGCGCTTGGGGAGTTGAAGGAGCTC CGCCGCACCGGCACGGTGGAGGAATACCCGCGCCAGTTCTTGGCACTCCTCTGCCTGCGACAAC CTCACCCGGCAGCACCAAATTGACTTGTTCACTGCCGGGTTGGGTCAGCCCTTGTCATCCGACG TCGAGATGCAACACCCGGCGAACCTTTAGACGGCCATGAGTCTGGCCTGGGCCTTCGAGCGTCA TTCTGCTGAGGCGGCTCGCGCCATCTACTCGTCCACGCCGCGCCAGCCTTCCCGTCCTCGTCCA CCGTCAACGACACCAGCACTGACGATGGAGTACGAGGCCTCATAAGCTAGTGCCACACTCCACT CGTTGTCATTTCCTCGGGTACTCCTCCGATCACAAGGGGTACCGATGCCTTGATCTCACCACCT ATTGTGTGATCGTATCCCACCACATTGTGTTTTACGAAGCCACCTTCCCTCCTGTCGACCTGTC ACCCCTCAAGACCTCAACACACTCCTGGATACCGACCTTGTGGATGTCCCTCGTCTTCCTTTAC CTACTGGTCTGTCTCCGCCGCACCCACTGTAATCCCATCGACGCTGTCCGCGCCACGTGCAGCC TCGTCGCCTCCGACGGCGCCACACGCGGGCTCATCGTAGAATTCCATCCGTAGGGCCTCTTTCT CCATCAGCGGCAGTATACCCTCGACATCCTAGAGCGAGCTGGCATGTCCAGCTGCAAGTCTTAC TCCACGCCAATCAACACCCAGGCGAAGGTCTCCGACGACGTTGACACCCCGATCAACGACATGA CAACTACTGGAGCCTTGCCAGGGCCCTCCAGTACCTCATCTTCACCATGCCTGACATCGCCTAC GTTGTTCAGCAGATGTCCTCCACATGCACACTTAGCAGGAGCCGCACCTCACCGCTTCAAAGCG GATCCTTTGTTACCTCTGTGCCACCCTCGACCACGGCCTTCTTCTTCGGCCCTCTCCGACCTCC GAGCTGGTCTACACAGACGTCGACTGGGCGAGTTGTCCCGACACTCGCTAGTCCACTCATGTTA CGTCGTGTTCCTGGATGCCAACCCGGTCTCCTGATCTTTGAAGTGACAGCCCGTTGTCTCCCGC TCCAGCGCTAAGGCCGAGTACCGCATCGTGGCCAATGGCGTGGTAGAGGCATCCTGACTCCATC GGTTGTTCCAGGGGCTTCACAGCCCTTTTGCTCACGCCACACTCATCTACTGCGACAATGTCAA CGCGGTCTACCTCTCAACCAATCTTGTGCTGCATCAGCGCACGAAGCAAGTGGAGATCGACCTC CACTTTGTTTGTGAGCGTGTTGCTGTTAGCGATGTCTACATCCTCGTGTCCCTACCACCTCCTA GTTTGCCAATATCTTTACCAAAGGCCTCCCTTCGACGCTGTTCTCAGAGTTTCGGTCCAGTCTC AACATCTGTAGTGACTAGGGTCGCGACTACGGGGGGTGTTAGATTATGTGTTTGAGTTGTAATG GGCCTTAGTCCAGCCCATGTACTTAGCTATTTATTTATACAACACCTACCTAGTAAGGGTTAGG TTTTTTCCTTAAACCTTTCAATCAATAACAATAAACCACCCTATGGCTTTACCAACAGGTTTTC ATCCTATGAAAACATCTATAAACCAAATTTTATCTCCTAGCATCATACTACCAAATTAAACATA TCAAAATCAGTATTAACTATTAAAACAAAAAAACAGAATTCACCTTGTAGTTCCAACTAAAACA GGGCGACCTAATTGGAACATAGACTCTACTTCAGCCCGTACATATTGCCATTTGCCTCTTGCAG T

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.029816606

Conservation Information
Conserved circRNAs	NA
PMCS	0.029816606

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							132448238-132443867(-)
						
						Potential amino acid sequence
						
							MFQLGRPVLVGTTSVESSEYLSELLKVHKIPHNVLNARPKYAAREAEIIAQAGRKHAITISTNM
AGRGTDIILGGNPKTARGKWQYVRAEVESMFQLGRPVLVGTTSVESSEYLSELLKVHKIPHNVL
NARPKYAAREAEIIAQAGRKHAITISTNMAGRGTDIILGGNPKTARGKWQYVRAEVESMFQLGR
PVLVGTTSVESSEYLSELLKVHKIPHNVLNARPKYAAREAEIIAQAGRKHAITISTNMAGRGTD
IILGGNPKTARGKWQYVRAEVESMFQLGRPVLVGTTSVESSEYLSELLKVHKIPHNVLNARPKY
AAREAEIIAQAGRKHAITISTNMAGRGTDIILGGNPK(-)
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	Y
Potential coding position	132448238-132443867(-)
Potential amino acid sequence	MFQLGRPVLVGTTSVESSEYLSELLKVHKIPHNVLNARPKYAAREAEIIAQAGRKHAITISTNM AGRGTDIILGGNPKTARGKWQYVRAEVESMFQLGRPVLVGTTSVESSEYLSELLKVHKIPHNVL NARPKYAAREAEIIAQAGRKHAITISTNMAGRGTDIILGGNPKTARGKWQYVRAEVESMFQLGR PVLVGTTSVESSEYLSELLKVHKIPHNVLNARPKYAAREAEIIAQAGRKHAITISTNMAGRGTD IILGGNPKTARGKWQYVRAEVESMFQLGRPVLVGTTSVESSEYLSELLKVHKIPHNVLNARPKY AAREAEIIAQAGRKHAITISTNMAGRGTDIILGGNPK(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Ma et al., 2021b

circRNA

Detail information of Zm00001d004707_circ_g.5

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