Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d039173_circ_g.2 |
ID in PlantcircBase | zma_circ_005366 |
Alias | root_test_circ_002890 |
Organism | Zea mays |
Position | chr6: 171778890-171779343 JBrowse» |
Reference genome | AGPv4.38 |
Type | e-circRNA |
Identification method | find_circ |
Parent gene | Zm00001d039173 |
Parent gene annotation |
hypersensitive induced reaction3 |
Parent gene strand | + |
Alternative splicing | Zm00001d039173_circ_g.1 |
Support reads | NA |
Tissues | root |
Exon boundary | No-No |
Splicing signals | GT-CA |
Number of exons covered | Zm00001d039173_T003:3 Zm00001d039173_T007:3 Zm00001d039173_T006:3 Zm00001d039173_T008:3 Zm00001d039173_T002:3 Zm00001d039173_T001:3 Zm00001d039173_T004:3 Zm00001d039173_T005:3 Zm00001d039173_T009:3 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.022760646 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Tang et al., 2018 |