Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d020180_circ_g.2 |
ID in PlantcircBase | zma_circ_009323 |
Alias | Zm07circ00046, zma_circ_0002394, GRMZM5G843174_C1 |
Organism | Zea mays |
Position | chr7: 97819197-97820040 JBrowse» |
Reference genome | AGPv4.38 |
Type | e-circRNA |
Identification method | CIRI2, find_circ |
Parent gene | Zm00001d020180 |
Parent gene annotation |
Protein SAWADEE HOMEODOMAIN HOMOLOG 1 |
Parent gene strand | + |
Alternative splicing | Zm00001d020180_circ_g.1 |
Support reads | NA |
Tissues | leaf, endosperm, root |
Exon boundary | Yes-Yes |
Splicing signals | GT-AG |
Number of exons covered | Zm00001d020180_T002:4 Zm00001d020180_T001:4 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.107523815 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Han et al., 2020; Ma et al., 2021b;Zhang et al., 2019 |