Plant Circular RNA Database

Detail information of Os01g0772700_circ_g.19

			
						 General Information
					
						CircRNA Name
						Os01g0772700_circ_g.19
					
						ID in PlantcircBase
						osa_circ_004130
					
						Alias
						NA
					
						Organism
						
							Oryza sativa						
					
						Position
						
							chr1: 32642282-32646112  JBrowse»						
					
						Reference genome
						
							IRGSP-1.0.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						CIRCexplorer
					
						Parent gene
						
							Os01g0772700						
					
						Parent gene annotation
						
							Armadillo-type fold domain containing protein. (Os01t0772700-00)
							
						Parent gene strand
						+
					
						Alternative splicing
						
							Os01g0772700_circ_g.18 						
					
						Support reads
						1
					
						Tissues
						root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Os01t0772700-00:6

General Information
CircRNA Name	Os01g0772700_circ_g.19
ID in PlantcircBase	osa_circ_004130
Alias	NA
Organism	Oryza sativa
Position	chr1: 32642282-32646112 JBrowse»
Reference genome	IRGSP-1.0.38
Type	e-circRNA
Identification method	CIRCexplorer
Parent gene	Os01g0772700
Parent gene annotation	Armadillo-type fold domain containing protein. (Os01t0772700-00)
Parent gene strand	+
Alternative splicing	Os01g0772700_circ_g.18
Support reads	1
Tissues	root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Os01t0772700-00:6

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							TGCCATTATATCTAAAAGAAGCTTTAGAGAAGAATGAGTCCCATGGACGGGCTCATTTATTGGC
TTTGCTACCAACCTTTTCTGAGCTTGTTGTCTCAAGgagatctctatgttcaagcacaatctct
gtttaatgatgaaatgtatctaaggctcatggccgttatgcatctgatgattaagagttccatg
aatcctac

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 1069
Transcript exons: 32642282-32642400,32643031-32643232,32643328-32643499,32
644594-32644918,32645680-32645728,32645911-32646112
GAGATCTCTATGTTCAAGCACAATCTCTGTTTAATGATGAAATGTATCTAAGGCTCATGGCCGT
TATGCATCTGATGATTAAGAGTTCCATGAATCCTACAGATTACGATAATGAATTGGGTAGTATC
CCTGCTCTGCAACGAGGTATCTTGGAAATTATTCCTATGCTACGTCCAACAACTATGTTATCTT
CAATGTGGTCACCTCTCCTCCTCGAACTACTGTGCTACCTTAATAGCCATGATACTCCCCTGCA
GAAACAGGGTAAAGAGATGCATGAACAGAAATCTGATGCAGCAAATGGTGCAACACATGGTTTT
CTTGAACGGAGTCATCTCAATAACAGCAGCACAAAAATGGATAATGCAGTGGGCTGTGGCTGGG
GTATTATGTTCATAGAAAAGCTTGTGCCGATTGTTGTCAACCTATTTCTGGAGGCTCCACAGAA
TGAAAGGTTTAATTCCTCTCCGGAAGTTATTCGATGTCTTGGAAGGTGCATGAACACAAGGAGA
GACAATCCAAAGGGTACACTTTGGAGAGTTTCTGCTGAATGCTTCAATCGTGTTTTGGTAGATG
AAGTGACACATGACAGCGCTGATTGTAAAAGCGGCATGAGTTCATATAAATTTTCTAGAGCTCG
TTTCTGGAAGGAGGTTGCAGATGTGTATGAAACCTTTCTTGTTGGATCTTGTGGACGTGTGCTG
TCGTCAGATGTTCCTTCGGTTGACTCTGTTACTGCTGATGAGACTCTTGAGATGGCTGTACTCA
CTGTTTTTGGAGACAACGTTCTGAAATTGCAGAAGGATGCTCCTGTTGAGTTGTACATCGGGGA
CAAGCTTATGTGCTACAGTATCAGAAACCAGCAAAGAGAAGGACCATTGCCTAGTGTAAGGATT
GATGAGACAATTTGTGTTCTACAAGAACTCGCTAGACTAATAATAAACATGGAAACAGCTAATG
CCCTCAGCATGCCATTATATCTAAAAGAAGCTTTAGAGAAGAATGAGTCCCATGGACGGGCTCA
TTTATTGGCTTTGCTACCAACCTTTTCTGAGCTTGTTGTCTCAAG
						
					

						Genomic sequence
						
							GAGATCTCTATGTTCAAGCACAATCTCTGTTTAATGATGAAATGTATCTAAGGCTCATGGCCGT
TATGCATCTGATGATTAAGAGTTCCATGAATCCTACAGATTACGATAATGAATTGGTATGCCTG
TGAAGGGACATTCTCATCAATTGCATTTTGCTACACCATGGAGTATAAGCAACACTTTTTCTTT
TTGCTATGCAAAGTATTTGGCTATTTTACATTAGCCAGACATCCTAGTAAATGCACCTTGTGCC
ATGGTTGTTCTTACATGAGGGTAGAATATGAGAATTAGCTGCCTGGTTGGCACCTACTGGTCTA
TGGTCCTGGGATTGACACCTAAGATTGTTTTTGAGTAATCCTGAATATTTTTGGTTCTATTGGC
TACTTTACAAAAAAACAAACCAGGGTCAACAATGGCTTAGTGAAGAATACTAATCCCAATTTTA
ATATTGCATATATAGTTTACATCAGATCAACCAACCATCCACATGAACTTATTTGTAGCATATG
TAATTCTGTACAAAAAAAAATATTGTACAATTTAAACATACATGTTTATGTAGATCCATCCACA
AAAGTCCTTCTGAAGTAAAGGGGATGGATTTAGATACACTATCAGAACCACCGAATCCTTTTGA
AGAAGTCATGGGATTTCTCAACAACCTTGGGGATTTATTATAATAAAACTGTTTTGTGCTATTT
GTCATGTCTTAGCCAGTTCTTTTATTCATCTTTTTAAATTTTCAGGGTAGTATCCCTGCTCTGC
AACGAGGTATCTTGGAAATTATTCCTATGCTACGTCCAACAACTATGTTATCTTCAATGTGGTC
ACCTCTCCTCCTCGAACTACTGTGCTACCTTAATAGCCATGATACTCCCCTGCAGAAACAGGGT
AAAGAGATGCATGAACAGAAATCTGATGCAGCAAATGGTGCAACACATGGTTTTCGTAAGACTG
CATCATACCTGATATCCAACTTTTCATAATATAATGAAATACAATATCTTCTTGATTTACTCTC
TGTGATTTTATTATGGTTACAGTTGAACGGAGTCATCTCAATAACAGCAGCACAAAAATGGATA
ATGCAGTGGGCTGTGGCTGGGGTATTATGTTCATAGAAAAGCTTGTGCCGATTGTTGTCAACCT
ATTTCTGGAGGCTCCACAGAATGAAAGGTTTAATTCCTCTCCGGAAGTTATTCGATGTCTTGGA
AGGTATTTTCTTTGCATAATTCAGTTTGCTGTTACTAACAAAGCTTTGACTAAAAAAGTTCTGC
TGCCCTTATTTGTGAACCATTGCAGTTACATTGCCCCAATTTTGCAAACGGAAGCATTTTTGTA
GTTCTATAATTTTGTAGTAACAAAACATGATAGTTGAGGAAGGCTCAGGCATCTTCCTTTAATT
TCGAGCCTCATTCTTAATAATATCTGATATGAGAGCCCCTCCTCTCATATCCAGCGTTTTAATT
TTTTAGTTTTAGGACCAGTGAGCAAGAATGTATAATTATTCATACATGGAAGGAGTGTAGCTGT
ATTGGTATTGATAGTGATAGGAAATTGATAGCTGGATGTTAGAAGAGAATATTAGTGCGAACTC
ATGTTTGGGTGTAAACATGCAAACCCCCCAGATGAATCGCAAAGGTGGTCTTGAGAAGGTAGGA
TCCCTCAAAATGTATTTCACAACATCTCAGGGGGGTTAGTTCTAATCATCCAACTTGACTCTCA
ATGGTTTATTGAATCTAAACATAGGCTTGCACTTGCTACATAATCTTTTTATTTCCGTTCTGTG
TCTGACGAATTCAGTTGTGACACCTGCTTTGATGTATTTGAACCTGTGCATATAAGGTCCCAAT
TATGTATTGCCTCCGTAGATTTTTATTGGGCATGCTTATTTGGAAAAAGTCTTCAAGGTCACAC
TTCGCCATGTATAAAACCAATACCTTAAGATACTAAAGACGAATCTATTAGTAATAATTTTTAT
ACACAATGTATCTGAAATTTGGCTAACTGTTGGTCAATTTCTACAAGGTTTGACTTTTAAAAAA
ATCGAAATGCACTTTATAAAAATCTACAGAGGGAGTATCTAATACTAGCAAGAAACATTTACTG
GTAAACAGATATGATGCAAACGCAAGGATATCTTTTCTTGCAAAGAATATTCTATGCTAATATG
CATGCTGCAGAATTCAATAAGTTTTTCATTCTGATTATAATTTTCTGAAAGCTTGGTTGATATC
TTATTGTTAAAAGGCAAATATAAATTTTTTTATGGTCTTTTTGAATACTTACCCTCAAAGCTGG
TAATACAGGTGCATGAACACAAGGAGAGACAATCCAAAGGGTACACTTTGGAGAGTTTCTGCTG
AATGCTTCAATCGTGTTTTGGTAGATGAAGTGACACATGACAGCGCTGATTGTAAAAGCGGCAT
GAGTTCATATAAATTTTCTAGAGCTCGTTTCTGGAAGGAGGTTGCAGATGTGTATGAAACCTTT
CTTGTTGGATCTTGTGGACGTGTGCTGTCGTCAGATGTTCCTTCGGTTGACTCTGTTACTGCTG
ATGAGACTCTTGAGATGGCTGTACTCACTGTTTTTGGAGACAACGTTCTGAAATTGCAGAAGGA
TGCTCCTGTTGAGGTTAGTTCTCAAACCATACATACTCCTCCTTTATAACATTTGCTTACTTCT
CTCCTGCATAAGAATTGCTAGTTGGTTGAGTTGTAATAATCGTTATTTTCCTAACCTTGTTAAT
GCTCAATTGTGTCCATCTATCTAGAGGCCAAATCTTTACTTTGATCACTTTTCAGGTATTACAA
AGACTTGTGAACTGCCTTGATCACTGTGCATCACGAACAGGATCCTTGCCTCTTCAAACCGTTG
GCCTTGTACCTTTGCACTGCAGCAGATTTTCACTGAGCTGCTTGCAGATGATGTTTTCTTTATG
CTGGTACTACCACACTGCAGTTTCTCTGATTCGTTTTCTCCACAAGGTGTCAAACTTGGTTTGG
GTGGAATTTTGGGCCAATTAACTGTTAAACTATGGGCAAATTTGTTTTTTACTCATATTTTGTT
TGAATATTTATTGCAACTTTTTCAGCAAATAGTATTTAATACTTACCAAATCTGACAAAAATAG
CCCCAAAAGACAAACGTGATAACCAGTGCTGCATTGCACCTGCTCCTCACTGTGAAAACCAGAT
CCGTCAGTGTTCAAAAGCATTTGCAGATTATCTTAAAAATAATTGGAAACATTGCCCATGTTTG
AGAATTCACACATTACATGATAACATAGGATAGTCCATAGACCCACAAGACTAGCAACTCATCA
GAACGTTAACCTCCGCTACACTCTGCATACATTTAGAACTGAATAGTATAGCTTGTTTCAATGA
TTGCAGTTGTACATCGGGGACAAGCTTATGTGCTACAGTATCAGAAACCAGCAAAGTATCGATC
TCAGTTCTTACGAAGCGGTGTGAGATTATACTGGGTCAGTTTTTAGCTGATGAAAATGATCTAG
GTAAATGGATAATGATATAATTTTGAACTTCCTTATATATAATATGTAAACCTGCTTCATTTTC
TGGTTTCCTTTCAACATGGTAATTGATATTTCAAATATGCTGCAGGAGAAGGACCATTGCCTAG
TGTAAGGATTGATGAGACAATTTGTGTTCTACAAGAACTCGCTAGACTAATAATAAACATGGAA
ACAGCTAATGCCCTCAGCATGCCATTATATCTAAAAGAAGCTTTAGAGAAGAATGAGTCCCATG
GACGGGCTCATTTATTGGCTTTGCTACCAACCTTTTCTGAGCTTGTTGTCTCAAG
						
					

			
		

Sequences
Splice junction sequence	TGCCATTATATCTAAAAGAAGCTTTAGAGAAGAATGAGTCCCATGGACGGGCTCATTTATTGGC TTTGCTACCAACCTTTTCTGAGCTTGTTGTCTCAAGgagatctctatgttcaagcacaatctct gtttaatgatgaaatgtatctaaggctcatggccgttatgcatctgatgattaagagttccatg aatcctac
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 1069 Transcript exons: 32642282-32642400,32643031-32643232,32643328-32643499,32 644594-32644918,32645680-32645728,32645911-32646112 GAGATCTCTATGTTCAAGCACAATCTCTGTTTAATGATGAAATGTATCTAAGGCTCATGGCCGT TATGCATCTGATGATTAAGAGTTCCATGAATCCTACAGATTACGATAATGAATTGGGTAGTATC CCTGCTCTGCAACGAGGTATCTTGGAAATTATTCCTATGCTACGTCCAACAACTATGTTATCTT CAATGTGGTCACCTCTCCTCCTCGAACTACTGTGCTACCTTAATAGCCATGATACTCCCCTGCA GAAACAGGGTAAAGAGATGCATGAACAGAAATCTGATGCAGCAAATGGTGCAACACATGGTTTT CTTGAACGGAGTCATCTCAATAACAGCAGCACAAAAATGGATAATGCAGTGGGCTGTGGCTGGG GTATTATGTTCATAGAAAAGCTTGTGCCGATTGTTGTCAACCTATTTCTGGAGGCTCCACAGAA TGAAAGGTTTAATTCCTCTCCGGAAGTTATTCGATGTCTTGGAAGGTGCATGAACACAAGGAGA GACAATCCAAAGGGTACACTTTGGAGAGTTTCTGCTGAATGCTTCAATCGTGTTTTGGTAGATG AAGTGACACATGACAGCGCTGATTGTAAAAGCGGCATGAGTTCATATAAATTTTCTAGAGCTCG TTTCTGGAAGGAGGTTGCAGATGTGTATGAAACCTTTCTTGTTGGATCTTGTGGACGTGTGCTG TCGTCAGATGTTCCTTCGGTTGACTCTGTTACTGCTGATGAGACTCTTGAGATGGCTGTACTCA CTGTTTTTGGAGACAACGTTCTGAAATTGCAGAAGGATGCTCCTGTTGAGTTGTACATCGGGGA CAAGCTTATGTGCTACAGTATCAGAAACCAGCAAAGAGAAGGACCATTGCCTAGTGTAAGGATT GATGAGACAATTTGTGTTCTACAAGAACTCGCTAGACTAATAATAAACATGGAAACAGCTAATG CCCTCAGCATGCCATTATATCTAAAAGAAGCTTTAGAGAAGAATGAGTCCCATGGACGGGCTCA TTTATTGGCTTTGCTACCAACCTTTTCTGAGCTTGTTGTCTCAAG
Genomic sequence	GAGATCTCTATGTTCAAGCACAATCTCTGTTTAATGATGAAATGTATCTAAGGCTCATGGCCGT TATGCATCTGATGATTAAGAGTTCCATGAATCCTACAGATTACGATAATGAATTGGTATGCCTG TGAAGGGACATTCTCATCAATTGCATTTTGCTACACCATGGAGTATAAGCAACACTTTTTCTTT TTGCTATGCAAAGTATTTGGCTATTTTACATTAGCCAGACATCCTAGTAAATGCACCTTGTGCC ATGGTTGTTCTTACATGAGGGTAGAATATGAGAATTAGCTGCCTGGTTGGCACCTACTGGTCTA TGGTCCTGGGATTGACACCTAAGATTGTTTTTGAGTAATCCTGAATATTTTTGGTTCTATTGGC TACTTTACAAAAAAACAAACCAGGGTCAACAATGGCTTAGTGAAGAATACTAATCCCAATTTTA ATATTGCATATATAGTTTACATCAGATCAACCAACCATCCACATGAACTTATTTGTAGCATATG TAATTCTGTACAAAAAAAAATATTGTACAATTTAAACATACATGTTTATGTAGATCCATCCACA AAAGTCCTTCTGAAGTAAAGGGGATGGATTTAGATACACTATCAGAACCACCGAATCCTTTTGA AGAAGTCATGGGATTTCTCAACAACCTTGGGGATTTATTATAATAAAACTGTTTTGTGCTATTT GTCATGTCTTAGCCAGTTCTTTTATTCATCTTTTTAAATTTTCAGGGTAGTATCCCTGCTCTGC AACGAGGTATCTTGGAAATTATTCCTATGCTACGTCCAACAACTATGTTATCTTCAATGTGGTC ACCTCTCCTCCTCGAACTACTGTGCTACCTTAATAGCCATGATACTCCCCTGCAGAAACAGGGT AAAGAGATGCATGAACAGAAATCTGATGCAGCAAATGGTGCAACACATGGTTTTCGTAAGACTG CATCATACCTGATATCCAACTTTTCATAATATAATGAAATACAATATCTTCTTGATTTACTCTC TGTGATTTTATTATGGTTACAGTTGAACGGAGTCATCTCAATAACAGCAGCACAAAAATGGATA ATGCAGTGGGCTGTGGCTGGGGTATTATGTTCATAGAAAAGCTTGTGCCGATTGTTGTCAACCT ATTTCTGGAGGCTCCACAGAATGAAAGGTTTAATTCCTCTCCGGAAGTTATTCGATGTCTTGGA AGGTATTTTCTTTGCATAATTCAGTTTGCTGTTACTAACAAAGCTTTGACTAAAAAAGTTCTGC TGCCCTTATTTGTGAACCATTGCAGTTACATTGCCCCAATTTTGCAAACGGAAGCATTTTTGTA GTTCTATAATTTTGTAGTAACAAAACATGATAGTTGAGGAAGGCTCAGGCATCTTCCTTTAATT TCGAGCCTCATTCTTAATAATATCTGATATGAGAGCCCCTCCTCTCATATCCAGCGTTTTAATT TTTTAGTTTTAGGACCAGTGAGCAAGAATGTATAATTATTCATACATGGAAGGAGTGTAGCTGT ATTGGTATTGATAGTGATAGGAAATTGATAGCTGGATGTTAGAAGAGAATATTAGTGCGAACTC ATGTTTGGGTGTAAACATGCAAACCCCCCAGATGAATCGCAAAGGTGGTCTTGAGAAGGTAGGA TCCCTCAAAATGTATTTCACAACATCTCAGGGGGGTTAGTTCTAATCATCCAACTTGACTCTCA ATGGTTTATTGAATCTAAACATAGGCTTGCACTTGCTACATAATCTTTTTATTTCCGTTCTGTG TCTGACGAATTCAGTTGTGACACCTGCTTTGATGTATTTGAACCTGTGCATATAAGGTCCCAAT TATGTATTGCCTCCGTAGATTTTTATTGGGCATGCTTATTTGGAAAAAGTCTTCAAGGTCACAC TTCGCCATGTATAAAACCAATACCTTAAGATACTAAAGACGAATCTATTAGTAATAATTTTTAT ACACAATGTATCTGAAATTTGGCTAACTGTTGGTCAATTTCTACAAGGTTTGACTTTTAAAAAA ATCGAAATGCACTTTATAAAAATCTACAGAGGGAGTATCTAATACTAGCAAGAAACATTTACTG GTAAACAGATATGATGCAAACGCAAGGATATCTTTTCTTGCAAAGAATATTCTATGCTAATATG CATGCTGCAGAATTCAATAAGTTTTTCATTCTGATTATAATTTTCTGAAAGCTTGGTTGATATC TTATTGTTAAAAGGCAAATATAAATTTTTTTATGGTCTTTTTGAATACTTACCCTCAAAGCTGG TAATACAGGTGCATGAACACAAGGAGAGACAATCCAAAGGGTACACTTTGGAGAGTTTCTGCTG AATGCTTCAATCGTGTTTTGGTAGATGAAGTGACACATGACAGCGCTGATTGTAAAAGCGGCAT GAGTTCATATAAATTTTCTAGAGCTCGTTTCTGGAAGGAGGTTGCAGATGTGTATGAAACCTTT CTTGTTGGATCTTGTGGACGTGTGCTGTCGTCAGATGTTCCTTCGGTTGACTCTGTTACTGCTG ATGAGACTCTTGAGATGGCTGTACTCACTGTTTTTGGAGACAACGTTCTGAAATTGCAGAAGGA TGCTCCTGTTGAGGTTAGTTCTCAAACCATACATACTCCTCCTTTATAACATTTGCTTACTTCT CTCCTGCATAAGAATTGCTAGTTGGTTGAGTTGTAATAATCGTTATTTTCCTAACCTTGTTAAT GCTCAATTGTGTCCATCTATCTAGAGGCCAAATCTTTACTTTGATCACTTTTCAGGTATTACAA AGACTTGTGAACTGCCTTGATCACTGTGCATCACGAACAGGATCCTTGCCTCTTCAAACCGTTG GCCTTGTACCTTTGCACTGCAGCAGATTTTCACTGAGCTGCTTGCAGATGATGTTTTCTTTATG CTGGTACTACCACACTGCAGTTTCTCTGATTCGTTTTCTCCACAAGGTGTCAAACTTGGTTTGG GTGGAATTTTGGGCCAATTAACTGTTAAACTATGGGCAAATTTGTTTTTTACTCATATTTTGTT TGAATATTTATTGCAACTTTTTCAGCAAATAGTATTTAATACTTACCAAATCTGACAAAAATAG CCCCAAAAGACAAACGTGATAACCAGTGCTGCATTGCACCTGCTCCTCACTGTGAAAACCAGAT CCGTCAGTGTTCAAAAGCATTTGCAGATTATCTTAAAAATAATTGGAAACATTGCCCATGTTTG AGAATTCACACATTACATGATAACATAGGATAGTCCATAGACCCACAAGACTAGCAACTCATCA GAACGTTAACCTCCGCTACACTCTGCATACATTTAGAACTGAATAGTATAGCTTGTTTCAATGA TTGCAGTTGTACATCGGGGACAAGCTTATGTGCTACAGTATCAGAAACCAGCAAAGTATCGATC TCAGTTCTTACGAAGCGGTGTGAGATTATACTGGGTCAGTTTTTAGCTGATGAAAATGATCTAG GTAAATGGATAATGATATAATTTTGAACTTCCTTATATATAATATGTAAACCTGCTTCATTTTC TGGTTTCCTTTCAACATGGTAATTGATATTTCAAATATGCTGCAGGAGAAGGACCATTGCCTAG TGTAAGGATTGATGAGACAATTTGTGTTCTACAAGAACTCGCTAGACTAATAATAAACATGGAA ACAGCTAATGCCCTCAGCATGCCATTATATCTAAAAGAAGCTTTAGAGAAGAATGAGTCCCATG GACGGGCTCATTTATTGGCTTTGCTACCAACCTTTTCTGAGCTTGTTGTCTCAAG

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.214351995

Conservation Information
Conserved circRNAs	NA
PMCS	0.214351995

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							32646047-32642312(+)
32642324-32642312(+)
						
						Potential amino acid sequence
						
							MSPMDGLIYWLCYQPFLSLLSQGDLYVQAQSLFNDEMYLRLMAVMHLMIKSSMNPTDYDNELGS
IPALQRGILEIIPMLRPTTMLSSMWSPLLLELLCYLNSHDTPLQKQGKEMHEQKSDAANGATHG
FLERSHLNNSSTKMDNAVGCGWGIMFIEKLVPIVVNLFLEAPQNERFNSSPEVIRCLGRCMNTR
RDNPKGTLWRVSAECFNRVLVDEVTHDSADCKSGMSSYKFSRARFWKEVADVYETFLVGSCGRV
LSSDVPSVDSVTADETLEMAVLTVFGDNVLKLQKDAPVELYIGDKLMCYSIRNQQREGPLPSVR
IDETICVLQELARLIINMETANALSMPLYLKEALEKNESHGRAHLLALLPTFSELVVSRRSLCS
STISV*(+)
MYLRLMAVMHLMIKSSMNPTDYDNELGSIPALQRGILEIIPMLRPTTMLSSMWSPLLLELLCYL
NSHDTPLQKQGKEMHEQKSDAANGATHGFLERSHLNNSSTKMDNAVGCGWGIMFIEKLVPIVVN
LFLEAPQNERFNSSPEVIRCLGRCMNTRRDNPKGTLWRVSAECFNRVLVDEVTHDSADCKSGMS
SYKFSRARFWKEVADVYETFLVGSCGRVLSSDVPSVDSVTADETLEMAVLTVFGDNVLKLQKDA
PVELYIGDKLMCYSIRNQQREGPLPSVRIDETICVLQELARLIINMETANALSMPLYLKEALEK
NESHGRAHLLALLPTFSELVVSRRSLCSSTISV*(+)
						
						Sponge-miRNAs
						
							osa-miR2923 osa-miR1428e-3p 						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	Y
Potential coding position	32646047-32642312(+) 32642324-32642312(+)
Potential amino acid sequence	MSPMDGLIYWLCYQPFLSLLSQGDLYVQAQSLFNDEMYLRLMAVMHLMIKSSMNPTDYDNELGS IPALQRGILEIIPMLRPTTMLSSMWSPLLLELLCYLNSHDTPLQKQGKEMHEQKSDAANGATHG FLERSHLNNSSTKMDNAVGCGWGIMFIEKLVPIVVNLFLEAPQNERFNSSPEVIRCLGRCMNTR RDNPKGTLWRVSAECFNRVLVDEVTHDSADCKSGMSSYKFSRARFWKEVADVYETFLVGSCGRV LSSDVPSVDSVTADETLEMAVLTVFGDNVLKLQKDAPVELYIGDKLMCYSIRNQQREGPLPSVR IDETICVLQELARLIINMETANALSMPLYLKEALEKNESHGRAHLLALLPTFSELVVSRRSLCS STISV(+) MYLRLMAVMHLMIKSSMNPTDYDNELGSIPALQRGILEIIPMLRPTTMLSSMWSPLLLELLCYL NSHDTPLQKQGKEMHEQKSDAANGATHGFLERSHLNNSSTKMDNAVGCGWGIMFIEKLVPIVVN LFLEAPQNERFNSSPEVIRCLGRCMNTRRDNPKGTLWRVSAECFNRVLVDEVTHDSADCKSGMS SYKFSRARFWKEVADVYETFLVGSCGRVLSSDVPSVDSVTADETLEMAVLTVFGDNVLKLQKDA PVELYIGDKLMCYSIRNQQREGPLPSVRIDETICVLQELARLIINMETANALSMPLYLKEALEK NESHGRAHLLALLPTFSELVVSRRSLCSSTISV(+)
Sponge-miRNAs	osa-miR2923 osa-miR1428e-3p
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Chu et al., 2017

circRNA

Detail information of Os01g0772700_circ_g.19

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