Plant Circular RNA Database

Detail information of Zm00001d009541_circ_g.2

			
						 General Information
					
						CircRNA Name
						Zm00001d009541_circ_g.2
					
						ID in PlantcircBase
						zma_circ_009622
					
						Alias
						Zm08circ00033
					
						Organism
						
							Zea mays						
					
						Position
						
							chr8: 69407978-69412952  JBrowse»						
					
						Reference genome
						
							AGPv4.38						
					
						Type  
						
							ue-circRNA							
									
						Identification method
						CIRI2
					
						Parent gene
						
							Zm00001d009541						
					
						Parent gene annotation
						
							Golgin candidate 5
							
						Parent gene strand
						-
					
						Alternative splicing
						
							Zm00001d009541_circ_g.1 						
					
						Support reads
						NA
					
						Tissues
						leaf, endosperm
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Zm00001d009541_T002:9
Zm00001d009541_T001:9

General Information
CircRNA Name	Zm00001d009541_circ_g.2
ID in PlantcircBase	zma_circ_009622
Alias	Zm08circ00033
Organism	Zea mays
Position	chr8: 69407978-69412952 JBrowse»
Reference genome	AGPv4.38
Type	ue-circRNA
Identification method	CIRI2
Parent gene	Zm00001d009541
Parent gene annotation	Golgin candidate 5
Parent gene strand	-
Alternative splicing	Zm00001d009541_circ_g.1
Support reads	NA
Tissues	leaf, endosperm
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Zm00001d009541_T002:9 Zm00001d009541_T001:9

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							GATTGATGATCTCATCCTTTTCTTTCAAAAGGGCAGCTGCATCACTTTTTTTATTCTGTTCTCT
CCTTAGTGTATCACGCTCTTTGGTTAGTGCATATACcttctcaagcaggtccctgtgttctgct
gcttcttgcagctcctccttgtgcctagctctaagctccttcatctcttcttcaaactgtttag
ctcgccct

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 1062
Transcript exons: 69407978-69408196,69408306-69408404,69408529-69408594,69
408744-69408827,69408915-69408974,69411637-69411921,6941
2355-69412402,69412473-69412558,69412838-69412952
CTTCTCAAGCAGGTCCCTGTGTTCTGCTGCTTCTTGCAGCTCCTCCTTGTGCCTAGCTCTAAGC
TCCTTCATCTCTTCTTCAAACTGTTTAGCTCGCCCTTCTTGTATTGCTGCCTCCTCTTTGATTG
CTAGGTACTCCTGTCTACTTTCAGATGCTCTCTGCCTCTCCTTTTCAAGAGATCGGCTCAGCTG
TGTCTGCTCTGTTCTAAGAATTGTAATCTGGGTCTCAAGGACAGTTATCCGGGATAAACTTTGT
GACAATCTCTCATTTACAGATCGCTCCTTTTCTTCTGAAGAAGCAGCTTTAGCTTCTGCTTCCT
GAAGGCGAGAGTTTAAGGTTCTCTCCACACCAGCCCAAGCATCTTCCCTTCGAGCAGTTGTCTC
CTGCATGGCTTCAATTTGTCTTAGAAGCGGTCTGGTAGACTCAGGAACTTGCGTTACCAGTTCA
TTATAACGAAGTTCACTGGCTTGATACCGCTTTTGAAGATCATCATAGTCCCCTTTTAGTCTTT
TTTCCCTGAAAGCAGCCTCCTGTTCTTGCCGGGTGAGAAAATGCCTCAACTCCTCGATTGTCTT
AATCAGCATATTTTCTTTTTCACCAGCTTCTCCTAAAAGATTCTCCAGTTCAATTTTGGCTTCA
CTGTTGACTCTTGCTTCAGCCAATGCCTCAGCCTCTTTAGCCGCATTAAGAGCATTGGTGTAGA
ACTCCTTTTGAGCTGCAAGTTCAGTCTGATTTCTTTCTATTGTTTCTTGAAGCAACTTCTCAGT
TGCTGCTTTGTCTCTCTTGATGCTCTCAACCTTAGCCTCCTCAACCTGGATCTTTGAGTTCAGG
CGTTGTTTTTCTTCTTCAAACTCACGAATATAGCGTAGAGTTCTAGTCCATGCCTGTGCTCTCA
GTTTTCGTATTGTAGCTTCTTGAGCAGCTTGTTTTTTGGATAGTTCTTCACCTTCAGCCATGAC
CTGATTGATGATCTCATCCTTTTCTTTCAAAAGGGCAGCTGCATCACTTTTTTTATTCTGTTCT
CTCCTTAGTGTATCACGCTCTTTGGTTAGTGCATATAC
						
					

						Genomic sequence
						
							CTTCTCAAGCAGGTCCCTGTGTTCTGCTGCTTCTTGCAGCTCCTCCTTGTGCCTAGCTCTAAGC
TCCTTCATCTCTTCTTCAAACTGTTTAGCTCGCCCTTCTTGTATTGCTGCCTCCTCTTTGATTG
CTAGGTACTCCTGTCTACTTTCAGATGCTCTCTGCCTCTCCTTTTCAAGAGATCGGCTCAGCTG
TGTCTGCTCTGTTCTAAGAATTGTAATCTGCATAACCCAATAGTCACCCCAAAAATTACTTGAC
TTAAATCTGAAAGCAAGGTCTTAACACTAATACTACCATATTTTTTGTTTTGCTAGAAATTGAT
GCACAAACCTGGGTCTCAAGGACAGTTATCCGGGATAAACTTTGTGACAATCTCTCATTTACAG
ATCGCTCCTTTTCTTCTGAAGAAGCAGCTTTAGCTTCTGCTTCCTGCATATTCAAGCAAAACAA
CAGATTATACATGATGCATTAAGAAAAATAACAGAAACTTATAGTTCAAGTTTTATTCAATGCT
TCTATGCAGCTACAGTTAAAAACGTGTTTTTTAACAAACCTGAAGGCGAGAGTTTAAGGTTCTC
TCCACACCAGCCCAAGCATCTTCCCTTCGAGCAGTTGTCTCCTGCAAATATTAACATGCAATTG
ATAAATTGAAAAAAGCAATACACGCCCAATATGGAAATAAAAAAGAAATGTGATGCATAGACCA
AGAATAAACAACGAAAGAAACATGAAACATATTCACAAAAAAGCAAAATACAGGGACAATACCT
GCATGGCTTCAATTTGTCTTAGAAGCGGTCTGGTAGACTCAGGAACTTGCGTTACCAGTTCATT
ATAACGAAGTTCACTGGCCTGAAGCATTAAATATGAACAAAATGAGAAATGCTCCGTACCCGTT
TTACTGCTTGGCACCAGCTAACAAAGAAGTGCCTTGCTTACTTGATACCGCTTTTGAAGATCAT
CATAGTCCCCTTTTAGTCTTTTTTCCCTGAAAGCAGCCTGAAATACAAAGAAACAGTTAGCCAA
TGGAACTGTTAGCTTTGCCCAGGAACCGCTCAAACACACACACCAACGCTCTTGGCAAGAGGTA
GAAGAAGCACGACAGGAACCACTCAAAACACACGGCAACTCTCTTGGCAAGAGGTAGAAGAAGC
AAAACAGACTGTTTTCTAGCGACAAACGCCGCAGCAACGAACTTGCACGTATCTTGGTATTAAA
TTCACTGGACTTGGCAAAAAAAACATGGAGAATAGGACTACTTATAGACAAGGGCATGCCACAC
ATCCCGCCTCCATACCGGCCTTCACACCATGTGCTGGCGGAGGCAGCAGGGGGCAGCCGGGGCA
AGCGCACCCCCTACACGCCGCTGGTCCAAGGTACCCCACATAATAAAATAGTTAGAAGGCTTTA
TGACTGATTACAAAATAGAGTTTCAGATGAGTGGTTCAGTGACTTGATATGCTATACCGAGTGA
AAGATGTTTAGAAGCCTTGATGACTGTATGATTATCGAACGTTCTTAAGCCATGAGTAAACGTA
GAATGCCTACTACTCGCATTACTACTTATGGCTAGCAAATAGAAACTTAGTGGTATGTTACATA
ATATTTTATTGCTACTCATGTGCTACATATATACTGTTTTTTGTTACACTAGCACCTCCTTAAT
TTTAATCATGCGTCCGCCACTATCACCATGATCCACACTTCCACAAGACTTGTGCAGCAACACC
ATGAGCAACTTGCTCATCAGGCCAACGTGGCTCCACCATGCGAATCGGCACCATGCACACACTA
CTAGAACAACCAGGATTTTATCATAACAACCGACTTGAACATAAGTCTAGGACGTACATGACTG
GAACCTGATCCAAACTGCTGCAGCTCGCCTGCATGGTTGCATGCACGTGAACTCACGCCACACG
ATCGCGCCAACGCCCACGCACATACCCAAACTTGACCCGCGCGGATGGAACCATGAGTCCATGA
CACCCCCACACCCAACCTATAGGAGTGTCAGCTCGATGTCGATGTGGGCAAGGAAGGCCATTTC
CTTCTTCTCGCGGCAGTCCTTGGTCTTGTGGCCGCGCTCGCCACATTCGCAGCATCGTCCTCGG
TAGCGGCTCCCGCCACACTTAATCCTCAAGCTCATGTTGCTACTGTGGCTGTTGTTCCAGCCAC
CACGCCTCTCGCCACTGACATGCTCCTTCACCACCGTGTGACAGCTGTTTGCCGTAGCGGTGAA
GCCGATAGTCCTCCCATTGCTCCTCAGTGAGCAGCAGGCACCCGACGCCGTCTGCAGCCGACTC
GACGATGTCGCTGCATCGCTCCTCCACCACGCGCAGCCGCCCAACAAGCTCCTTGAGCGACATT
TTCTTCAGGTCACCGAACATCTCGATGGAGCACGCAATCTGGCTGTACTTCAGCAGCACAACAT
GGAAACATGCAACATCTTCTTGATAACGTACTCCTCCATCTTCTCCCCAAATCCATGCAGTTTC
GTGGCACGAGAGTCTAATACATGGCAAAGTTGTTGATCGCCTCGCCGCCCTTGAATGCACGAGC
TCGAACTGATTGAGGAGGTACTGCGCCTTGGCCTCCTGCATGCATGCATCGTCCATCCTCAAGG
ACTTCACCACCACCCATGCCTCATTTGCTCTCTTCTTTGTAGCAAGCCCAAACTTCATCGGCAC
CGCGCACAGGATGACGGCTAGCACCCATCGATCCGTGTCGTGCTCAACTTTGTCGGCCTCCACA
ACATCCCAGAGCTCCTTCCCTCCATGTTGGCCTGCACCTCGAGCGCACACTCATGGTAGTTTGT
CTTTGTCAACTTCGGGATCTCTGATGTGTCGCTGATGATGCGCTCCACCACGACCGTACATGGT
GCACCATCGCCGGAGCTACCGGGCTTGAATCACCGACCTTCTTCGACATCAACATCTTCAGCTC
GCTCTCCTATACCTAACCTAGGCTTTGATACCACTTGTTGTTTGCCCAGGAACCACTCAAACAC
ACGCTGACACGCATACCAACGCTCTTGGAAAGAGGTAGAAGAAGCACAACAGACACTGTTTTTG
GCGATGAACTCACCTGTATCTTGGCTATTTAATTCACTGGACTTGGCAAAAAAAACATGGACTA
TAGGGCTACTTATATACAAGGACATGCCACGGAGCTCGGCCATGCCGGCCTTCGCACCATGATC
CGCAGGACTCGCACAGCAACACCATGAGCCACATGCTCATCCGGATAACAAAACTTTCACCATG
AAGATCGGCGTCATGCACACCAGACACCACAACAACAACCTGGACTCTATCCTACAAACAATAC
AAACAGAACTCGAGGACGCACACGACTTGAACCTGATCCAAAACTACCGCGGTTAGTCTGCATG
CACGTGCACTCACGCCACGCCACTGCGCCGACACCCACACACATACCTGAACTTGACCTGCACG
CATGGACAACACCCATTGCGTGATTTAATCCTGACAGGAACTGAATGGACGGCTACAAAGGTAG
ATGACCAAATAGTTTGTTGGTATTAAGGCATATAGCTAAATGGCATAGATTCTAGTCACGTCAG
CAAATAAAGTACTCCTGTTTACTTCTATTATTGACAGATAGAGAGAAGGTGTGGATACAGATGT
TCAGCATTTACCTCCTGTTCTTGCCGGGTGAGAAAATGCCTCAACTCCTCGATTGTCTTAATCA
GCATATTTTCTTTTTCACCAGCTTCTCCTAAAAGATTCTCCAGTTCAATTTTGGCTTCACTGTT
GACTCTTGCTTCAGCCAATGCCTCAGCCTCTTTAGCCGCATTAAGAGCATTGGTGTAGAACTCC
TTTTGAGCTGCAAGTTCAGTCTGATTTCTTTCTATTGTTTCTTGAAGCAACTTCTCAGTTGCTG
CTTTGTCTCTCTTGATGCTCTCAACCTTAGCCTCCTCAACCTGTTTAGTCATAAATTGTCAAGT
ACATACCTACCTTTGAGAGAAGAAAAAAAACAGACATAACATCTTGTTCAGGGCGCCAAACTAA
CTTAATTCCATCTATCTAAAGATAATAAGGGGAGAAAGCTTGTATAATTGCAATTAAGTCACAA
AACTGTAAACAGACATACATGTATGCCTGTTTGATTGTAACTGCCATGAAATACAAATGAAGTA
ACCACAGTTTAAATGGTACCTACTGCATCAGGTCAAGAACAGCAGTAATAAAGCGAGGGAAAGC
TGATTTCATATTATGGAATCCAGCAAAATATGTATTTTTCATGATCAAGAAGGTAAGTGAAGTT
TTATTACATTGCATCACCAACATCAATAAGAAAAGAACGCGGTTTGGATCATACTAACTATAGC
TATACCAAGTTCATGTTTTTTTTACCTGGATCTTTGAGTTCAGGCGTTGTTTTTCTTCTTCAAA
CTCACGAATCTAACTTCAACAGAAGAACAAAAACAGAGCACAATTGGTCATACTGAGGAAAGCA
CTTTATCATCTGAACATAGCGTAGAGTTCTAGTCCATGCCTGTGCTCTCAGTTTTCGTATTGTA
GCTTCTTGAGCAGCTTGTTTTTTGGATAGTTCTTCACCTAATTCATTAGTAAAAACAAGTTGTT
GATGTCATTAGATTGCTCACCTATTTGTGCATCTAGAGTAAAGAAGAATAAGAAGGAACATCAG
CAAGATATAATGCATTATATGGTGGTACTTGTGCAGCAGTGCTTGAAGTGTTCATTAGAATTTT
AACATATGGAATAATTATGTGTATTCATGACATTGCATAGGGACAGATCTTTGAATAATGAGAA
TCTAACATTGGCTTACAATAAAAATAGTAGACCAAGCATAATATGTAAGGTTCTACATACCTTC
AGCCATGACCTGATTGATGATCTCATCCTTTTCTTTCAAAAGGGCAGCTGCATCACTTTTTTTA
TTCTGTTCTCTCCTTAGTGTATCACGCTCTTTGGTTAGTGCATATAC
						
					

			
		

Sequences
Splice junction sequence	GATTGATGATCTCATCCTTTTCTTTCAAAAGGGCAGCTGCATCACTTTTTTTATTCTGTTCTCT CCTTAGTGTATCACGCTCTTTGGTTAGTGCATATACcttctcaagcaggtccctgtgttctgct gcttcttgcagctcctccttgtgcctagctctaagctccttcatctcttcttcaaactgtttag ctcgccct
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 1062 Transcript exons: 69407978-69408196,69408306-69408404,69408529-69408594,69 408744-69408827,69408915-69408974,69411637-69411921,6941 2355-69412402,69412473-69412558,69412838-69412952 CTTCTCAAGCAGGTCCCTGTGTTCTGCTGCTTCTTGCAGCTCCTCCTTGTGCCTAGCTCTAAGC TCCTTCATCTCTTCTTCAAACTGTTTAGCTCGCCCTTCTTGTATTGCTGCCTCCTCTTTGATTG CTAGGTACTCCTGTCTACTTTCAGATGCTCTCTGCCTCTCCTTTTCAAGAGATCGGCTCAGCTG TGTCTGCTCTGTTCTAAGAATTGTAATCTGGGTCTCAAGGACAGTTATCCGGGATAAACTTTGT GACAATCTCTCATTTACAGATCGCTCCTTTTCTTCTGAAGAAGCAGCTTTAGCTTCTGCTTCCT GAAGGCGAGAGTTTAAGGTTCTCTCCACACCAGCCCAAGCATCTTCCCTTCGAGCAGTTGTCTC CTGCATGGCTTCAATTTGTCTTAGAAGCGGTCTGGTAGACTCAGGAACTTGCGTTACCAGTTCA TTATAACGAAGTTCACTGGCTTGATACCGCTTTTGAAGATCATCATAGTCCCCTTTTAGTCTTT TTTCCCTGAAAGCAGCCTCCTGTTCTTGCCGGGTGAGAAAATGCCTCAACTCCTCGATTGTCTT AATCAGCATATTTTCTTTTTCACCAGCTTCTCCTAAAAGATTCTCCAGTTCAATTTTGGCTTCA CTGTTGACTCTTGCTTCAGCCAATGCCTCAGCCTCTTTAGCCGCATTAAGAGCATTGGTGTAGA ACTCCTTTTGAGCTGCAAGTTCAGTCTGATTTCTTTCTATTGTTTCTTGAAGCAACTTCTCAGT TGCTGCTTTGTCTCTCTTGATGCTCTCAACCTTAGCCTCCTCAACCTGGATCTTTGAGTTCAGG CGTTGTTTTTCTTCTTCAAACTCACGAATATAGCGTAGAGTTCTAGTCCATGCCTGTGCTCTCA GTTTTCGTATTGTAGCTTCTTGAGCAGCTTGTTTTTTGGATAGTTCTTCACCTTCAGCCATGAC CTGATTGATGATCTCATCCTTTTCTTTCAAAAGGGCAGCTGCATCACTTTTTTTATTCTGTTCT CTCCTTAGTGTATCACGCTCTTTGGTTAGTGCATATAC
Genomic sequence	CTTCTCAAGCAGGTCCCTGTGTTCTGCTGCTTCTTGCAGCTCCTCCTTGTGCCTAGCTCTAAGC TCCTTCATCTCTTCTTCAAACTGTTTAGCTCGCCCTTCTTGTATTGCTGCCTCCTCTTTGATTG CTAGGTACTCCTGTCTACTTTCAGATGCTCTCTGCCTCTCCTTTTCAAGAGATCGGCTCAGCTG TGTCTGCTCTGTTCTAAGAATTGTAATCTGCATAACCCAATAGTCACCCCAAAAATTACTTGAC TTAAATCTGAAAGCAAGGTCTTAACACTAATACTACCATATTTTTTGTTTTGCTAGAAATTGAT GCACAAACCTGGGTCTCAAGGACAGTTATCCGGGATAAACTTTGTGACAATCTCTCATTTACAG ATCGCTCCTTTTCTTCTGAAGAAGCAGCTTTAGCTTCTGCTTCCTGCATATTCAAGCAAAACAA CAGATTATACATGATGCATTAAGAAAAATAACAGAAACTTATAGTTCAAGTTTTATTCAATGCT TCTATGCAGCTACAGTTAAAAACGTGTTTTTTAACAAACCTGAAGGCGAGAGTTTAAGGTTCTC TCCACACCAGCCCAAGCATCTTCCCTTCGAGCAGTTGTCTCCTGCAAATATTAACATGCAATTG ATAAATTGAAAAAAGCAATACACGCCCAATATGGAAATAAAAAAGAAATGTGATGCATAGACCA AGAATAAACAACGAAAGAAACATGAAACATATTCACAAAAAAGCAAAATACAGGGACAATACCT GCATGGCTTCAATTTGTCTTAGAAGCGGTCTGGTAGACTCAGGAACTTGCGTTACCAGTTCATT ATAACGAAGTTCACTGGCCTGAAGCATTAAATATGAACAAAATGAGAAATGCTCCGTACCCGTT TTACTGCTTGGCACCAGCTAACAAAGAAGTGCCTTGCTTACTTGATACCGCTTTTGAAGATCAT CATAGTCCCCTTTTAGTCTTTTTTCCCTGAAAGCAGCCTGAAATACAAAGAAACAGTTAGCCAA TGGAACTGTTAGCTTTGCCCAGGAACCGCTCAAACACACACACCAACGCTCTTGGCAAGAGGTA GAAGAAGCACGACAGGAACCACTCAAAACACACGGCAACTCTCTTGGCAAGAGGTAGAAGAAGC AAAACAGACTGTTTTCTAGCGACAAACGCCGCAGCAACGAACTTGCACGTATCTTGGTATTAAA TTCACTGGACTTGGCAAAAAAAACATGGAGAATAGGACTACTTATAGACAAGGGCATGCCACAC ATCCCGCCTCCATACCGGCCTTCACACCATGTGCTGGCGGAGGCAGCAGGGGGCAGCCGGGGCA AGCGCACCCCCTACACGCCGCTGGTCCAAGGTACCCCACATAATAAAATAGTTAGAAGGCTTTA TGACTGATTACAAAATAGAGTTTCAGATGAGTGGTTCAGTGACTTGATATGCTATACCGAGTGA AAGATGTTTAGAAGCCTTGATGACTGTATGATTATCGAACGTTCTTAAGCCATGAGTAAACGTA GAATGCCTACTACTCGCATTACTACTTATGGCTAGCAAATAGAAACTTAGTGGTATGTTACATA ATATTTTATTGCTACTCATGTGCTACATATATACTGTTTTTTGTTACACTAGCACCTCCTTAAT TTTAATCATGCGTCCGCCACTATCACCATGATCCACACTTCCACAAGACTTGTGCAGCAACACC ATGAGCAACTTGCTCATCAGGCCAACGTGGCTCCACCATGCGAATCGGCACCATGCACACACTA CTAGAACAACCAGGATTTTATCATAACAACCGACTTGAACATAAGTCTAGGACGTACATGACTG GAACCTGATCCAAACTGCTGCAGCTCGCCTGCATGGTTGCATGCACGTGAACTCACGCCACACG ATCGCGCCAACGCCCACGCACATACCCAAACTTGACCCGCGCGGATGGAACCATGAGTCCATGA CACCCCCACACCCAACCTATAGGAGTGTCAGCTCGATGTCGATGTGGGCAAGGAAGGCCATTTC CTTCTTCTCGCGGCAGTCCTTGGTCTTGTGGCCGCGCTCGCCACATTCGCAGCATCGTCCTCGG TAGCGGCTCCCGCCACACTTAATCCTCAAGCTCATGTTGCTACTGTGGCTGTTGTTCCAGCCAC CACGCCTCTCGCCACTGACATGCTCCTTCACCACCGTGTGACAGCTGTTTGCCGTAGCGGTGAA GCCGATAGTCCTCCCATTGCTCCTCAGTGAGCAGCAGGCACCCGACGCCGTCTGCAGCCGACTC GACGATGTCGCTGCATCGCTCCTCCACCACGCGCAGCCGCCCAACAAGCTCCTTGAGCGACATT TTCTTCAGGTCACCGAACATCTCGATGGAGCACGCAATCTGGCTGTACTTCAGCAGCACAACAT GGAAACATGCAACATCTTCTTGATAACGTACTCCTCCATCTTCTCCCCAAATCCATGCAGTTTC GTGGCACGAGAGTCTAATACATGGCAAAGTTGTTGATCGCCTCGCCGCCCTTGAATGCACGAGC TCGAACTGATTGAGGAGGTACTGCGCCTTGGCCTCCTGCATGCATGCATCGTCCATCCTCAAGG ACTTCACCACCACCCATGCCTCATTTGCTCTCTTCTTTGTAGCAAGCCCAAACTTCATCGGCAC CGCGCACAGGATGACGGCTAGCACCCATCGATCCGTGTCGTGCTCAACTTTGTCGGCCTCCACA ACATCCCAGAGCTCCTTCCCTCCATGTTGGCCTGCACCTCGAGCGCACACTCATGGTAGTTTGT CTTTGTCAACTTCGGGATCTCTGATGTGTCGCTGATGATGCGCTCCACCACGACCGTACATGGT GCACCATCGCCGGAGCTACCGGGCTTGAATCACCGACCTTCTTCGACATCAACATCTTCAGCTC GCTCTCCTATACCTAACCTAGGCTTTGATACCACTTGTTGTTTGCCCAGGAACCACTCAAACAC ACGCTGACACGCATACCAACGCTCTTGGAAAGAGGTAGAAGAAGCACAACAGACACTGTTTTTG GCGATGAACTCACCTGTATCTTGGCTATTTAATTCACTGGACTTGGCAAAAAAAACATGGACTA TAGGGCTACTTATATACAAGGACATGCCACGGAGCTCGGCCATGCCGGCCTTCGCACCATGATC CGCAGGACTCGCACAGCAACACCATGAGCCACATGCTCATCCGGATAACAAAACTTTCACCATG AAGATCGGCGTCATGCACACCAGACACCACAACAACAACCTGGACTCTATCCTACAAACAATAC AAACAGAACTCGAGGACGCACACGACTTGAACCTGATCCAAAACTACCGCGGTTAGTCTGCATG CACGTGCACTCACGCCACGCCACTGCGCCGACACCCACACACATACCTGAACTTGACCTGCACG CATGGACAACACCCATTGCGTGATTTAATCCTGACAGGAACTGAATGGACGGCTACAAAGGTAG ATGACCAAATAGTTTGTTGGTATTAAGGCATATAGCTAAATGGCATAGATTCTAGTCACGTCAG CAAATAAAGTACTCCTGTTTACTTCTATTATTGACAGATAGAGAGAAGGTGTGGATACAGATGT TCAGCATTTACCTCCTGTTCTTGCCGGGTGAGAAAATGCCTCAACTCCTCGATTGTCTTAATCA GCATATTTTCTTTTTCACCAGCTTCTCCTAAAAGATTCTCCAGTTCAATTTTGGCTTCACTGTT GACTCTTGCTTCAGCCAATGCCTCAGCCTCTTTAGCCGCATTAAGAGCATTGGTGTAGAACTCC TTTTGAGCTGCAAGTTCAGTCTGATTTCTTTCTATTGTTTCTTGAAGCAACTTCTCAGTTGCTG CTTTGTCTCTCTTGATGCTCTCAACCTTAGCCTCCTCAACCTGTTTAGTCATAAATTGTCAAGT ACATACCTACCTTTGAGAGAAGAAAAAAAACAGACATAACATCTTGTTCAGGGCGCCAAACTAA CTTAATTCCATCTATCTAAAGATAATAAGGGGAGAAAGCTTGTATAATTGCAATTAAGTCACAA AACTGTAAACAGACATACATGTATGCCTGTTTGATTGTAACTGCCATGAAATACAAATGAAGTA ACCACAGTTTAAATGGTACCTACTGCATCAGGTCAAGAACAGCAGTAATAAAGCGAGGGAAAGC TGATTTCATATTATGGAATCCAGCAAAATATGTATTTTTCATGATCAAGAAGGTAAGTGAAGTT TTATTACATTGCATCACCAACATCAATAAGAAAAGAACGCGGTTTGGATCATACTAACTATAGC TATACCAAGTTCATGTTTTTTTTACCTGGATCTTTGAGTTCAGGCGTTGTTTTTCTTCTTCAAA CTCACGAATCTAACTTCAACAGAAGAACAAAAACAGAGCACAATTGGTCATACTGAGGAAAGCA CTTTATCATCTGAACATAGCGTAGAGTTCTAGTCCATGCCTGTGCTCTCAGTTTTCGTATTGTA GCTTCTTGAGCAGCTTGTTTTTTGGATAGTTCTTCACCTAATTCATTAGTAAAAACAAGTTGTT GATGTCATTAGATTGCTCACCTATTTGTGCATCTAGAGTAAAGAAGAATAAGAAGGAACATCAG CAAGATATAATGCATTATATGGTGGTACTTGTGCAGCAGTGCTTGAAGTGTTCATTAGAATTTT AACATATGGAATAATTATGTGTATTCATGACATTGCATAGGGACAGATCTTTGAATAATGAGAA TCTAACATTGGCTTACAATAAAAATAGTAGACCAAGCATAATATGTAAGGTTCTACATACCTTC AGCCATGACCTGATTGATGATCTCATCCTTTTCTTTCAAAAGGGCAGCTGCATCACTTTTTTTA TTCTGTTCTCTCCTTAGTGTATCACGCTCTTTGGTTAGTGCATATAC

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.176712748

Conservation Information
Conserved circRNAs	NA
PMCS	0.176712748

			
				
						 Functional Information
					

				
						Coding potential
						Y
					

						Potential coding position
						
							69412859-69408529(+)
69412849-69407980(-)
						
					

						Potential amino acid sequence
						
							MISSFSFKRAAASLFLFCSLLSVSRSLVSAYTFSSRSLCSAASCSSSLCLALSSFISSSNCLAR
PSCIAASSLIARYSCLLSDALCLSFSRDRLSCVCSVLRIVIWVSRTVIRDKLCDNLSFTDRSFS
SEEAALASAS*(+)
MAEGEELSKKQAAQEATIRKLRAQAWTRTLRYIREFEEEKQRLNSKIQVEEAKVESIKRDKAAT
EKLLQETIERNQTELAAQKEFYTNALNAAKEAEALAEARVNSEAKIELENLLGEAGEKENMLIK
TIEELRHFLTRQEQEAAFREKRLKGDYDDLQKRYQASELRYNELVTQVPESTRPLLRQIEAMQE
TTARREDAWAGVERTLNSRLQEAEAKAASSEEKERSVNERLSQSLSRITVLETQITILRTEQTQ
LSRSLEKERQRASESRQEYLAIKEEAAIQEGRAKQFEEEMKELRARHKEELQEAAEHRDLLEKV
YALTKERDTLRREQNKKSDAAALLKEKDEIINQVMAEGEELSKKQAAQEATIRKLRAQAWTRTL
RYIREFEEEKQRLNSKIQVEEAKVESIKRDKAATEKLLQETIERNQTELAAQKEFYTNALNAAK
EAEALAEARVNSEAKIELENLLGEAGEKENMLIKTIEELRHFLTRQEQEAAFREKRLKGDYDDL
QKRYQASELRYNELVTQVPESTRPLLRQIEAMQETTARREDAWAGVERTLNSRLQEAEAKAASS
EEKERSVNERLSQSLSRITVLETQITILRTEQTQLSRSLEKERQRASESRQEYLAIKEEAAIQE
GRAKQFEEEMKELRARHKEELQEAAEHRDLLEKVYALTKERDTLRREQNKKSDAAALLKEKDEI
INQVMAEGEELSKKQAAQEATIRKLRAQAWTRTLRYIREFEEEKQRLNSKIQVEEAKVESIKRD
KAATEKLLQETIERNQTELAAQKEFYTNALNAAKEAEALAEARVNSEAKIELENLLGEAGEKEN
MLIKTIEELRHFLTRQEQEAAFREKRLKGDYDDLQKRYQASELRYNELVTQVPESTRPLLRQIE
AMQETTARREDAWAGVERTLNSRLQEAEAKAASSEEKERSVNERLSQSLSRITVLETQITILRT
EQTQLSRSLEKERQRASESRQEYLAIKEEAAIQEGRAKQFEEEMKELRARHKEELQEAAEHRDL
LEKVYALTKERDTLRREQNKKSDAAALLKEKDEIINQVMAEGEELSKKQAAQEATIRKLRAQAW
TRTLRYIREFEEEKQRLNSKIQVEEAKVESIKRDKAATEKLLQETIERNQTELAAQKEFYTNAL
NAAKEAEALAEARVNSEAKIELENLLGEAGEKENMLIKTIEELRHFLTRQEQEAAFREKRLKGD
YDDLQKRYQASELRYNELVTQVPESTRPLLRQIEAMQETTARREDAWAGVERTLNSRLQEAEAK
AASSEEKERSVNERLSQSLSRITVLETQITILRTEQTQLSRSLEKERQRASESRQEYLAIKEEA
AIQEGRAKQFEEEMKELRARHKEELQEAAEHRDLLEK(-)
						
					

						Sponge-miRNAs
						
							NA						
					

						circRNA-miRNA-mRNA network
						 VISUALIZATION
					

						Potential function description
						NA
					

			
		

Functional Information
Coding potential	Y
Potential coding position	69412859-69408529(+) 69412849-69407980(-)
Potential amino acid sequence	MISSFSFKRAAASLFLFCSLLSVSRSLVSAYTFSSRSLCSAASCSSSLCLALSSFISSSNCLAR PSCIAASSLIARYSCLLSDALCLSFSRDRLSCVCSVLRIVIWVSRTVIRDKLCDNLSFTDRSFS SEEAALASAS*(+) MAEGEELSKKQAAQEATIRKLRAQAWTRTLRYIREFEEEKQRLNSKIQVEEAKVESIKRDKAAT EKLLQETIERNQTELAAQKEFYTNALNAAKEAEALAEARVNSEAKIELENLLGEAGEKENMLIK TIEELRHFLTRQEQEAAFREKRLKGDYDDLQKRYQASELRYNELVTQVPESTRPLLRQIEAMQE TTARREDAWAGVERTLNSRLQEAEAKAASSEEKERSVNERLSQSLSRITVLETQITILRTEQTQ LSRSLEKERQRASESRQEYLAIKEEAAIQEGRAKQFEEEMKELRARHKEELQEAAEHRDLLEKV YALTKERDTLRREQNKKSDAAALLKEKDEIINQVMAEGEELSKKQAAQEATIRKLRAQAWTRTL RYIREFEEEKQRLNSKIQVEEAKVESIKRDKAATEKLLQETIERNQTELAAQKEFYTNALNAAK EAEALAEARVNSEAKIELENLLGEAGEKENMLIKTIEELRHFLTRQEQEAAFREKRLKGDYDDL QKRYQASELRYNELVTQVPESTRPLLRQIEAMQETTARREDAWAGVERTLNSRLQEAEAKAASS EEKERSVNERLSQSLSRITVLETQITILRTEQTQLSRSLEKERQRASESRQEYLAIKEEAAIQE GRAKQFEEEMKELRARHKEELQEAAEHRDLLEKVYALTKERDTLRREQNKKSDAAALLKEKDEI INQVMAEGEELSKKQAAQEATIRKLRAQAWTRTLRYIREFEEEKQRLNSKIQVEEAKVESIKRD KAATEKLLQETIERNQTELAAQKEFYTNALNAAKEAEALAEARVNSEAKIELENLLGEAGEKEN MLIKTIEELRHFLTRQEQEAAFREKRLKGDYDDLQKRYQASELRYNELVTQVPESTRPLLRQIE AMQETTARREDAWAGVERTLNSRLQEAEAKAASSEEKERSVNERLSQSLSRITVLETQITILRT EQTQLSRSLEKERQRASESRQEYLAIKEEAAIQEGRAKQFEEEMKELRARHKEELQEAAEHRDL LEKVYALTKERDTLRREQNKKSDAAALLKEKDEIINQVMAEGEELSKKQAAQEATIRKLRAQAW TRTLRYIREFEEEKQRLNSKIQVEEAKVESIKRDKAATEKLLQETIERNQTELAAQKEFYTNAL NAAKEAEALAEARVNSEAKIELENLLGEAGEKENMLIKTIEELRHFLTRQEQEAAFREKRLKGD YDDLQKRYQASELRYNELVTQVPESTRPLLRQIEAMQETTARREDAWAGVERTLNSRLQEAEAK AASSEEKERSVNERLSQSLSRITVLETQITILRTEQTQLSRSLEKERQRASESRQEYLAIKEEA AIQEGRAKQFEEEMKELRARHKEELQEAAEHRDLLEK(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Han et al., 2020

circRNA

Detail information of Zm00001d009541_circ_g.2

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