Welcome To the Browse Section of PscLncRNA.

In the Browse section, users can find all lincRNAs collected by PscLncRNA.

All lincRNAs in Oryza sativa

9773 lincRNAs identified in Oryza sativa

Entries from 25 to 30 of
total 9773,
page 5 of 1629.

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LincRNAID	Chr	Start	End	Strand	CellMarker	CisActing	TransActing
OSALNC000025	Syng_TIGR_014	516	2100	+	no	no	no
OSALNC000026	Syng_TIGR_014	8471	9934	+	no	no	no
OSALNC000027	Syng_TIGR_014	12697	13172	+	no	no	no
OSALNC000028	Syng_TIGR_014	16268	16643	+	no	no	no
OSALNC000029	Syng_TIGR_016	71	341	+	no	no	no
OSALNC000030	Syng_TIGR_021	7669	9406	-	no	no	no

lincRNA markers in Oryza sativa

204 lincRNA markers identified in Oryza sativa

Entries from 25 to 30 of
total 204,
page 5 of 34.

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LincRNAID	Chr	Start	End	Strand	CellMarker	CisActing	TransActing
OSALNC000940	1	34495662	34498582	-	yes	no	yes
OSALNC000950	1	34915838	34916379	+	yes	no	yes
OSALNC000955	1	35109215	35111392	-	yes	no	yes
OSALNC000957	1	35202891	35205669	-	yes	no	no
OSALNC000966	1	35464760	35465382	+	yes	no	yes
OSALNC000969	1	35518547	35524146	-	yes	no	yes

cis-acting lincRNAs in Oryza sativa

66 cis-acting lincRNAs identified in Oryza sativa

Entries from 25 to 30 of
total 66,
page 5 of 11.

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LincRNAID	Chr	Start	End	Strand	CellMarker	CisActing	TransActing
OSALNC003020	3	33519431	33520097	-	no	yes	no
OSALNC003557	4	20382730	20386900	+	yes	yes	no
OSALNC003702	4	26349470	26350160	+	no	yes	no
OSALNC003837	4	32605050	32605609	+	no	yes	no
OSALNC003849	4	33415316	33415634	-	yes	yes	yes
OSALNC003878	4	35211090	35213764	+	yes	yes	no

trans-acting lincRNAs in Oryza sativa

276 trans-acting lincRNAs identified in Oryza sativa

Entries from 25 to 30 of
total 276,
page 5 of 46.

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LincRNAID	Chr	Start	End	Strand	CellMarker	CisActing	TransActing
OSALNC000912	1	33501712	33505974	+	no	no	yes
OSALNC000916	1	33707426	33708111	+	yes	no	yes
OSALNC000918	1	33728308	33728550	+	no	no	yes
OSALNC000940	1	34495662	34498582	-	yes	no	yes
OSALNC000950	1	34915838	34916379	+	yes	no	yes
OSALNC000955	1	35109215	35111392	-	yes	no	yes

All lincRNAs in Arabidopsis thaliana

2719 lincRNAs identified in Arabidopsis thaliana

Entries from 25 to 30 of
total 2719,
page 5 of 454.

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LincRNAID	Chr	Start	End	Strand	CellMarker	CisActing	TransActing
ATHLNC000025	1	1194187	1196889	+	no	no	yes
ATHLNC000026	1	1299553	1299796	+	no	no	no
ATHLNC000027	1	1309793	1310299	-	no	no	no
ATHLNC000028	1	1422770	1423071	+	no	no	no
ATHLNC000029	1	1446835	1447073	+	no	no	no
ATHLNC000030	1	1461934	1462340	+	no	no	no

lincRNA markers in Arabidopsis thaliana

35 lincRNA markers identified in Arabidopsis thaliana

Entries from 25 to 30 of
total 35,
page 5 of 6.

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LincRNAID	Chr	Start	End	Strand	CellMarker	CisActing	TransActing
ATHLNC001902	4	4865590	4870379	+	yes	no	yes
ATHLNC001950	4	6668321	6671874	+	yes	no	yes
ATHLNC001972	4	7842947	7848999	+	yes	no	yes
ATHLNC002017	4	10578497	10580302	+	yes	no	yes
ATHLNC002048	4	12352488	12355254	+	yes	no	yes
ATHLNC002135	4	17280528	17282730	-	yes	no	yes

cis-acting lincRNAs in Arabidopsis thaliana

16 cis-acting lincRNAs identified in Arabidopsis thaliana

Entries from 25 to 16 of
total 16,
page 5 of 3.

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LincRNAID	Chr	Start	End	Strand	CellMarker	CisActing	TransActing

trans-acting lincRNAs in Arabidopsis thaliana

85 trans-acting lincRNAs identified in Arabidopsis thaliana

Entries from 25 to 30 of
total 85,
page 5 of 15.

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LincRNAID	Chr	Start	End	Strand	CellMarker	CisActing	TransActing
ATHLNC000729	2	1382278	1383713	-	no	no	yes
ATHLNC000773	2	2945814	2946605	+	no	no	yes
ATHLNC000804	2	4004573	4007116	-	yes	no	yes
ATHLNC000888	2	6392167	6393042	+	yes	no	yes
ATHLNC000910	2	6899042	6900611	+	no	yes	yes
ATHLNC000933	2	7598173	7603257	+	no	no	yes

All lincRNAs in Zea mays

10215 lincRNAs identified in Zea mays

Entries from 25 to 30 of
total 10215,
page 5 of 1703.

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LincRNAID	Chr	Start	End	Strand	CellMarker	CisActing	TransActing
ZMALNC000025	1	5121302	5121738	+	no	no	no
ZMALNC000026	1	5129773	5131418	+	no	no	no
ZMALNC000027	1	5134322	5136114	+	no	no	no
ZMALNC000028	1	5143232	5145027	+	no	no	yes
ZMALNC000029	1	5573655	5574027	+	no	no	no
ZMALNC000030	1	5594305	5594925	+	no	no	no

lincRNA markers in Zea mays

237 lincRNA markers identified in Zea mays

Entries from 25 to 30 of
total 237,
page 5 of 40.

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LincRNAID	Chr	Start	End	Strand	CellMarker	CisActing	TransActing
ZMALNC001058	1	219242683	219243831	-	yes	no	yes
ZMALNC001084	1	224650460	224650970	-	yes	no	yes
ZMALNC001131	1	234643216	234644742	+	yes	no	yes
ZMALNC001149	1	237747398	237768047	+	yes	no	yes
ZMALNC001198	1	247100088	247101524	-	yes	no	yes
ZMALNC001248	1	257829128	257830028	-	yes	no	yes

cis-acting lincRNAs in Zea mays

30 cis-acting lincRNAs identified in Zea mays

Entries from 25 to 30 of
total 30,
page 5 of 5.

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LincRNAID	Chr	Start	End	Strand	CellMarker	CisActing	TransActing
ZMALNC007584	6	166351138	166351529	+	no	yes	no
ZMALNC008161	7	119415828	119416801	+	no	yes	no
ZMALNC008377	7	164160334	164160955	-	no	yes	yes
ZMALNC008872	8	89550117	89552938	+	yes	yes	yes
ZMALNC009287	8	177287505	177288351	+	no	yes	no
ZMALNC009971	9	134087886	134088709	+	no	yes	yes

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trans-acting lincRNAs in Zea mays

431 trans-acting lincRNAs identified in Zea mays

Entries from 25 to 30 of
total 431,
page 5 of 72.

Pages:

LincRNAID	Chr	Start	End	Strand	CellMarker	CisActing	TransActing
ZMALNC000771	1	164222104	164225847	+	no	no	yes
ZMALNC000803	1	169188841	169192019	+	yes	no	yes
ZMALNC000810	1	170526362	170541399	-	yes	no	yes
ZMALNC000815	1	171230267	171234840	+	no	no	yes
ZMALNC000829	1	173560348	173580697	-	yes	no	yes
ZMALNC000861	1	179807148	179809514	-	no	no	yes

All lincRNAs in Solanum lycopersicum

6416 lincRNAs identified in Solanum lycopersicum

Entries from 25 to 30 of
total 6416,
page 5 of 1070.

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LincRNAID	Chr	Start	End	Strand	CellMarker	CisActing	TransActing
SLYLNC000025	SL4.0ch01	355381	356235	+	no	no	no
SLYLNC000026	SL4.0ch01	449405	453728	+	no	no	yes
SLYLNC000027	SL4.0ch01	554396	557521	+	no	no	no
SLYLNC000028	SL4.0ch01	564485	567084	-	no	no	no
SLYLNC000029	SL4.0ch01	834705	836710	-	no	no	no
SLYLNC000030	SL4.0ch01	876250	877209	+	no	no	no

lincRNA markers in Solanum lycopersicum

47 lincRNA markers identified in Solanum lycopersicum

Entries from 25 to 30 of
total 47,
page 5 of 8.

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LincRNAID	Chr	Start	End	Strand	CellMarker	CisActing	TransActing
SLYLNC004140	SL4.0ch08	42527852	42529600	+	yes	no	no
SLYLNC004325	SL4.0ch08	56405621	56406236	+	yes	no	yes
SLYLNC004336	SL4.0ch08	57294440	57296376	+	yes	no	yes
SLYLNC004338	SL4.0ch08	57434018	57434910	+	yes	yes	yes
SLYLNC004364	SL4.0ch08	60051124	60053999	+	yes	no	yes
SLYLNC004399	SL4.0ch08	63618300	63622947	+	yes	no	yes

cis-acting lincRNAs in Solanum lycopersicum

3 cis-acting lincRNAs identified in Solanum lycopersicum

Entries from 25 to 3 of
total 3,
page 5 of 1.

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LincRNAID	Chr	Start	End	Strand	CellMarker	CisActing	TransActing

trans-acting lincRNAs in Solanum lycopersicum

198 trans-acting lincRNAs identified in Solanum lycopersicum

Entries from 25 to 30 of
total 198,
page 5 of 33.

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LincRNAID	Chr	Start	End	Strand	CellMarker	CisActing	TransActing
SLYLNC001014	SL4.0ch02	30800348	30804566	+	no	no	yes
SLYLNC001026	SL4.0ch02	31841221	31844562	+	no	no	yes
SLYLNC001067	SL4.0ch02	34775329	34776776	+	no	no	yes
SLYLNC001081	SL4.0ch02	36729532	36731325	+	no	no	yes
SLYLNC001084	SL4.0ch02	36770141	36771206	-	no	no	yes
SLYLNC001087	SL4.0ch02	36833166	36834869	+	no	no	yes