Welcome To the Browse Section of PscLncRNA.

In the Browse section, users can find all lincRNAs collected by PscLncRNA.

All lincRNAs in Oryza sativa

9773 lincRNAs identified in Oryza sativa

Entries from 1 to 6 of
total 9773,
page 1 of 1629.

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LincRNAID	Chr	Start	End	Strand	CellMarker	CisActing	TransActing
OSALNC000001	AC155918	10544	11177	+	no	no	no
OSALNC000002	AC155918	17693	18611	+	no	no	no
OSALNC000003	AC155918	24998	25349	+	no	no	no
OSALNC000004	AC155918	26162	26465	+	no	no	no
OSALNC000005	AC156495	68593	73279	+	no	no	no
OSALNC000006	AC160949	1	4308	-	no	no	no

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lincRNA markers in Oryza sativa

204 lincRNA markers identified in Oryza sativa

Entries from 1 to 6 of
total 204,
page 1 of 34.

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LincRNAID	Chr	Start	End	Strand	CellMarker	CisActing	TransActing
OSALNC000231	1	8410681	8411883	+	yes	yes	no
OSALNC000242	1	8688899	8689797	-	yes	no	yes
OSALNC000253	1	9016289	9016581	+	yes	no	yes
OSALNC000327	1	12078128	12083021	-	yes	no	yes
OSALNC000331	1	12150251	12151422	+	yes	no	no
OSALNC000415	1	15402579	15404272	+	yes	yes	no

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cis-acting lincRNAs in Oryza sativa

66 cis-acting lincRNAs identified in Oryza sativa

Entries from 1 to 6 of
total 66,
page 1 of 11.

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LincRNAID	Chr	Start	End	Strand	CellMarker	CisActing	TransActing
OSALNC000088	1	2029671	2036247	+	no	yes	no
OSALNC000231	1	8410681	8411883	+	yes	yes	no
OSALNC000415	1	15402579	15404272	+	yes	yes	no
OSALNC000436	1	16132067	16132544	+	no	yes	no
OSALNC000636	1	23458595	23459317	+	no	yes	yes
OSALNC000859	1	31353925	31355440	+	no	yes	no

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trans-acting lincRNAs in Oryza sativa

276 trans-acting lincRNAs identified in Oryza sativa

Entries from 1 to 6 of
total 276,
page 1 of 46.

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LincRNAID	Chr	Start	End	Strand	CellMarker	CisActing	TransActing
OSALNC000072	1	1428510	1430319	-	no	no	yes
OSALNC000110	1	3379393	3379905	-	no	no	yes
OSALNC000222	1	8072630	8075278	+	no	no	yes
OSALNC000242	1	8688899	8689797	-	yes	no	yes
OSALNC000253	1	9016289	9016581	+	yes	no	yes
OSALNC000299	1	11409965	11410438	+	no	no	yes

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All lincRNAs in Arabidopsis thaliana

2719 lincRNAs identified in Arabidopsis thaliana

Entries from 1 to 6 of
total 2719,
page 1 of 454.

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LincRNAID	Chr	Start	End	Strand	CellMarker	CisActing	TransActing
ATHLNC000001	Mt	1317	3569	+	no	no	no
ATHLNC000002	Mt	4834	5147	+	no	no	no
ATHLNC000003	Mt	10032	10613	+	no	no	no
ATHLNC000004	Mt	184049	184841	+	no	no	no
ATHLNC000005	Mt	194707	195282	+	no	no	no
ATHLNC000006	1	11101	11372	+	no	no	no

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lincRNA markers in Arabidopsis thaliana

35 lincRNA markers identified in Arabidopsis thaliana

Entries from 1 to 6 of
total 35,
page 1 of 6.

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LincRNAID	Chr	Start	End	Strand	CellMarker	CisActing	TransActing
ATHLNC000254	1	11580996	11585344	-	yes	no	yes
ATHLNC000282	1	12380420	12385988	-	yes	no	yes
ATHLNC000288	1	12582074	12583158	+	yes	no	no
ATHLNC000309	1	13145609	13146865	+	yes	no	yes
ATHLNC000445	1	17295034	17296327	+	yes	no	no
ATHLNC000455	1	17580421	17589513	+	yes	no	yes

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cis-acting lincRNAs in Arabidopsis thaliana

16 cis-acting lincRNAs identified in Arabidopsis thaliana

Entries from 1 to 6 of
total 16,
page 1 of 3.

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LincRNAID	Chr	Start	End	Strand	CellMarker	CisActing	TransActing
ATHLNC000156	1	7765923	7766864	+	no	yes	no
ATHLNC000159	1	7907855	7910456	-	no	yes	yes
ATHLNC000548	1	22929149	22930885	-	no	yes	yes
ATHLNC000601	1	25424487	25425704	-	no	yes	no
ATHLNC000615	1	26036531	26037685	+	yes	yes	yes
ATHLNC000690	1	29648024	29649951	-	yes	yes	yes

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trans-acting lincRNAs in Arabidopsis thaliana

85 trans-acting lincRNAs identified in Arabidopsis thaliana

Entries from 1 to 6 of
total 85,
page 1 of 15.

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LincRNAID	Chr	Start	End	Strand	CellMarker	CisActing	TransActing
ATHLNC000025	1	1194187	1196889	+	no	no	yes
ATHLNC000031	1	1479756	1481025	-	no	no	yes
ATHLNC000089	1	4583155	4585902	+	no	no	yes
ATHLNC000159	1	7907855	7910456	-	no	yes	yes
ATHLNC000254	1	11580996	11585344	-	yes	no	yes
ATHLNC000273	1	12196760	12200842	-	no	no	yes

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All lincRNAs in Zea mays

10215 lincRNAs identified in Zea mays

Entries from 1 to 6 of
total 10215,
page 1 of 1703.

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LincRNAID	Chr	Start	End	Strand	CellMarker	CisActing	TransActing
ZMALNC000001	1	40140	40412	+	no	no	no
ZMALNC000002	1	129130	137796	-	no	no	no
ZMALNC000003	1	154992	155692	+	no	no	no
ZMALNC000004	1	180531	180776	-	no	no	no
ZMALNC000005	1	207322	207716	+	no	no	no
ZMALNC000006	1	324765	326832	+	no	no	no

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lincRNA markers in Zea mays

237 lincRNA markers identified in Zea mays

Entries from 1 to 6 of
total 237,
page 1 of 40.

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LincRNAID	Chr	Start	End	Strand	CellMarker	CisActing	TransActing
ZMALNC000115	1	15641052	15654839	+	yes	no	yes
ZMALNC000139	1	20007824	20021396	+	yes	yes	yes
ZMALNC000189	1	30612178	30614643	+	yes	no	no
ZMALNC000309	1	53229330	53235060	+	yes	no	no
ZMALNC000364	1	65347561	65376116	-	yes	no	no
ZMALNC000418	1	78722538	78725321	-	yes	no	no

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cis-acting lincRNAs in Zea mays

30 cis-acting lincRNAs identified in Zea mays

Entries from 1 to 6 of
total 30,
page 1 of 5.

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LincRNAID	Chr	Start	End	Strand	CellMarker	CisActing	TransActing
ZMALNC000111	1	15370138	15375438	-	no	yes	no
ZMALNC000139	1	20007824	20021396	+	yes	yes	yes
ZMALNC000854	1	178715760	178716473	-	no	yes	no
ZMALNC000950	1	195612188	195616201	-	yes	yes	no
ZMALNC001007	1	209164785	209165799	+	no	yes	yes
ZMALNC001018	1	211337641	211384294	+	yes	yes	yes

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trans-acting lincRNAs in Zea mays

431 trans-acting lincRNAs identified in Zea mays

Entries from 1 to 6 of
total 431,
page 1 of 72.

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LincRNAID	Chr	Start	End	Strand	CellMarker	CisActing	TransActing
ZMALNC000028	1	5143232	5145027	+	no	no	yes
ZMALNC000071	1	10490592	10491576	+	no	no	yes
ZMALNC000108	1	15076033	15077680	-	no	no	yes
ZMALNC000115	1	15641052	15654839	+	yes	no	yes
ZMALNC000139	1	20007824	20021396	+	yes	yes	yes
ZMALNC000215	1	34922133	34922569	-	no	no	yes

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All lincRNAs in Solanum lycopersicum

6416 lincRNAs identified in Solanum lycopersicum

Entries from 1 to 6 of
total 6416,
page 1 of 1070.

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LincRNAID	Chr	Start	End	Strand	CellMarker	CisActing	TransActing
SLYLNC000001	SL4.0ch00	17768	19411	+	no	no	no
SLYLNC000002	SL4.0ch00	264400	272088	+	no	no	no
SLYLNC000003	SL4.0ch00	420232	420438	+	no	no	no
SLYLNC000004	SL4.0ch00	690923	691261	+	no	no	no
SLYLNC000005	SL4.0ch00	1259345	1264455	-	no	no	no
SLYLNC000006	SL4.0ch00	2142255	2142481	+	no	no	no

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lincRNA markers in Solanum lycopersicum

47 lincRNA markers identified in Solanum lycopersicum

Entries from 1 to 6 of
total 47,
page 1 of 8.

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LincRNAID	Chr	Start	End	Strand	CellMarker	CisActing	TransActing
SLYLNC000132	SL4.0ch01	10337861	10339828	+	yes	no	yes
SLYLNC000140	SL4.0ch01	11671108	11680050	-	yes	no	yes
SLYLNC000223	SL4.0ch01	22490991	22494032	+	yes	no	yes
SLYLNC000450	SL4.0ch01	59283608	59286563	-	yes	no	yes
SLYLNC000556	SL4.0ch01	68023175	68026602	+	yes	no	yes
SLYLNC000669	SL4.0ch01	81264663	81266456	+	yes	no	yes

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cis-acting lincRNAs in Solanum lycopersicum

3 cis-acting lincRNAs identified in Solanum lycopersicum

Entries from 1 to 3 of
total 3,
page 1 of 1.

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LincRNAID	Chr	Start	End	Strand	CellMarker	CisActing	TransActing
SLYLNC003956	SL4.0ch08	7360312	7360625	+	yes	yes	yes
SLYLNC004338	SL4.0ch08	57434018	57434910	+	yes	yes	yes
SLYLNC005203	SL4.0ch10	40460156	40465014	-	no	yes	yes

trans-acting lincRNAs in Solanum lycopersicum

198 trans-acting lincRNAs identified in Solanum lycopersicum

Entries from 1 to 6 of
total 198,
page 1 of 33.

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LincRNAID	Chr	Start	End	Strand	CellMarker	CisActing	TransActing
SLYLNC000026	SL4.0ch01	449405	453728	+	no	no	yes
SLYLNC000097	SL4.0ch01	6702352	6702783	+	no	no	yes
SLYLNC000132	SL4.0ch01	10337861	10339828	+	yes	no	yes
SLYLNC000140	SL4.0ch01	11671108	11680050	-	yes	no	yes
SLYLNC000217	SL4.0ch01	21959218	21962218	-	no	no	yes
SLYLNC000223	SL4.0ch01	22490991	22494032	+	yes	no	yes

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