Welcome To the Browse Section of PscLncRNA.

In the Browse section, users can find all lincRNAs collected by PscLncRNA.

All lincRNAs in Oryza sativa

9773 lincRNAs identified in Oryza sativa
  • Entries from 7 to 12 of
  • total 9773,
  • page 2 of 1629.
  • Pages:
LincRNAID
Chr
Start
End
Strand
CellMarker
CisActing
TransActing

OSALNC000007

AC160949

29349

30287

-

no

no

no

OSALNC000008

AC160949

90424

91162

-

no

no

no

OSALNC000009

AC160949

94130

94610

-

no

no

no

OSALNC000010

AP008246

164893

166103

-

no

no

no

OSALNC000011

AP008246

166167

166592

+

no

no

no

OSALNC000012

AP008246

174449

174730

-

no

no

no

lincRNA markers in Oryza sativa

204 lincRNA markers identified in Oryza sativa
  • Entries from 7 to 12 of
  • total 204,
  • page 2 of 34.
  • Pages:
LincRNAID
Chr
Start
End
Strand
CellMarker
CisActing
TransActing

OSALNC000427

1

15878074

15881088

-

yes

no

no

OSALNC000501

1

18347703

18349425

-

yes

no

yes

OSALNC000512

1

18723723

18731107

-

yes

no

yes

OSALNC000564

1

20769259

20775651

-

yes

no

yes

OSALNC000567

1

20849819

20852754

+

yes

no

no

OSALNC000602

1

22029715

22034964

-

yes

no

yes

cis-acting lincRNAs in Oryza sativa

66 cis-acting lincRNAs identified in Oryza sativa
  • Entries from 7 to 12 of
  • total 66,
  • page 2 of 11.
  • Pages:
LincRNAID
Chr
Start
End
Strand
CellMarker
CisActing
TransActing

OSALNC000899

1

32883003

32885770

-

yes

yes

yes

OSALNC000919

1

33764737

33765304

+

no

yes

no

OSALNC001231

2

4015894

4023138

+

yes

yes

yes

OSALNC001454

2

12405746

12406241

+

no

yes

no

OSALNC001512

2

13610640

13621005

+

yes

yes

yes

OSALNC001689

2

18533180

18535403

-

no

yes

no

trans-acting lincRNAs in Oryza sativa

276 trans-acting lincRNAs identified in Oryza sativa
  • Entries from 7 to 12 of
  • total 276,
  • page 2 of 46.
  • Pages:
LincRNAID
Chr
Start
End
Strand
CellMarker
CisActing
TransActing

OSALNC000327

1

12078128

12083021

-

yes

no

yes

OSALNC000338

1

12301513

12302580

+

no

no

yes

OSALNC000442

1

16295398

16301099

-

no

no

yes

OSALNC000501

1

18347703

18349425

-

yes

no

yes

OSALNC000512

1

18723723

18731107

-

yes

no

yes

OSALNC000543

1

19691871

19693903

+

no

no

yes

All lincRNAs in Arabidopsis thaliana

2719 lincRNAs identified in Arabidopsis thaliana
  • Entries from 7 to 12 of
  • total 2719,
  • page 2 of 454.
  • Pages:
LincRNAID
Chr
Start
End
Strand
CellMarker
CisActing
TransActing

ATHLNC000007

1

21357

21987

+

no

no

no

ATHLNC000008

1

43087

43295

-

no

no

no

ATHLNC000009

1

81306

82026

+

no

no

no

ATHLNC000010

1

238425

239436

+

no

no

no

ATHLNC000011

1

255022

255384

+

no

no

no

ATHLNC000012

1

258717

258963

-

no

no

no

lincRNA markers in Arabidopsis thaliana

35 lincRNA markers identified in Arabidopsis thaliana
  • Entries from 7 to 12 of
  • total 35,
  • page 2 of 6.
  • Pages:
LincRNAID
Chr
Start
End
Strand
CellMarker
CisActing
TransActing

ATHLNC000485

1

19390785

19393537

+

yes

no

yes

ATHLNC000487

1

19496461

19498071

+

yes

no

yes

ATHLNC000522

1

21645642

21647228

+

yes

no

no

ATHLNC000530

1

22076533

22077193

-

yes

no

yes

ATHLNC000615

1

26036531

26037685

+

yes

yes

yes

ATHLNC000690

1

29648024

29649951

-

yes

yes

yes

cis-acting lincRNAs in Arabidopsis thaliana

16 cis-acting lincRNAs identified in Arabidopsis thaliana
  • Entries from 7 to 12 of
  • total 16,
  • page 2 of 3.
  • Pages:
LincRNAID
Chr
Start
End
Strand
CellMarker
CisActing
TransActing

ATHLNC000910

2

6899042

6900611

+

no

yes

yes

ATHLNC001260

3

5837834

5839409

+

yes

yes

yes

ATHLNC001374

3

10963723

10967352

-

no

yes

yes

ATHLNC001586

3

16311631

16314301

+

no

yes

yes

ATHLNC001615

3

17169402

17171044

-

no

yes

yes

ATHLNC001713

3

22075815

22078361

-

no

yes

yes

trans-acting lincRNAs in Arabidopsis thaliana

85 trans-acting lincRNAs identified in Arabidopsis thaliana
  • Entries from 7 to 12 of
  • total 85,
  • page 2 of 15.
  • Pages:
LincRNAID
Chr
Start
End
Strand
CellMarker
CisActing
TransActing

ATHLNC000282

1

12380420

12385988

-

yes

no

yes

ATHLNC000309

1

13145609

13146865

+

yes

no

yes

ATHLNC000338

1

13838380

13841661

-

no

no

yes

ATHLNC000452

1

17498909

17499296

+

no

no

yes

ATHLNC000455

1

17580421

17589513

+

yes

no

yes

ATHLNC000482

1

19233219

19234416

-

no

no

yes

All lincRNAs in Zea mays

10215 lincRNAs identified in Zea mays
  • Entries from 7 to 12 of
  • total 10215,
  • page 2 of 1703.
  • Pages:
LincRNAID
Chr
Start
End
Strand
CellMarker
CisActing
TransActing

ZMALNC000007

1

440988

441207

+

no

no

no

ZMALNC000008

1

572435

572663

+

no

no

no

ZMALNC000009

1

687699

688099

+

no

no

no

ZMALNC000010

1

862994

864972

-

no

no

no

ZMALNC000011

1

1487614

1489497

-

no

no

no

ZMALNC000012

1

1540407

1540586

-

no

no

no

lincRNA markers in Zea mays

237 lincRNA markers identified in Zea mays
  • Entries from 7 to 12 of
  • total 237,
  • page 2 of 40.
  • Pages:
LincRNAID
Chr
Start
End
Strand
CellMarker
CisActing
TransActing

ZMALNC000526

1

107330276

107333842

-

yes

no

yes

ZMALNC000541

1

109554017

109560273

-

yes

no

yes

ZMALNC000573

1

118636279

118649339

-

yes

no

no

ZMALNC000590

1

121924743

121927673

+

yes

no

no

ZMALNC000685

1

150698937

150721049

-

yes

no

no

ZMALNC000714

1

155053218

155055904

-

yes

no

no

cis-acting lincRNAs in Zea mays

30 cis-acting lincRNAs identified in Zea mays
  • Entries from 7 to 12 of
  • total 30,
  • page 2 of 5.
  • Pages:
LincRNAID
Chr
Start
End
Strand
CellMarker
CisActing
TransActing

ZMALNC001159

1

240238330

240238872

+

no

yes

yes

ZMALNC001161

1

240375385

240376576

-

no

yes

no

ZMALNC002110

10

139366097

139366297

+

no

yes

yes

ZMALNC002877

2

137856971

137858359

+

yes

yes

no

ZMALNC003098

2

186189803

186190391

+

yes

yes

no

ZMALNC003544

3

27392502

27397463

-

no

yes

yes

trans-acting lincRNAs in Zea mays

431 trans-acting lincRNAs identified in Zea mays
  • Entries from 7 to 12 of
  • total 431,
  • page 2 of 72.
  • Pages:
LincRNAID
Chr
Start
End
Strand
CellMarker
CisActing
TransActing

ZMALNC000219

1

35601537

35609433

-

no

no

yes

ZMALNC000237

1

40009612

40034737

-

no

no

yes

ZMALNC000291

1

50879624

50881589

+

no

no

yes

ZMALNC000295

1

52090152

52104897

-

no

no

yes

ZMALNC000367

1

65544647

65544902

+

no

no

yes

ZMALNC000413

1

77688542

77690077

+

no

no

yes

All lincRNAs in Solanum lycopersicum

6416 lincRNAs identified in Solanum lycopersicum
  • Entries from 7 to 12 of
  • total 6416,
  • page 2 of 1070.
  • Pages:
LincRNAID
Chr
Start
End
Strand
CellMarker
CisActing
TransActing

SLYLNC000007

SL4.0ch00

2192936

2194524

+

no

no

no

SLYLNC000008

SL4.0ch00

2689644

2689850

-

no

no

no

SLYLNC000009

SL4.0ch00

2820747

2846332

-

no

no

no

SLYLNC000010

SL4.0ch00

3640183

3640434

+

no

no

no

SLYLNC000011

SL4.0ch00

3731748

3733222

+

no

no

no

SLYLNC000012

SL4.0ch00

4518494

4519536

+

no

no

no

lincRNA markers in Solanum lycopersicum

47 lincRNA markers identified in Solanum lycopersicum
  • Entries from 7 to 12 of
  • total 47,
  • page 2 of 8.
  • Pages:
LincRNAID
Chr
Start
End
Strand
CellMarker
CisActing
TransActing

SLYLNC000745

SL4.0ch01

88765394

88766909

+

yes

no

yes

SLYLNC001150

SL4.0ch02

42387975

42389723

-

yes

no

no

SLYLNC001170

SL4.0ch02

43756790

43759210

+

yes

no

yes

SLYLNC001737

SL4.0ch03

58859843

58861094

+

yes

no

yes

SLYLNC001747

SL4.0ch03

59502992

59503610

+

yes

no

yes

SLYLNC001784

SL4.0ch03

62179412

62181489

+

yes

no

no

cis-acting lincRNAs in Solanum lycopersicum

3 cis-acting lincRNAs identified in Solanum lycopersicum
  • Entries from 7 to 3 of
  • total 3,
  • page 2 of 1.
  • Pages:
LincRNAID
Chr
Start
End
Strand
CellMarker
CisActing
TransActing

trans-acting lincRNAs in Solanum lycopersicum

198 trans-acting lincRNAs identified in Solanum lycopersicum
  • Entries from 7 to 12 of
  • total 198,
  • page 2 of 33.
  • Pages:
LincRNAID
Chr
Start
End
Strand
CellMarker
CisActing
TransActing

SLYLNC000236

SL4.0ch01

24355437

24358606

+

no

no

yes

SLYLNC000248

SL4.0ch01

25867514

25869867

+

no

no

yes

SLYLNC000267

SL4.0ch01

29994665

29996405

+

no

no

yes

SLYLNC000289

SL4.0ch01

33595338

33597842

+

no

no

yes

SLYLNC000380

SL4.0ch01

50832627

50834890

+

no

no

yes

SLYLNC000403

SL4.0ch01

54303381

54307316

+

no

no

yes