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Download data from PlantscRNAdb
Download marker genes
Totally 114,770 marker genes from fifteen species. (All marker genes could be download from here.)
No.12 columns of the marker gene list are from spatial reidentified genes (including marker class) and No.13 columns of the marker gene list are from single-cell reidentification (including marker class)，if you want to know more about them,you can download here.)
Format of downloaded file (marker gene information) could be found here.
Download expression matrix
Format of expression matrix file could be found here.
| Dataset | Description | Download link |
|---|---|---|
| GSE114615 | Root tissue of Arabidopsis thaliana | GSE114615.zip |
| GSE121619 | Arabidopsis root tissue under control and heat treatment | GSE121619.zip |
| GSE122687 | Arabidopsis root tissue under control and sucrose treatment | GSE122687.zip |
| GSE123013 | Root tissue of two Arabidopsis mutants(gl2 and rhd6) and wild-type | GSE123013.zip |
| GSE123818 | Root tissue of one Arabidopsis mutants(shr) and wild-type | GSE123818.zip |
| GSE141730 | Root tissue of Arabidopsis | GSE141730.zip |
| PRJNA577177 | Cotyledons of 5-day-old Arabidopsis seedlings | PRJNA577177.zip |
| GSE146035 | Root tips of two agronomically important rice cultivars (9311 and Nipponbare) | GSE146035.zip |
| GSE161482 | Leaf tissue of Arabidopsis | GSE161482.zip |
| PRJNA646989 & PRJNA646996 & PRJNA647001 |
Maize ears | PRJNA646989_ PRJNA646996_ PRJNA647001.zip |
| GSE155304 | Root tissue of Arabidopsis | GSE155304.zip |
| PRJNA703045 | Whole aerial tissue or first true leaves tissue of Arabidopsis thaliana | PRJNA703045.zip |
| PRJNA666436 | Lateral root tissue of Arabidopsis thaliana | PRJNA666436.zip |
| PRJNA640389 | Root tissue of Arabidopsis thaliana | PRJNA640389.zip |
| PRJNA594539 | Root tissue of Arabidopsis thaliana | PRJNA594539.zip |
| PRJNA509920 | Root tissue of Arabidopsis thaliana | PRJNA509920.zip |
| PRJNA497883 | Root tissue of Arabidopsis thaliana | PRJNA497883.zip |
| PRJNA507252 | Root tissue of Arabidopsis thaliana | PRJNA507252.zip |
| PRJNA506007 | Root tissue of Arabidopsis thaliana | PRJNA506007.zip |
| PRJNA471914 | Root tissue of Arabidopsis thaliana | PRJNA471914.zip |
| PRJNA517021 | Root tissue of Arabidopsis thaliana | PRJNA517021.zip |
| PRJNA754157 | Root tissue of Arabidopsis thaliana | PRJNA754157.zip |
| PRJNA660263 | Seed tissue of Arabidopsis thaliana | PRJNA660263.zip |
| PRJNA490038 | Female gametic cells of Arabidopsis thaliana | PRJNA490038.zip |
| E-MTAB-9174 | Root; Leaf; Flower; Silique; Stem tissue of Arabidopsis thaliana | E-MTAB-9174.zip |
| PRJNA664874 | Root/embryo tissue of Arabidopsis thaliana | PRJNA664874.zip |
| PRJNA649267 | Root tissue of Arabidopsis thaliana | PRJNA649267.zip |
| PRJNA678377 | Leaf tissue of Arabidopsis thaliana | PRJNA678377.zip |
| PRJCA003094 | Vegetative shoot apex tissue of Arabidopsis thaliana | PRJCA003094.zip |
| PRJNA716169 | Embryo tissue of Arabidopsis thaliana | PRJNA716169.zip |
| PRJNA680241 | Lateral root tissue of Arabidopsis thaliana | PRJNA680241.zip |
| PRJNA648028 | Leaf tissue of Arabidopsis thaliana | PRJNA648028.zip |
| CNP0002618 | Leaf tissue of Arabidopsis thaliana | CNP0002618.zip |
| PRJNA764868 | Leaf tissue of Arabidopsis thaliana | PRJNA764868.zip |
| PRJNA750934 | Root tissue of Arabidopsis thaliana | PRJNA750934.zip |
| GSE156991 | Root callus tissue of Arabidopsis thaliana | GSE156991.zip |
| PRJNA613684 | Leaf tissue of Arabidopsis thaliana | PRJNA613684.zip |
| PRJEB47244 | Ovule primordia tissue of Arabidopsis thaliana | PRJEB47244.zip |
| PRJNA742744 | Shoot, root tissue of Arabidopsis thaliana | PRJNA742744.zip |
| E-MTAB-11006 | Seedling tissue of Arabidopsis thaliana | E-MTAB-11006.zip |
| PRJNA835893 | Developing male gametophytes of Arabidopsis thaliana | PRJNA835893.zip |
| PRJNA730707 | Floral meristem of Arabidopsis thaliana | PRJNA730707.zip |
| PRJNA551314 | Cotyledon of Arabidopsis thaliana | PRJNA551314.zip |
| PRJNA637882 | Shoot apical tissue of Zea mays | PRJNA637882.zip |
| GSE121039 | Anther tissue of Zea mays | GSE121039.zip |
| PRJNA662627 | Leaf tissue of Zea mays | PRJNA662627.zip |
| PRJNA648930 | Seedling tissue of Zea mays | PRJNA648930.zip |
| GSE173087 | Root tissue of Zea mays | GSE173087.zip |
| PRJNA576240 | Leaf tissue of Zea mays | PRJNA576240.zip |
| PRJNA759548 | Root tissue of Zea mays | PRJNA759548.zip |
| PRJNA740934 | Leaf tissue of Zea mays | PRJNA740934.zip |
| PRJNA760550 | Anther of Zea mays | PRJNA760550.zip |
| PRJNA609092 | Root tissue of Oryza sativa | PRJNA609092.zip |
| PRJNA706435 | Root tissue of Oryza sativa | PRJNA706435.zip |
| CRA004082 | Leaf, Root tissue of Oryza sativa | CRA004082.zip |
| PRJNA767589 | Inflorescence tissue of Oryza sativa | PRJNA767589.zip |
| PRJNA661700 | Shoot apex tissue of Solanum lycopersicum | PRJNA661700.zip |
| PRJNA667489 | Shoot borne root tissue of Solanum lycopersicum | PRJNA667489.zip |
| PRJCA005543 | Stem tissue of Populus alba | PRJCA005543.zip |
| PRJNA703312 | Shoot tissue of Populus alba x Populus glandulosa | PRJNA703312.zip |
| PRJNA787915 | Vegetative shoot apex of Populus | PRJNA787915.zip |
| CRA004848 | Leaf tissue of Fragaria vesca | CRA004848.zip |
| SAMN19243672 | Whole plant of Lemna minuta | SAMN19243672.zip |
| PRJNA796301 | Corolla tissue of Nicotiana attenuata | PRJNA796301.zip |
| PRJNA009630 | Leaf tissue of Brassica rapa | PRJNA009630.zip |
| PRJNA013085 | Shoot apex of Brassica rapa | PRJNA013085.zip |
| PRJNA662042 | Chlamydomonas cell populations under three environments and in two genotypes | PRJNA662042.zip |
| PRJNA600131 | Ovule of Gossypium hirsutum | PRJNA600131.zip |
| PRJCA012129 | Root tissue of Medicago truncatula | PRJCA012129.zip |
| PRJNA868047 | Root tissue of Medicago truncatula | PRJNA868047.zip |
| PRJNA895163 | Tuberous root of cassava | PRJNA895163.zip |
| PRJNA743551 | Leaf of Nepeta tenuifolia | PRJNA743551.zip |
| PRJCA009893 | Nodules of Glycine max | PRJCA009893.zip |
| PRJNA813957 | Flower of Phalaenopsis aphrodite | PRJNA813957.zip |
| Our unpublished data | The embryo of rice | Coming soon |