Detailed information



Ocimum basilicum


Accession name :JAVHNJ000000000


Basic information


Ploidy Order Family Clade APG_IV
NA Lamiales Lamiaceae Asterids Core eudicots


Genomic features


Estimated genome size(Mb) Assembled genome size(Mb) Predicted gene number Scaffold N50 size(Kb) Contig N50 size(Kb)
NA 2200 91956 NA 10600


Sequencing platform & Assembly tool


Sequencing platform Platform classification If use HiC for scaffolding Software of contig assembly Software of polishing Software of scaffolding Software of HiC scaffolding
PacBio
HiFi yes HiFiasm
Pilon
3D-DNA
3D-DNA


Published article


Publish year Publication PMID or DOI Country or Institution
2025/1/27 The Plant Journal 10.1111/tpj.17224 USA


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