Detailed information



Ochroma pyramidale


Accession name :balsa


Basic information


Ploidy Order Family Clade APG_IV
NA Malvales Malvaceae Rosids Core eudicots


Genomic features


Estimated genome size(Mb) Assembled genome size(Mb) Predicted gene number Scaffold N50 size(Kb) Contig N50 size(Kb)
1822.57 1790 53515 NA 26340


Sequencing platform & Assembly tool


Sequencing platform Platform classification If use HiC for scaffolding Software of contig assembly Software of polishing Software of scaffolding Software of HiC scaffolding
ONT
ONT yes Nextdenovo
Nextpolish
3D-DNA
juicer
3D-DNA


Published article


Publish year Publication PMID or DOI Country or Institution
2024/4/3 PNAS 10.1073/pnas.2313921121 China


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