Detailed information



Theobroma cacao


Accession name ：Matina 1-6


Basic information


Ploidy Order Family Clade APG_IV
diploid Malvales Malvaceae Rosids Core eudicots


Genomic features


Estimated genome size(Mb) Assembled genome size(Mb) Predicted gene number Scaffold N50 size(Kb) Contig N50 size(Kb)
445 346 29408 34400 84.4


Sequencing platform & Assembly tool


Sequencing platform Platform classification If use HiC for scaffolding Software of contig assembly Software of polishing Software of scaffolding Software of HiC scaffolding
454
Illumina
Sanger
 		NGS no Arachne
 		NA
 		NA
 		NA


Published article


Publish year Publication PMID or DOI Country or Institution
2013 Genome Biology 23731509 USA


Download links


Genome assembly Annotation




Please contact Fan's lab, 12216008@zju.edu.cn

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