Detailed information



Acorus gramineus


Accession name :JQP20200401GX


Basic information


Ploidy Order Family Clade APG_IV
diploid Acorales Acoraceae Acorales Monocots


Genomic features


Estimated genome size(Mb) Assembled genome size(Mb) Predicted gene number Scaffold N50 size(Kb) Contig N50 size(Kb)
391.2 399.8 23207 36500 12000


Sequencing platform & Assembly tool


Sequencing platform Platform classification If use HiC for scaffolding Software of contig assembly Software of polishing Software of scaffolding Software of HiC scaffolding
PacBio
ONT
BGI
HiFi yes NextDenovo
Hifiasm
Nextpolish
3D-DNA
3D-DNA


Published article


Publish year Publication PMID or DOI Country or Institution
2023 Nature Communications 10.1038/s41467-023-38836-4 China


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