Detailed information



Niphotrichum japonicum


Accession name :NA


Basic information


Ploidy Order Family Clade APG_IV
NA Grimmiales Grimmiaceae Mosses Bryophytes


Genomic features


Estimated genome size(Mb) Assembled genome size(Mb) Predicted gene number Scaffold N50 size(Kb) Contig N50 size(Kb)
184.22 191.608406 26898 14234.889 6604.031


Sequencing platform & Assembly tool


Sequencing platform Platform classification If use HiC for scaffolding Software of contig assembly Software of polishing Software of scaffolding Software of HiC scaffolding
ONT
Illumina
Other TGS yes NextDenovo
Nextpolish
Pilon
3D-DNA
ALLHIC
3D-DNA
ALLHIC


Published article


Publish year Publication PMID or DOI Country or Institution
2023 Frontiers in Plant Science 10.3389/fpls.2023.1271357 China


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