Detailed information
Accession name :NA
Genomic features
Estimated genome size(Mb) | Assembled genome size(Mb) | Predicted gene number | Scaffold N50 size(Kb) | Contig N50 size(Kb) |
---|---|---|---|---|
184.22 | 191.608406 | 26898 | 14234.889 | 6604.031 |
Sequencing platform & Assembly tool
Sequencing platform | Platform classification | If use HiC for scaffolding | Software of contig assembly | Software of polishing | Software of scaffolding | Software of HiC scaffolding |
---|---|---|---|---|---|---|
ONT Illumina |
Other TGS | yes |
NextDenovo |
Nextpolish Pilon |
3D-DNA ALLHIC |
3D-DNA ALLHIC |
Published article
Publish year | Publication | PMID or DOI | Country or Institution |
---|---|---|---|
2023 | Frontiers in Plant Science | 10.3389/fpls.2023.1271357 | China |