Detailed information



Citrus sinensis


Accession name :V4.0


Basic information


Ploidy Order Family Clade APG_IV
diploid Sapindales Rutaceae Rosids Core eudicots


Genomic features


Estimated genome size(Mb) Assembled genome size(Mb) Predicted gene number Scaffold N50 size(Kb) Contig N50 size(Kb)
367 337 29875 32314 24200


Sequencing platform & Assembly tool


Sequencing platform Platform classification If use HiC for scaffolding Software of contig assembly Software of polishing Software of scaffolding Software of HiC scaffolding
PacBio
ONT
Illumina
Other TGS yes HGAP
Necat
Pilon
Racon
Nextpolish
SSPACE
3D-DNA
3D-DNA


Published article


Publish year Publication PMID or DOI Country or Institution
2021/6/17 Nature Plants 10.1038/s41477-021-00941-x China


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