Detailed information



Citrus sinensis


Accession name :Valencia


Basic information


Ploidy Order Family Clade APG_IV
diploid Sapindales Rutaceae Rosids Core eudicots


Genomic features


Estimated genome size(Mb) Assembled genome size(Mb) Predicted gene number Scaffold N50 size(Kb) Contig N50 size(Kb)
367 311.97 NA 28944.50 272.44


Sequencing platform & Assembly tool


Sequencing platform Platform classification If use HiC for scaffolding Software of contig assembly Software of polishing Software of scaffolding Software of HiC scaffolding
PacBio
Illumina
Other TGS no NextDenovo
Racon
Nextpolish
RaGOO
NA


Published article


Publish year Publication PMID or DOI Country or Institution
2021/6/17 Nature Plants 10.1038/s41477-021-00941-x China


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