Phenotype Prediction

The module offers predictions for grain length and width of rice, which can be easily done by uploading the feature files extracted by GSCtool


Model Performance

Traits R2 MAE r
Panicle Number per Plant (num) 0.83 2.90 0.91
Plant Height (cm) 0.59 11.03 0.77
Grain Length 0.52 0.55 0.72
Grain Width 0.63 0.19 0.79

Note: R2: coefficient of determination, MAE: mean absolute error, and r: pearson correlation coefficient.

Prediction for Grain width and length of rice

Upload GSCtool feature file with sample name, which are identified by the column named "sample".Download Example File