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Qi GA, Zheng YT, Lin F, Huang X , Duan LW, You Y, Liu HL, Wang Y,
Xu HM, Chen GB
. (2021). EigenGWAS: An online visualizing and interactive application for detecting genomic signatures of natural selection.
Molecular Ecology Resources
, 21(5): 1732-1744..
Lin F, Qi GA, Xu T, Lou XY, Hong YB,
Xu HM
. (2020). Joint association analysis method to dissect complex genetic architecture of multiple genetically related traits.
The Crop Journal
, 8(5): 733-744.
Xu T, Md. Mamun Monir, Lou XY,
Xu HM, Zhu J
. (2020). Conditional and unconditional genome‑wide association study reveal complicate genetic architecture of human body weight and impacts of smoking.
Scientific Reports
, 10:12136.
Md. Alamin, Most. Humaira Sultana,
Xu HM
, Md. Nurul Haque Mollah. (2020). Robustification of linear regression and its application in genome-wide association studies.
Frontiers in Genetics
, 11: 549.
Hou TT, Lin F, Bai S,, Cleves M,
Xu HM, Lou XY
. (2019). Generalized multifactor dimensionality reduction approaches to identification of genetic interactions underlying ordinal traits.
Genetic Epidemiology
, 43:24–36.
Qi T, Cao YJ, Cao LY, Gao YM, Zhu SJ, Lou XY,
Xu HM
. (2015). Dissecting genetic architecture underlying seed traits in multiple environments.
Genetics
, 199: 61-71.
Jia Y. H., Sun X. W., Sun J. L., Pan Z. E., Wang X. W. 1, He S. P., Xiao S. H., Shi W. J., Zhou Z. L., Ping B. Y., Wang L. R., Liu J. G., Ma J., Du X. M.,
J. Zhu
. (2014). Association mapping for epistasis and environmental interaction of yield traits in 323 cotton cultivars under 9 different environments.
PLoS ONE
, 9(5):e95882.
Wei H. L., Wei L., Sun X. W., Zhu S. J.,
J. Zhu
. (2013). Systematic analysis and comparison of nucleotide-binding site disease resistance genes in a diploid cotton Gossypium raimondii.
PLoS ONE
, 8(8):e68435.
Zhou L.Y., Li R.Y., Fan L.J., Shi Y.W., Wang Z.H., Xie S.D., Gui Y.J., Ren X.L.,
J. Zhu
. (2013). Mapping epistasis and environment & QTX interaction based on four-omics genotypes for the detected QTX loci controlling complex traits in tobacco.
The Crop Journal
, 1(2): 151-159.
Wei H. L., Li W., Sun X.W., Zhu S.J., J. Zhu. (2013). Systematic analysis and comparison of nucleotide-binding site disease resistance genes in a diploid cotton Gossypium raimondii.
PLoS ONE
, 8(8):e68435.
Zhu Z. X., X. R. Tong, Z. H. Zhu, M. M. Liang, W. Y. Cui, K. K. Su, M. D. Li,
J. Zhu
. (2013). Development of GMDR-GPU for gene-gene interaction analysis and its application to WTCCC GWAS data for type 2 diabetes.
PLoS ONE
, 8(4) e61943.
Xu L. F., W. L. Ding, M. Henke, W. Kurth,
J. Zhu
and G. B. Sorlin. (2012). Simulating Superior Genotypes for Plant Height based on QTLs: Towards Virtual Breeding of Rice. IEEE 4th International Symposium on Plant Growth Modeling, Simulation, Visualization and Applications.
Xu H. M.
and
J. Zhu
. (2012). Statistical approaches in QTL mapping and molecular breeding for complex traits. 57 (21), Chinese Science Bulletin, 57 (21), 2637-2644.
Chen G. B., Z. X. Zhu, F. T. Zhang, and
J. Zhu
. (2012). Quantitative genetic analysis station for the genetic analysis of complex traits. Chinese Science Bulletin, 57 (21), 2721-2726.
Yang D. G., C. Y. Ye, X. F. Ma, Z. H. Zhu, X. J. Zhou, H. F. Wang, Q. Q. Meng, X. Y. Pei, S. X. Yu, and
J. Zhu
. (2012). A new approach to dissecting complex traits by combining quantitative trait transcript (QTT) mapping and diallel cross analysis.
Chinese Science Bulletin
, 57 (21), 2695-2700.
Zhu Z. H., C. H. Zhang, X. S. Wang, M. N. Cook, R. Williams, L. Lu, and
J. Zhu
. (2012). Dissecting anxiety-related QTLs in mice by univariate and multivariate mapping.
Chinese Science Bulletin
, 57 (21), 2727-2732.
Xu L., M. Henke,
J. Zhu
, W. Kurth, and G. Buck-Sorlin. (2011). A functional-structural model of rice linking quantitative genetic information with morphological development and physiological processes. (2011).
Annals of Botany
, 107 (5), 817-828.
Chen G. P., Y. Xu,
H. M. Xu
, M. D. Li,
J. Zhu
, and X. Y. Lou. (2011). Practical and theoretical considerations in study design for detecting gene-gene interactions using MDR and GMDR approaches.
PLoS ONE
, 6(2):e16981.
Zheng, W. J., J. Yang, and
J. Zhu
. (2010). QTLNetworkR: an interactive R package for QTL visualization.
Journal of Zhejiang University-Science B
, 11(7):512-515.
Liu, H. L.,
J. Zhu
. (2010). Analysis of the 3' ends of tRNA as the cause of insertion sites of foreign DNA in Prochlorococcus.
Journal of Zhejiang University-Science B
, 11(9):708-718.
Wu, J. X., O. A. Gutierrez, J. N. Jenkins, J. C. McCarty, and
J. Zhu
. (2009). Quantitative analysis and QTL mapping for agronomic and fiber traits in an RI population of upland cotton.
EUPHYTICA
, 165(2): 231-245.
Yang, J., Y. Y. Zou, and
J. Zhu
. (2009). Identifying differentially expressed genes in human acute leukemia and mouse brain microarray datasets utilizing QTModel.
Functional & Integrative Genomics
, 9(1):59-66.
Zhang, W. Y.,
H. M. Xu
, and
J. Zhu
. (2009). Index selection on seed traits under direct, cytoplasmic and maternal effects in multiple environments.
Journal of Genetics and Genomics
, 36(1):41-4.
Xia, Z., Z. H.
Zhu, J
. Zhu, and R. H. Zhou. (2009). Recognition mechanism of siRNA by Viral p19 suppressor of RNA silencing: A molecular dynamics study.
Biophysical Journal
, 96:1761-1769.
Weir, B. S, W. G. Hill,
J. Zhu
, and Z. B. Zeng. (2009). The third international conference of quantitative genetics.
Genetica
, 136(2): 211-212.
Gong, Y. G., C. N. Wue, Q. H. Xing, X. Z. Zhao,
J. Zhu
, and L. He. (2009). A two-method meta-analysis of Neuregulin 1(NRG1) association and heterogeneity in schizophrenia.
Schizophrenia Research
, 111(1-3): 109-114.
Xia, Z., G. L. Jin,
J. Zhu
, and R. H. Zhou. (2009). Using a mutual information based site transition network to map the genetic evolution of influenza A/H3N2 virus.
Bioinformatics
, 25(18): 2309-2317.
Han, L, D.,
H. M. Xu
,
J. Zhu
, and X, Y, Lou, (2008). Analysis of genetic effects of nuclear-cytoplasmic interaction on quantitative traits: Genetic models for seed traits of plants.
Theoretical and Applied Genetics
, 116(6): 769-776.
Hayat, Y., J. Yang,
H. M. Xu
, and
J. Zhu
. (2008). Influence of outliers on QTL mapping for complex traits.
Journal of Zhejiang University (SCIENCE) B
, 9(12): 931-937.
最后编辑:
2023年02月04日