Detail information of AT1G01100_circ_g.1
circRNA ID
AT1G01100_circ_g.1
Alias
ath_circ_000011
Organism
Arabidpsis thaliana
Position
chr1: 50699-50882 JBrowse»
Reference genome
TAIR10.38
Identification method
CIRCexplorer
Parent gene
Parent gene annotation
60S acidic ribosomal protein P1-1
Parent gene strand
-
Alternative splicing
NA
GTCAAAAGAAACGGTTCCAAAACCCTACTGACTAAAGCAAAGAGACCAATCAAGATTTAGAAAT
AGACAAGCAGGAGTCAAAGGAAAGATACataaaatacttgttcaattcctgaccaaataatact
ataccaaatccttatcactccataagaatcattttcactaagtttctaactatcaa
AGACAAGCAGGAGTCAAAGGAAAGATACataaaatacttgttcaattcctgaccaaataatact
ataccaaatccttatcactccataagaatcattttcactaagtttctaactatcaa
Support reads
1
Tissues
root
Genomic sequence
ATAAAATACTTGTTCAATTCCTGACCAAATAATACTATACCAAATCCTTATCACTCCATAAGAA
TCATTTTCACTAAGTTTCTAACTATCAAGTCAAAAGAAACGGTTCCAAAACCCTACTGACTAAA
GCAAAGAGACCAATCAAGATTTAGAAATAGACAAGCAGGAGTCAAAGGAAAGATAC
TCATTTTCACTAAGTTTCTAACTATCAAGTCAAAAGAAACGGTTCCAAAACCCTACTGACTAAA
GCAAAGAGACCAATCAAGATTTAGAAATAGACAAGCAGGAGTCAAAGGAAAGATAC
Number of exons covered
0
Conserved circRNAs
NA
Coding potential
N
Potential coding position
NA
Potential amino acid sequence
NA
Sponge-miRNAs
NA
circRNA-miRNA-mRNA network
References
Chu et al., 2017
Copyright©2017-2018 Institute of Crop Sciences / Institute of Bioinformatics, Zhejiang University.
Any questions or suggestions, please contact the Fan's lab, bioinplant@zju.edu.cn
For submittion, please click here. Last modified at 2020-04-30.
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