Detail information of AT1G01050_circ_g.2
circRNA ID
AT1G01050_circ_g.2
Alias
ath_circ_000004
Organism
Arabidpsis thaliana
Position
chr1: 31273-31420 JBrowse»
Reference genome
TAIR10.38
Identification method
SMALT, Segemehl
Parent gene
Parent gene annotation
Soluble inorganic pyrophosphatase 1
Parent gene strand
-
Alternative splicing
NA
ACATAGATGCTGCAGAAATCTTCTGAGGAGAAGCTTCAACGCCTCAGGGTGTGGAGAATGTATT
CAGCATAGAGgaagaaaaatgcagagataaaagtaatatcaattaggatcatatgcttcttatt
atcaatgaaaagtaacagaa
CAGCATAGAGgaagaaaaatgcagagataaaagtaatatcaattaggatcatatgcttcttatt
atcaatgaaaagtaacagaa
Support reads
2
Tissues
siliques and seeds
Genomic sequence
GAAGAAAAATGCAGAGATAAAAGTAATATCAATTAGGATCATATGCTTCTTATTATCAATGAAA
AGTAACAGAAACATAGATGCTGCAGAAATCTTCTGAGGAGAAGCTTCAACGCCTCAGGGTGTGG
AGAATGTATTCAGCATAGAG
AGTAACAGAAACATAGATGCTGCAGAAATCTTCTGAGGAGAAGCTTCAACGCCTCAGGGTGTGG
AGAATGTATTCAGCATAGAG
Number of exons covered
AT1G01050.2:1
AT1G01050.1:1
AT1G01050.1:1
Conserved circRNAs
NA
Coding potential
N
Potential coding position
NA
Potential amino acid sequence
NA
Sponge-miRNAs
NA
circRNA-miRNA-mRNA network
References
Lu et al., 2017
Copyright©2017-2018 Institute of Crop Sciences / Institute of Bioinformatics, Zhejiang University.
Any questions or suggestions, please contact the Fan's lab, bioinplant@zju.edu.cn
For submittion, please click here. Last modified at 2020-04-30.
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