Detail information of AT1G01260_circ_g.1
circRNA ID
AT1G01260_circ_g.1
Alias
ath_circ_000018
Organism
Arabidpsis thaliana
Position
chr1: 110451-110596 JBrowse»
Reference genome
TAIR10.38
Identification method
circRNA_finder, find_circ
Parent gene
Parent gene annotation
Transcription factor bHLH13
Parent gene strand
+
Alternative splicing
NA
CAAGAGATTAGATGCTTATCCGAATAATGGGAACAGGTTTATGTTTTCGAACCCAGGCACCAAC
AACAACACTaaccaccgcaacagcaacagcatagacagtttagagagaaactcacggttagaaa
aatggatgatagagctcc
AACAACACTaaccaccgcaacagcaacagcatagacagtttagagagaaactcacggttagaaa
aatggatgatagagctcc
Support reads
4
Tissues
inflorescences, whole_plant
Genomic sequence
AACCACCGCAACAGCAACAGCATAGACAGTTTAGAGAGAAACTCACGGTTAGAAAAATGGATGA
TAGAGCTCCCAAGAGATTAGATGCTTATCCGAATAATGGGAACAGGTTTATGTTTTCGAACCCA
GGCACCAACAACAACACT
TAGAGCTCCCAAGAGATTAGATGCTTATCCGAATAATGGGAACAGGTTTATGTTTTCGAACCCA
GGCACCAACAACAACACT
Number of exons covered
AT1G01260.3:1
AT1G01260.2:1
AT1G01260.1:1
AT1G01260.2:1
AT1G01260.1:1
Conserved circRNAs
NA
Coding potential
N
Potential coding position
NA
Potential amino acid sequence
NA
Sponge-miRNAs
NA
circRNA-miRNA-mRNA network
References
Chu et al., 2017
Copyright©2017-2018 Institute of Crop Sciences / Institute of Bioinformatics, Zhejiang University.
Any questions or suggestions, please contact the Fan's lab, bioinplant@zju.edu.cn
For submittion, please click here. Last modified at 2020-04-30.
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