The allele information of TE loci in each rice variety is provided here. You can retrieve the presence/absence status of large sets of loci in rice population.
TE sites e.g. Os_TE_1108
Frequency range ~ e.g. 0.01~0.1
Chromosome All Chr1 Chr2 Chr3 Chr4 Chr5 Chr6 Chr7 Chr8 Chr9 Chr10 Chr11 Chr12 ChrUn ChrSy
Region ~ Mb Kb bp e.g. 1000~2000
Transposon family e.g. mPing
Transponson length ~ bp e.g. 200~600
Accession ID e.g. CX140; B057; IRIS_313-10164
Country e.g. China
Subpopulation All Indica Japonica Temperate japonica Tropical japonica Aus/boro Basmati/sadri Intermediate type
Variety name e.g. Nipponbare
Designation e.g. COLOMBIA;
Biosample e.g. SAMEA2567475