Here providing the information on 60,743 TE loci. You are allowed to extract TE loci for a given chromosome region or TE characteristic.
Here are 19,160 gene-related TE loci. You can find whether the genes of interest carry TE insertions.
e.g. Os_TE_1108
~ e.g. 0.1~1
~ e.g. 1000~2000
e.g. mPing
~ bp e.g. 200~600
e.g. LOC_Os01g01390
e.g. OsSPL, OsMADS
e.g. Methyltransferase
Note:Because the entire dataset is too large, only a filtered subset is allowed to trigger 'Graphic View' below. For example, filling 'Methyltransferase' into 'Gene annotation', then clicking 'Filter' and 'Graphic View'. It often takes several seconds to load data, please wait patiently!
Note:Because the entire dataset is too large, only a filtered subset is allowed to trigger 'Graphic View' below. For example, filling 'mPing' into 'Transposon family', then clicking 'Filter' and 'Graphic View'. It often takes several seconds to load data, please wait patiently!
| ID | TE sites |
Chromosome | Start | End | TE Ori |
TE family |
TE Length |
Pop Freq |
RefGen | Description | Mates | Flanking Sequences |
|---|