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Name

WORDCOUNT

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Status The current release has 0 entries and was indexed 21-Sep-2004.
Creation date Completed 27th November 1998.
Description WORDCOUNT application details page

Counts words of a specified size in a DNA sequence

Displays all the words of the specified length with the number oftimes it occurs.
Literature None.
WWW www.hgmp.mrc.ac.uk/Software/EMBOSS/Apps/wordcount.html
Ftp The latest version of the EMBOSS package is available on ftp://ftp.uk.embnet.org/pub/EMBOSS/
Contact This application was written by Ian Longden (il@sanger.ac.uk) InformaticsDivision, The Sanger Centre, Wellcome Trust Genome Campus, Hinxton,Cambridge, CB10 1SA, UK.
See also
BTWISTED Calculates the twisting in a B-DNA sequence
CHAOS Create a chaos game representation plot for a sequence
COMPSEQN Counts the composition of dimer/trimer/etc words in a sequence
DAN Calculates DNA RNA/DNA melting temperature
FREAKN Residue/base frequency table or plot
ISOCHORE Plots isochores in large DNA sequences
Data-fields in SRS
Field Name
Short Name
Type
No. of Keys
No. of Entry References
Indexing Date
Status
ID id id 0 0   not indexed
JobName jnm index 0 0   not indexed
Loaders
EMBOSSDNASIMPLESEQ
EMBOSSPROTSIMPLESEQ
SRS Description Structure ( srsgen.i , srsdb.i , href.i )
Syntax
Information
SRS Release 7.1.3    Copyright © 1997-2003 LION bioscience AG. All Rights Reserved. Terms of Use Feedback