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Name

SILENT

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Status The current release has 0 entries and was indexed 19-Sep-2004.
Creation date Written (Aug 2000) - Alan Bleasby.
Description SILENT application details page

Silent mutation restriction enzyme scan

silent does a scan of a nucleic acid sequence for silent mutationrestriction enzyme sites.

silent finds positions in a sequence where a point mutation couldbe made to introduce a specified restriction enzyme recognition sitewithout changing the translation.

Several restriction enzyme can be specified.

Literature None.
WWW www.hgmp.mrc.ac.uk/Software/EMBOSS/Apps/silent.html
Ftp The latest version of the EMBOSS package is available on ftp://ftp.uk.embnet.org/pub/EMBOSS/
Contact This application was written by Alan Bleasby (ableasby@hgmp.mrc.ac.uk)
See also
RECODER Remove restriction sites but maintain the same translation
REMAP Display a sequence with restriction cut sites, translation etc..
RESTOVER Finds restriction enzymes that produce a specific overhang
RESTRICT Finds restriction enzyme cleavage sites
SHOWSEQP Display a sequence with features, translation etc..
Data-fields in SRS
Field Name
Short Name
Type
No. of Keys
No. of Entry References
Indexing Date
Status
ID id id 0 0   not indexed
JobName jnm index 0 0   not indexed
Loaders
EMBOSSDNASIMPLESEQ
EMBOSSPROTSIMPLESEQ
SRS Description Structure ( srsgen.i , srsdb.i , href.i )
Syntax
Information
SRS Release 7.1.3    Copyright © 1997-2003 LION bioscience AG. All Rights Reserved. Terms of Use Feedback